RNA–Protein interactions for RNA: ENST00000532632.1

TM9SF1-212, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-212ENST00000532632 HDGFP51858 240 aaKnown RBP22.52■■□□□ 1.2
TM9SF1-212ENST00000532632 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
TM9SF1-212ENST00000532632 ALKQ9UM73 1620 aa22.51■■□□□ 1.19
TM9SF1-212ENST00000532632 KCNA6P17658 529 aa22.5■■□□□ 1.19
TM9SF1-212ENST00000532632 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
TM9SF1-212ENST00000532632 TMEM131LA2VDJ0 1609 aa22.49■■□□□ 1.19
TM9SF1-212ENST00000532632 PLEKHG1Q9ULL1 1385 aa22.49■■□□□ 1.19
TM9SF1-212ENST00000532632 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
TM9SF1-212ENST00000532632 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.47■■□□□ 1.19
TM9SF1-212ENST00000532632 TMEM94Q12767 1356 aa22.47■■□□□ 1.19
TM9SF1-212ENST00000532632 PROSER2Q86WR7 435 aaPredicted RBP22.45■■□□□ 1.18
TM9SF1-212ENST00000532632 NKTRP30414 1462 aaKnown RBP22.45■■□□□ 1.18
TM9SF1-212ENST00000532632 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.18
TM9SF1-212ENST00000532632 NWD1Q149M9 1564 aa22.42■■□□□ 1.18
TM9SF1-212ENST00000532632 NAIPQ13075 1403 aa22.41■■□□□ 1.18
TM9SF1-212ENST00000532632 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
TM9SF1-212ENST00000532632 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
TM9SF1-212ENST00000532632 RBM33Q96EV2 1170 aaKnown RBP22.39■■□□□ 1.17
TM9SF1-212ENST00000532632 MED1Q15648 1581 aaPredicted RBP22.38■■□□□ 1.17
TM9SF1-212ENST00000532632 TBX22Q9Y458 520 aa22.38■■□□□ 1.17
TM9SF1-212ENST00000532632 SOCS7O14512 581 aa22.37■■□□□ 1.17
TM9SF1-212ENST00000532632 MSH6P52701 1360 aa22.37■■□□□ 1.17
TM9SF1-212ENST00000532632 SPHKAPQ2M3C7 1700 aa22.36■■□□□ 1.17
TM9SF1-212ENST00000532632 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
TM9SF1-212ENST00000532632 DIP2AQ14689 1571 aa22.34■■□□□ 1.17
TM9SF1-212ENST00000532632 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
TM9SF1-212ENST00000532632 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
TM9SF1-212ENST00000532632 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
TM9SF1-212ENST00000532632 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.17
TM9SF1-212ENST00000532632 PIK3R4Q99570 1358 aa22.31■■□□□ 1.16
TM9SF1-212ENST00000532632 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
TM9SF1-212ENST00000532632 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
TM9SF1-212ENST00000532632 CHD2O14647 1828 aaKnown RBP22.3■■□□□ 1.16
TM9SF1-212ENST00000532632 TRPM2O94759 1503 aa22.3■■□□□ 1.16
TM9SF1-212ENST00000532632 CLTCL1P53675 1640 aa22.27■■□□□ 1.16
TM9SF1-212ENST00000532632 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
TM9SF1-212ENST00000532632 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
TM9SF1-212ENST00000532632 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
TM9SF1-212ENST00000532632 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
TM9SF1-212ENST00000532632 SETBP1Q9Y6X0 1596 aa22.24■■□□□ 1.15
TM9SF1-212ENST00000532632 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
TM9SF1-212ENST00000532632 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
TM9SF1-212ENST00000532632 ATF3P18847 181 aa22.2■■□□□ 1.14
TM9SF1-212ENST00000532632 NEXMIFQ5QGS0 1516 aa22.2■■□□□ 1.14
TM9SF1-212ENST00000532632 NRXN3Q9Y4C0 1643 aa22.2■■□□□ 1.14
TM9SF1-212ENST00000532632 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
TM9SF1-212ENST00000532632 C19orf44Q9H6X5 657 aa22.19■■□□□ 1.14
TM9SF1-212ENST00000532632 KIF1BO60333 1816 aa22.17■■□□□ 1.14
TM9SF1-212ENST00000532632 METP08581 1390 aa22.16■■□□□ 1.14
TM9SF1-212ENST00000532632 XRN1Q8IZH2 1706 aaKnown RBP22.15■■□□□ 1.14
TM9SF1-212ENST00000532632 VGFO15240 615 aaPredicted RBP22.13■■□□□ 1.13
TM9SF1-212ENST00000532632 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.13■■□□□ 1.13
TM9SF1-212ENST00000532632 FOXD1Q16676 465 aa22.12■■□□□ 1.13
TM9SF1-212ENST00000532632 DCCP43146 1447 aa22.12■■□□□ 1.13
TM9SF1-212ENST00000532632 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
TM9SF1-212ENST00000532632 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
TM9SF1-212ENST00000532632 JCADQ9P266 1359 aa22.11■■□□□ 1.13
TM9SF1-212ENST00000532632 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
TM9SF1-212ENST00000532632 MPHOSPH9Q99550 1183 aa22.07■■□□□ 1.12
TM9SF1-212ENST00000532632 ADGRL3Q9HAR2 1447 aa22.06■■□□□ 1.12
TM9SF1-212ENST00000532632 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
TM9SF1-212ENST00000532632 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
TM9SF1-212ENST00000532632 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
TM9SF1-212ENST00000532632 AHDC1Q5TGY3 1603 aaPredicted RBP22.04■■□□□ 1.12
TM9SF1-212ENST00000532632 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
TM9SF1-212ENST00000532632 RGS17Q9UGC6 210 aaPredicted RBP22.03■■□□□ 1.12
TM9SF1-212ENST00000532632 MST1RQ04912 1400 aa22.02■■□□□ 1.12
TM9SF1-212ENST00000532632 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.12
TM9SF1-212ENST00000532632 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
TM9SF1-212ENST00000532632 PPLO60437 1756 aa22.01■■□□□ 1.11
TM9SF1-212ENST00000532632 ASXL1Q8IXJ9 1541 aa22.01■■□□□ 1.11
TM9SF1-212ENST00000532632 SETD1AO15047 1707 aaKnown RBP21.99■■□□□ 1.11
TM9SF1-212ENST00000532632 SPATA31A6Q5VVP1 1343 aa21.99■■□□□ 1.11
TM9SF1-212ENST00000532632 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
TM9SF1-212ENST00000532632 SPATA31E1Q6ZUB1 1445 aa21.98■■□□□ 1.11
TM9SF1-212ENST00000532632 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
TM9SF1-212ENST00000532632 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
TM9SF1-212ENST00000532632 PRAG1Q86YV5 1406 aa21.97■■□□□ 1.11
TM9SF1-212ENST00000532632 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
TM9SF1-212ENST00000532632 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
TM9SF1-212ENST00000532632 POTEAQ6S8J7 498 aa21.94■■□□□ 1.1
TM9SF1-212ENST00000532632 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
TM9SF1-212ENST00000532632 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
TM9SF1-212ENST00000532632 LRP6O75581 1613 aa21.92■■□□□ 1.1
TM9SF1-212ENST00000532632 C1orf167Q5SNV9 1468 aa21.92■■□□□ 1.1
TM9SF1-212ENST00000532632 NHSL1Q5SYE7 1610 aa21.9■■□□□ 1.1
TM9SF1-212ENST00000532632 NUTM2BA6NNL0 878 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-212ENST00000532632 NUTM2EB1AL46 878 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-212ENST00000532632 NUTM2AQ8IVF1 878 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-212ENST00000532632 LRRC59Q96AG4 307 aaKnown RBP21.89■■□□□ 1.09
TM9SF1-212ENST00000532632 STK26Q9P289 416 aa21.89■■□□□ 1.09
TM9SF1-212ENST00000532632 PIK3C2GO75747 1445 aa21.89■■□□□ 1.09
TM9SF1-212ENST00000532632 DDX17Q92841 729 aaKnown RBP21.88■■□□□ 1.09
TM9SF1-212ENST00000532632 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
TM9SF1-212ENST00000532632 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
TM9SF1-212ENST00000532632 ZNF772Q68DY9 489 aaPredicted RBP21.85■■□□□ 1.09
TM9SF1-212ENST00000532632 TMEM132EQ6IEE7 984 aa21.85■■□□□ 1.09
TM9SF1-212ENST00000532632 TECPR2O15040 1411 aa21.85■■□□□ 1.09
TM9SF1-212ENST00000532632 CDC42BPGQ6DT37 1551 aa21.84■■□□□ 1.09
TM9SF1-212ENST00000532632 ORAI2Q96SN7 254 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms