RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PIP4K2BP78356 416 aa27.09■■□□□ 1.93
SMG1-203ENST00000532700 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
SMG1-203ENST00000532700 HFM1A2PYH4 1435 aa27.08■■□□□ 1.93
SMG1-203ENST00000532700 CLTCL1P53675 1640 aa27.08■■□□□ 1.93
SMG1-203ENST00000532700 NUTM2DQ5VT03 806 aaPredicted RBP27.06■■□□□ 1.92
SMG1-203ENST00000532700 CHGAP10645 457 aaKnown RBP27.05■■□□□ 1.92
SMG1-203ENST00000532700 SCAF1Q9H7N4 1312 aaKnown RBP27.05■■□□□ 1.92
SMG1-203ENST00000532700 PLEKHG1Q9ULL1 1385 aa27.04■■□□□ 1.92
SMG1-203ENST00000532700 CHD2O14647 1828 aaKnown RBP27.04■■□□□ 1.92
SMG1-203ENST00000532700 HSPA1LP34931 641 aa27.02■■□□□ 1.92
SMG1-203ENST00000532700 RBM33Q96EV2 1170 aaKnown RBP27.02■■□□□ 1.92
SMG1-203ENST00000532700 TOM1O60784 492 aa27.01■■□□□ 1.91
SMG1-203ENST00000532700 NRXN3Q9Y4C0 1643 aa27.01■■□□□ 1.91
SMG1-203ENST00000532700 TRPM2O94759 1503 aa27■■□□□ 1.91
SMG1-203ENST00000532700 ADAMTS13Q76LX8 1427 aa27■■□□□ 1.91
SMG1-203ENST00000532700 TMEM94Q12767 1356 aa26.98■■□□□ 1.91
SMG1-203ENST00000532700 KCNA6P17658 529 aa26.97■■□□□ 1.91
SMG1-203ENST00000532700 DISP3Q9P2K9 1392 aa26.97■■□□□ 1.91
SMG1-203ENST00000532700 NKTRP30414 1462 aaKnown RBP26.95■■□□□ 1.91
SMG1-203ENST00000532700 PPP1R15AO75807 674 aaPredicted RBP26.95■■□□□ 1.9
SMG1-203ENST00000532700 BCANQ96GW7 911 aa26.95■■□□□ 1.9
SMG1-203ENST00000532700 NEXMIFQ5QGS0 1516 aa26.92■■□□□ 1.9
SMG1-203ENST00000532700 KIF1BO60333 1816 aa26.92■■□□□ 1.9
SMG1-203ENST00000532700 DIP2AQ14689 1571 aa26.91■■□□□ 1.9
SMG1-203ENST00000532700 ILDR2Q71H61 639 aa26.9■■□□□ 1.9
SMG1-203ENST00000532700 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
SMG1-203ENST00000532700 PROSER2Q86WR7 435 aaPredicted RBP26.89■■□□□ 1.9
SMG1-203ENST00000532700 PTPRUQ92729 1446 aa26.89■■□□□ 1.89
SMG1-203ENST00000532700 SETBP1Q9Y6X0 1596 aa26.88■■□□□ 1.89
SMG1-203ENST00000532700 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.87■■□□□ 1.89
SMG1-203ENST00000532700 MED1Q15648 1581 aaPredicted RBP26.87■■□□□ 1.89
SMG1-203ENST00000532700 FOXD1Q16676 465 aa26.86■■□□□ 1.89
SMG1-203ENST00000532700 TBX22Q9Y458 520 aa26.86■■□□□ 1.89
SMG1-203ENST00000532700 ROBO1Q9Y6N7 1651 aa26.85■■□□□ 1.89
SMG1-203ENST00000532700 XRN1Q8IZH2 1706 aaKnown RBP26.85■■□□□ 1.89
SMG1-203ENST00000532700 HDGFP51858 240 aaKnown RBP26.83■■□□□ 1.89
SMG1-203ENST00000532700 SLC4A1APQ9BWU0 796 aaKnown RBP26.82■■□□□ 1.88
SMG1-203ENST00000532700 SETD1AO15047 1707 aaKnown RBP26.82■■□□□ 1.88
SMG1-203ENST00000532700 ZNF326Q5BKZ1 582 aaKnown RBP26.81■■□□□ 1.88
SMG1-203ENST00000532700 PPLO60437 1756 aa26.79■■□□□ 1.88
SMG1-203ENST00000532700 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.79■■□□□ 1.88
SMG1-203ENST00000532700 METP08581 1390 aa26.77■■□□□ 1.88
SMG1-203ENST00000532700 FAM135BQ49AJ0 1406 aa26.75■■□□□ 1.87
SMG1-203ENST00000532700 PIK3R4Q99570 1358 aa26.75■■□□□ 1.87
SMG1-203ENST00000532700 MSH6P52701 1360 aa26.73■■□□□ 1.87
SMG1-203ENST00000532700 AMOTL2Q9Y2J4 779 aa26.73■■□□□ 1.87
SMG1-203ENST00000532700 IFT172Q9UG01 1749 aa26.7■■□□□ 1.87
SMG1-203ENST00000532700 MPHOSPH9Q99550 1183 aa26.69■■□□□ 1.86
SMG1-203ENST00000532700 SETD5Q9C0A6 1442 aa26.69■■□□□ 1.86
SMG1-203ENST00000532700 NALCNQ8IZF0 1738 aa26.68■■□□□ 1.86
SMG1-203ENST00000532700 PHLPP1O60346 1717 aa26.67■■□□□ 1.86
SMG1-203ENST00000532700 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
SMG1-203ENST00000532700 NCOA3Q9Y6Q9 1424 aa26.66■■□□□ 1.86
SMG1-203ENST00000532700 SLAIN2Q9P270 581 aa26.65■■□□□ 1.86
SMG1-203ENST00000532700 RAB3GAP2Q9H2M9 1393 aa26.65■■□□□ 1.86
SMG1-203ENST00000532700 COL16A1Q07092 1604 aaPredicted RBP26.63■■□□□ 1.85
SMG1-203ENST00000532700 CCDC144AA2RUR9 1427 aa26.62■■□□□ 1.85
SMG1-203ENST00000532700 C14orf37Q86TY3 774 aa26.61■■□□□ 1.85
SMG1-203ENST00000532700 C19orf44Q9H6X5 657 aa26.58■■□□□ 1.85
SMG1-203ENST00000532700 ADGRF5Q8IZF2 1346 aa26.58■■□□□ 1.85
SMG1-203ENST00000532700 ASXL1Q8IXJ9 1541 aa26.57■■□□□ 1.84
SMG1-203ENST00000532700 RPGRIP1LQ68CZ1 1315 aa26.56■■□□□ 1.84
SMG1-203ENST00000532700 ROBO2Q9HCK4 1378 aa26.56■■□□□ 1.84
SMG1-203ENST00000532700 VGFO15240 615 aaPredicted RBP26.55■■□□□ 1.84
SMG1-203ENST00000532700 RGL3Q3MIN7 710 aa26.55■■□□□ 1.84
SMG1-203ENST00000532700 MST1RQ04912 1400 aa26.55■■□□□ 1.84
SMG1-203ENST00000532700 ADGRL3Q9HAR2 1447 aa26.55■■□□□ 1.84
SMG1-203ENST00000532700 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
SMG1-203ENST00000532700 DCCP43146 1447 aa26.53■■□□□ 1.84
SMG1-203ENST00000532700 PTCH1Q13635 1447 aa26.52■■□□□ 1.84
SMG1-203ENST00000532700 PRAG1Q86YV5 1406 aa26.51■■□□□ 1.83
SMG1-203ENST00000532700 ATF3P18847 181 aa26.51■■□□□ 1.83
SMG1-203ENST00000532700 CADPS2Q86UW7 1296 aa26.51■■□□□ 1.83
SMG1-203ENST00000532700 RGS17Q9UGC6 210 aaPredicted RBP26.5■■□□□ 1.83
SMG1-203ENST00000532700 SOCS7O14512 581 aa26.49■■□□□ 1.83
SMG1-203ENST00000532700 NHSL1Q5SYE7 1610 aa26.49■■□□□ 1.83
SMG1-203ENST00000532700 BRINP3Q76B58 766 aa26.48■■□□□ 1.83
SMG1-203ENST00000532700 PIK3C2GO75747 1445 aa26.47■■□□□ 1.83
SMG1-203ENST00000532700 PHF23Q9BUL5 403 aaPredicted RBP26.45■■□□□ 1.82
SMG1-203ENST00000532700 LRP6O75581 1613 aa26.45■■□□□ 1.82
SMG1-203ENST00000532700 SHPRHQ149N8 1683 aa26.44■■□□□ 1.82
SMG1-203ENST00000532700 KNDC1Q76NI1 1749 aa26.43■■□□□ 1.82
SMG1-203ENST00000532700 ANKRD30BQ9BXX2 1392 aa26.43■■□□□ 1.82
SMG1-203ENST00000532700 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
SMG1-203ENST00000532700 DDX17Q92841 729 aaKnown RBP26.42■■□□□ 1.82
SMG1-203ENST00000532700 JCADQ9P266 1359 aa26.41■■□□□ 1.82
SMG1-203ENST00000532700 TMEM132EQ6IEE7 984 aa26.4■■□□□ 1.82
SMG1-203ENST00000532700 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.82
SMG1-203ENST00000532700 MYOM2P54296 1465 aa26.38■■□□□ 1.81
SMG1-203ENST00000532700 PLEKHH1Q9ULM0 1364 aa26.38■■□□□ 1.81
SMG1-203ENST00000532700 TECPR2O15040 1411 aa26.38■■□□□ 1.81
SMG1-203ENST00000532700 STK26Q9P289 416 aa26.36■■□□□ 1.81
SMG1-203ENST00000532700 LAMC1P11047 1609 aa26.36■■□□□ 1.81
SMG1-203ENST00000532700 CDC42BPGQ6DT37 1551 aa26.35■■□□□ 1.81
SMG1-203ENST00000532700 LRPPRCP42704 1394 aaKnown RBP26.34■■□□□ 1.81
SMG1-203ENST00000532700 WAPLQ7Z5K2 1190 aa26.34■■□□□ 1.81
SMG1-203ENST00000532700 ACIN1Q9UKV3 1341 aaKnown RBP26.34■■□□□ 1.81
SMG1-203ENST00000532700 YTHDC2Q9H6S0 1430 aaKnown RBP26.32■■□□□ 1.8
SMG1-203ENST00000532700 POTEAQ6S8J7 498 aa26.32■■□□□ 1.8
SMG1-203ENST00000532700 CFAP70Q5T0N1 1121 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms