RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
CAPRIN1-213ENST00000533562 PROSER2Q86WR7 435 aaPredicted RBP18.82■□□□□ 0.6
CAPRIN1-213ENST00000533562 RIMS2Q9UQ26 1411 aa18.81■□□□□ 0.6
CAPRIN1-213ENST00000533562 IQGAP3Q86VI3 1631 aa18.81■□□□□ 0.6
CAPRIN1-213ENST00000533562 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
CAPRIN1-213ENST00000533562 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
CAPRIN1-213ENST00000533562 ZFYVE9O95405 1425 aa18.79■□□□□ 0.6
CAPRIN1-213ENST00000533562 E9PCH4 1651 aa18.79■□□□□ 0.6
CAPRIN1-213ENST00000533562 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
CAPRIN1-213ENST00000533562 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
CAPRIN1-213ENST00000533562 TBX22Q9Y458 520 aa18.78■□□□□ 0.6
CAPRIN1-213ENST00000533562 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
CAPRIN1-213ENST00000533562 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
CAPRIN1-213ENST00000533562 MYO5BQ9ULV0 1848 aa18.74■□□□□ 0.59
CAPRIN1-213ENST00000533562 SOCS7O14512 581 aa18.74■□□□□ 0.59
CAPRIN1-213ENST00000533562 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
CAPRIN1-213ENST00000533562 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
CAPRIN1-213ENST00000533562 NKTRP30414 1462 aaKnown RBP18.72■□□□□ 0.59
CAPRIN1-213ENST00000533562 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
CAPRIN1-213ENST00000533562 NAIPQ13075 1403 aa18.71■□□□□ 0.59
CAPRIN1-213ENST00000533562 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
CAPRIN1-213ENST00000533562 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
CAPRIN1-213ENST00000533562 MSH6P52701 1360 aa18.69■□□□□ 0.58
CAPRIN1-213ENST00000533562 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
CAPRIN1-213ENST00000533562 NWD1Q149M9 1564 aa18.68■□□□□ 0.58
CAPRIN1-213ENST00000533562 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
CAPRIN1-213ENST00000533562 SLAIN2Q9P270 581 aa18.67■□□□□ 0.58
CAPRIN1-213ENST00000533562 CHD2O14647 1828 aaKnown RBP18.67■□□□□ 0.58
CAPRIN1-213ENST00000533562 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
CAPRIN1-213ENST00000533562 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
CAPRIN1-213ENST00000533562 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
CAPRIN1-213ENST00000533562 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
CAPRIN1-213ENST00000533562 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
CAPRIN1-213ENST00000533562 SPHKAPQ2M3C7 1700 aa18.64■□□□□ 0.57
CAPRIN1-213ENST00000533562 DIP2AQ14689 1571 aa18.64■□□□□ 0.57
CAPRIN1-213ENST00000533562 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
CAPRIN1-213ENST00000533562 AMOTL2Q9Y2J4 779 aa18.63■□□□□ 0.57
CAPRIN1-213ENST00000533562 C19orf44Q9H6X5 657 aa18.62■□□□□ 0.57
CAPRIN1-213ENST00000533562 CADPS2Q86UW7 1296 aa18.61■□□□□ 0.57
CAPRIN1-213ENST00000533562 ATF3P18847 181 aa18.6■□□□□ 0.57
CAPRIN1-213ENST00000533562 TRPM2O94759 1503 aa18.59■□□□□ 0.57
CAPRIN1-213ENST00000533562 ROBO1Q9Y6N7 1651 aa18.57■□□□□ 0.56
CAPRIN1-213ENST00000533562 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
CAPRIN1-213ENST00000533562 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
CAPRIN1-213ENST00000533562 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
CAPRIN1-213ENST00000533562 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
CAPRIN1-213ENST00000533562 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
CAPRIN1-213ENST00000533562 KIF1BO60333 1816 aa18.53■□□□□ 0.56
CAPRIN1-213ENST00000533562 METP08581 1390 aa18.53■□□□□ 0.56
CAPRIN1-213ENST00000533562 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.56
CAPRIN1-213ENST00000533562 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
CAPRIN1-213ENST00000533562 NRXN3Q9Y4C0 1643 aa18.5■□□□□ 0.55
CAPRIN1-213ENST00000533562 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
CAPRIN1-213ENST00000533562 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
CAPRIN1-213ENST00000533562 FOXD1Q16676 465 aa18.49■□□□□ 0.55
CAPRIN1-213ENST00000533562 JCADQ9P266 1359 aa18.49■□□□□ 0.55
CAPRIN1-213ENST00000533562 DCCP43146 1447 aa18.48■□□□□ 0.55
CAPRIN1-213ENST00000533562 RGS17Q9UGC6 210 aaPredicted RBP18.47■□□□□ 0.55
CAPRIN1-213ENST00000533562 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
CAPRIN1-213ENST00000533562 BRINP3Q76B58 766 aa18.45■□□□□ 0.54
CAPRIN1-213ENST00000533562 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
CAPRIN1-213ENST00000533562 XRN1Q8IZH2 1706 aaKnown RBP18.45■□□□□ 0.54
CAPRIN1-213ENST00000533562 RGL3Q3MIN7 710 aa18.43■□□□□ 0.54
CAPRIN1-213ENST00000533562 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
CAPRIN1-213ENST00000533562 SETD5Q9C0A6 1442 aa18.41■□□□□ 0.54
CAPRIN1-213ENST00000533562 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
CAPRIN1-213ENST00000533562 COL16A1Q07092 1604 aaPredicted RBP18.39■□□□□ 0.53
CAPRIN1-213ENST00000533562 AHDC1Q5TGY3 1603 aaPredicted RBP18.39■□□□□ 0.53
CAPRIN1-213ENST00000533562 MST1RQ04912 1400 aa18.39■□□□□ 0.53
CAPRIN1-213ENST00000533562 MEX3CQ5U5Q3 659 aaKnown RBP18.38■□□□□ 0.53
CAPRIN1-213ENST00000533562 POTEAQ6S8J7 498 aa18.38■□□□□ 0.53
CAPRIN1-213ENST00000533562 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
CAPRIN1-213ENST00000533562 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
CAPRIN1-213ENST00000533562 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
CAPRIN1-213ENST00000533562 ADGRF5Q8IZF2 1346 aa18.37■□□□□ 0.53
CAPRIN1-213ENST00000533562 ROBO2Q9HCK4 1378 aa18.37■□□□□ 0.53
CAPRIN1-213ENST00000533562 PPLO60437 1756 aa18.37■□□□□ 0.53
CAPRIN1-213ENST00000533562 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
CAPRIN1-213ENST00000533562 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
CAPRIN1-213ENST00000533562 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
CAPRIN1-213ENST00000533562 SETD1AO15047 1707 aaKnown RBP18.33■□□□□ 0.52
CAPRIN1-213ENST00000533562 ZNF772Q68DY9 489 aaPredicted RBP18.32■□□□□ 0.52
CAPRIN1-213ENST00000533562 STK26Q9P289 416 aa18.32■□□□□ 0.52
CAPRIN1-213ENST00000533562 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
CAPRIN1-213ENST00000533562 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
CAPRIN1-213ENST00000533562 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
CAPRIN1-213ENST00000533562 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
CAPRIN1-213ENST00000533562 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
CAPRIN1-213ENST00000533562 NALCNQ8IZF0 1738 aa18.31■□□□□ 0.52
CAPRIN1-213ENST00000533562 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
CAPRIN1-213ENST00000533562 SHPRHQ149N8 1683 aa18.3■□□□□ 0.52
CAPRIN1-213ENST00000533562 TMEM132EQ6IEE7 984 aa18.29■□□□□ 0.52
CAPRIN1-213ENST00000533562 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
CAPRIN1-213ENST00000533562 LRP6O75581 1613 aa18.28■□□□□ 0.52
CAPRIN1-213ENST00000533562 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
CAPRIN1-213ENST00000533562 ABCC11Q96J66 1382 aa18.28■□□□□ 0.52
CAPRIN1-213ENST00000533562 HRCP23327 699 aa18.27■□□□□ 0.52
CAPRIN1-213ENST00000533562 WAPLQ7Z5K2 1190 aa18.27■□□□□ 0.52
CAPRIN1-213ENST00000533562 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.51
CAPRIN1-213ENST00000533562 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms