RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 NUTM2DQ5VT03 806 aaPredicted RBP19.68■□□□□ 0.74
SSH3-210ENST00000532881 TRPM2O94759 1503 aa19.68■□□□□ 0.74
SSH3-210ENST00000532881 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
SSH3-210ENST00000532881 PDE4AP27815 886 aa19.67■□□□□ 0.74
SSH3-210ENST00000532881 TNNT2P45379 298 aaPredicted RBP19.67■□□□□ 0.74
SSH3-210ENST00000532881 CARD14Q9BXL6 1004 aa19.67■□□□□ 0.74
SSH3-210ENST00000532881 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
SSH3-210ENST00000532881 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
SSH3-210ENST00000532881 PTPRTO14522 1441 aa19.67■□□□□ 0.74
SSH3-210ENST00000532881 SPHKAPQ2M3C7 1700 aa19.66■□□□□ 0.74
SSH3-210ENST00000532881 IQGAP1P46940 1657 aa19.66■□□□□ 0.74
SSH3-210ENST00000532881 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
SSH3-210ENST00000532881 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
SSH3-210ENST00000532881 APAF1O14727 1248 aa19.65■□□□□ 0.74
SSH3-210ENST00000532881 ATP7AQ04656 1500 aa19.65■□□□□ 0.74
SSH3-210ENST00000532881 ADGRL1O94910 1474 aa19.64■□□□□ 0.73
SSH3-210ENST00000532881 RTEL1-TNFRSF6BF6WH68 1400 aa19.64■□□□□ 0.73
SSH3-210ENST00000532881 ZMYM4Q5VZL5 1548 aa19.64■□□□□ 0.73
SSH3-210ENST00000532881 CFAP65Q6ZU64 1925 aaKnown RBP19.64■□□□□ 0.73
SSH3-210ENST00000532881 GGT6Q6P531 493 aa19.64■□□□□ 0.73
SSH3-210ENST00000532881 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
SSH3-210ENST00000532881 KANK1Q14678 1352 aa19.64■□□□□ 0.73
SSH3-210ENST00000532881 TMEM132EQ6IEE7 984 aa19.63■□□□□ 0.73
SSH3-210ENST00000532881 TRAK1Q9UPV9 953 aa19.63■□□□□ 0.73
SSH3-210ENST00000532881 CEP152O94986 1710 aa19.63■□□□□ 0.73
SSH3-210ENST00000532881 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
SSH3-210ENST00000532881 CDCA8Q53HL2 280 aa19.6■□□□□ 0.73
SSH3-210ENST00000532881 ASXL1Q8IXJ9 1541 aa19.59■□□□□ 0.73
SSH3-210ENST00000532881 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
SSH3-210ENST00000532881 BACH2Q9BYV9 841 aa19.59■□□□□ 0.73
SSH3-210ENST00000532881 BCAR3O75815 825 aa19.59■□□□□ 0.73
SSH3-210ENST00000532881 MYOM1P52179 1685 aa19.59■□□□□ 0.73
SSH3-210ENST00000532881 NEUROD2Q15784 382 aa19.58■□□□□ 0.73
SSH3-210ENST00000532881 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
SSH3-210ENST00000532881 DEKP35659 375 aaKnown RBP19.58■□□□□ 0.72
SSH3-210ENST00000532881 TET3O43151 1660 aa19.58■□□□□ 0.72
SSH3-210ENST00000532881 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
SSH3-210ENST00000532881 ERVK-7P63135 1459 aa19.57■□□□□ 0.72
SSH3-210ENST00000532881 DEPDC5O75140 1603 aa19.57■□□□□ 0.72
SSH3-210ENST00000532881 SLC12A5Q9H2X9 1139 aa19.57■□□□□ 0.72
SSH3-210ENST00000532881 LAS1LQ9Y4W2 734 aaKnown RBP19.57■□□□□ 0.72
SSH3-210ENST00000532881 INO80Q9ULG1 1556 aaPredicted RBP19.56■□□□□ 0.72
SSH3-210ENST00000532881 SLFN5Q08AF3 891 aa19.55■□□□□ 0.72
SSH3-210ENST00000532881 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
SSH3-210ENST00000532881 MROH1Q8NDA8 1641 aa19.55■□□□□ 0.72
SSH3-210ENST00000532881 SYNMO15061 1565 aa19.55■□□□□ 0.72
SSH3-210ENST00000532881 NOS1P29475 1434 aa19.55■□□□□ 0.72
SSH3-210ENST00000532881 ABCA6Q8N139 1617 aa19.55■□□□□ 0.72
SSH3-210ENST00000532881 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
SSH3-210ENST00000532881 EIF3AQ14152 1382 aaKnown RBP19.54■□□□□ 0.72
SSH3-210ENST00000532881 SAFB2Q14151 953 aaKnown RBP eCLIP19.53■□□□□ 0.72
SSH3-210ENST00000532881 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
SSH3-210ENST00000532881 VWDEQ8N2E2 1590 aa19.52■□□□□ 0.72
SSH3-210ENST00000532881 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
SSH3-210ENST00000532881 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
SSH3-210ENST00000532881 RAPGEF3O95398 923 aa19.5■□□□□ 0.71
SSH3-210ENST00000532881 RGS3P49796 1198 aa19.5■□□□□ 0.71
SSH3-210ENST00000532881 INSRP06213 1382 aa19.5■□□□□ 0.71
SSH3-210ENST00000532881 KDM5AP29375 1690 aaKnown RBP19.49■□□□□ 0.71
SSH3-210ENST00000532881 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
SSH3-210ENST00000532881 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
SSH3-210ENST00000532881 KIDINS220Q9ULH0 1771 aa19.49■□□□□ 0.71
SSH3-210ENST00000532881 KDM2BQ8NHM5 1336 aa19.49■□□□□ 0.71
SSH3-210ENST00000532881 ARAP3Q8WWN8 1544 aa19.49■□□□□ 0.71
SSH3-210ENST00000532881 CENPJQ9HC77 1338 aaPredicted RBP19.48■□□□□ 0.71
SSH3-210ENST00000532881 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
SSH3-210ENST00000532881 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
SSH3-210ENST00000532881 MS4A1P11836 297 aa19.45■□□□□ 0.7
SSH3-210ENST00000532881 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
SSH3-210ENST00000532881 TRMT2AQ8IZ69 625 aaKnown RBP19.45■□□□□ 0.7
SSH3-210ENST00000532881 KIF1BO60333 1816 aa19.45■□□□□ 0.7
SSH3-210ENST00000532881 NPATQ14207 1427 aa19.45■□□□□ 0.7
SSH3-210ENST00000532881 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
SSH3-210ENST00000532881 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSH3-210ENST00000532881 TNNQ9UQP3 1299 aa19.43■□□□□ 0.7
SSH3-210ENST00000532881 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
SSH3-210ENST00000532881 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
SSH3-210ENST00000532881 WWC1Q8IX03 1113 aa19.42■□□□□ 0.7
SSH3-210ENST00000532881 MYOM2P54296 1465 aa19.42■□□□□ 0.7
SSH3-210ENST00000532881 IGHDP01880 384 aa19.42■□□□□ 0.7
SSH3-210ENST00000532881 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
SSH3-210ENST00000532881 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
SSH3-210ENST00000532881 STK26Q9P289 416 aa19.41■□□□□ 0.7
SSH3-210ENST00000532881 C14orf93Q9H972 538 aaKnown RBP19.41■□□□□ 0.7
SSH3-210ENST00000532881 CABP2Q9NPB3 220 aa19.41■□□□□ 0.7
SSH3-210ENST00000532881 MTHFSP49914 203 aa19.4■□□□□ 0.7
SSH3-210ENST00000532881 COG6Q9Y2V7 657 aa19.4■□□□□ 0.7
SSH3-210ENST00000532881 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
SSH3-210ENST00000532881 CENPQQ7L2Z9 268 aaPredicted RBP19.4■□□□□ 0.7
SSH3-210ENST00000532881 NKTRP30414 1462 aaKnown RBP19.4■□□□□ 0.7
SSH3-210ENST00000532881 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.39■□□□□ 0.69
SSH3-210ENST00000532881 KIAA1210Q9ULL0 1709 aa19.39■□□□□ 0.69
SSH3-210ENST00000532881 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
SSH3-210ENST00000532881 E9PSI1 815 aa19.39■□□□□ 0.69
SSH3-210ENST00000532881 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
SSH3-210ENST00000532881 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
SSH3-210ENST00000532881 IFT172Q9UG01 1749 aa19.38■□□□□ 0.69
SSH3-210ENST00000532881 C8orf34Q49A92 452 aa19.38■□□□□ 0.69
SSH3-210ENST00000532881 NEFMP07197 916 aa19.37■□□□□ 0.69
SSH3-210ENST00000532881 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms