RNA–Protein interactions for RNA: ENST00000533194.5

CCT3-216, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-216ENST00000533194 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
CCT3-216ENST00000533194 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
CCT3-216ENST00000533194 NOS1P29475 1434 aa11.14□□□□□ -0.63
CCT3-216ENST00000533194 JCADQ9P266 1359 aa11.14□□□□□ -0.63
CCT3-216ENST00000533194 KDM5AP29375 1690 aaKnown RBP11.14□□□□□ -0.63
CCT3-216ENST00000533194 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
CCT3-216ENST00000533194 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
CCT3-216ENST00000533194 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
CCT3-216ENST00000533194 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
CCT3-216ENST00000533194 RIMS2Q9UQ26 1411 aa11.11□□□□□ -0.63
CCT3-216ENST00000533194 ATF3P18847 181 aa11.11□□□□□ -0.63
CCT3-216ENST00000533194 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
CCT3-216ENST00000533194 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
CCT3-216ENST00000533194 TBX22Q9Y458 520 aa11.1□□□□□ -0.63
CCT3-216ENST00000533194 NWD1Q149M9 1564 aa11.1□□□□□ -0.63
CCT3-216ENST00000533194 TET3O43151 1660 aa11.1□□□□□ -0.63
CCT3-216ENST00000533194 ROBO1Q9Y6N7 1651 aa11.1□□□□□ -0.63
CCT3-216ENST00000533194 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
CCT3-216ENST00000533194 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
CCT3-216ENST00000533194 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
CCT3-216ENST00000533194 ZFYVE9O95405 1425 aa11.08□□□□□ -0.64
CCT3-216ENST00000533194 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
CCT3-216ENST00000533194 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
CCT3-216ENST00000533194 PIK3R4Q99570 1358 aa11.06□□□□□ -0.64
CCT3-216ENST00000533194 NUTM2DQ5VT03 806 aaPredicted RBP11.05□□□□□ -0.64
CCT3-216ENST00000533194 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
CCT3-216ENST00000533194 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
CCT3-216ENST00000533194 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
CCT3-216ENST00000533194 ZNF326Q5BKZ1 582 aaKnown RBP11.03□□□□□ -0.64
CCT3-216ENST00000533194 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
CCT3-216ENST00000533194 AMOTL2Q9Y2J4 779 aa11.03□□□□□ -0.64
CCT3-216ENST00000533194 NUP155O75694 1391 aa11.03□□□□□ -0.64
CCT3-216ENST00000533194 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
CCT3-216ENST00000533194 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
CCT3-216ENST00000533194 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
CCT3-216ENST00000533194 ITGAEP38570 1179 aa11.02□□□□□ -0.65
CCT3-216ENST00000533194 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
CCT3-216ENST00000533194 TRPM2O94759 1503 aa11.01□□□□□ -0.65
CCT3-216ENST00000533194 RXRBP28702 533 aa11.01□□□□□ -0.65
CCT3-216ENST00000533194 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
CCT3-216ENST00000533194 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
CCT3-216ENST00000533194 BRINP3Q76B58 766 aa11□□□□□ -0.65
CCT3-216ENST00000533194 GCC2Q8IWJ2 1684 aa11□□□□□ -0.65
CCT3-216ENST00000533194 DCCP43146 1447 aa11□□□□□ -0.65
CCT3-216ENST00000533194 UNC13BO14795 1591 aa10.99□□□□□ -0.65
CCT3-216ENST00000533194 COL16A1Q07092 1604 aaPredicted RBP10.99□□□□□ -0.65
CCT3-216ENST00000533194 AHDC1Q5TGY3 1603 aaPredicted RBP10.98□□□□□ -0.65
CCT3-216ENST00000533194 LRP6O75581 1613 aa10.98□□□□□ -0.65
CCT3-216ENST00000533194 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
CCT3-216ENST00000533194 AFF2P51816 1311 aa10.96□□□□□ -0.65
CCT3-216ENST00000533194 UPF1Q92900 1129 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCT3-216ENST00000533194 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
CCT3-216ENST00000533194 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
CCT3-216ENST00000533194 C8orf37Q96NL8 207 aa10.95□□□□□ -0.66
CCT3-216ENST00000533194 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
CCT3-216ENST00000533194 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
CCT3-216ENST00000533194 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.94□□□□□ -0.66
CCT3-216ENST00000533194 E9PCH4 1651 aa10.94□□□□□ -0.66
CCT3-216ENST00000533194 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
CCT3-216ENST00000533194 SETD5Q9C0A6 1442 aa10.93□□□□□ -0.66
CCT3-216ENST00000533194 SETD1AO15047 1707 aaKnown RBP10.93□□□□□ -0.66
CCT3-216ENST00000533194 SHPRHQ149N8 1683 aa10.93□□□□□ -0.66
CCT3-216ENST00000533194 MST1RQ04912 1400 aa10.92□□□□□ -0.66
CCT3-216ENST00000533194 SETBP1Q9Y6X0 1596 aa10.92□□□□□ -0.66
CCT3-216ENST00000533194 RBM6P78332 1123 aaKnown RBP10.92□□□□□ -0.66
CCT3-216ENST00000533194 FOXD1Q16676 465 aa10.92□□□□□ -0.66
CCT3-216ENST00000533194 NGLY1Q96IV0 654 aa10.92□□□□□ -0.66
CCT3-216ENST00000533194 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
CCT3-216ENST00000533194 METP08581 1390 aa10.91□□□□□ -0.66
CCT3-216ENST00000533194 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
CCT3-216ENST00000533194 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
CCT3-216ENST00000533194 QTRT2Q9H974 415 aaKnown RBP10.91□□□□□ -0.66
CCT3-216ENST00000533194 MYO5BQ9ULV0 1848 aa10.9□□□□□ -0.66
CCT3-216ENST00000533194 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.67
CCT3-216ENST00000533194 PPARGC1BQ86YN6 1023 aaKnown RBP10.88□□□□□ -0.67
CCT3-216ENST00000533194 XRN1Q8IZH2 1706 aaKnown RBP10.88□□□□□ -0.67
CCT3-216ENST00000533194 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
CCT3-216ENST00000533194 ATAD2Q6PL18 1390 aa10.88□□□□□ -0.67
CCT3-216ENST00000533194 USP21Q9UK80 565 aa10.87□□□□□ -0.67
CCT3-216ENST00000533194 TRPC5Q9UL62 973 aaPredicted RBP10.87□□□□□ -0.67
CCT3-216ENST00000533194 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
CCT3-216ENST00000533194 RGS12O14924 1447 aa10.86□□□□□ -0.67
CCT3-216ENST00000533194 PTCH1Q13635 1447 aa10.86□□□□□ -0.67
CCT3-216ENST00000533194 RPGRIP1LQ68CZ1 1315 aa10.85□□□□□ -0.67
CCT3-216ENST00000533194 SPHKAPQ2M3C7 1700 aa10.85□□□□□ -0.67
CCT3-216ENST00000533194 NPHP3Q7Z494 1330 aa10.84□□□□□ -0.67
CCT3-216ENST00000533194 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
CCT3-216ENST00000533194 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
CCT3-216ENST00000533194 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
CCT3-216ENST00000533194 NRXN3Q9Y4C0 1643 aa10.84□□□□□ -0.67
CCT3-216ENST00000533194 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
CCT3-216ENST00000533194 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
CCT3-216ENST00000533194 LRPPRCP42704 1394 aaKnown RBP10.83□□□□□ -0.68
CCT3-216ENST00000533194 ROBO2Q9HCK4 1378 aa10.83□□□□□ -0.68
CCT3-216ENST00000533194 ESCO1Q5FWF5 840 aa10.83□□□□□ -0.68
CCT3-216ENST00000533194 ORAI2Q96SN7 254 aa10.83□□□□□ -0.68
CCT3-216ENST00000533194 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
CCT3-216ENST00000533194 CLTCL1P53675 1640 aa10.82□□□□□ -0.68
CCT3-216ENST00000533194 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
CCT3-216ENST00000533194 NAIPQ13075 1403 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms