RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 SCAF1Q9H7N4 1312 aaKnown RBP28.79■■■□□ 2.2
SSH3-209ENST00000532600 HSPA1LP34931 641 aa28.79■■■□□ 2.2
SSH3-209ENST00000532600 PLEKHG1Q9ULL1 1385 aa28.77■■■□□ 2.2
SSH3-209ENST00000532600 NWD1Q149M9 1564 aa28.77■■■□□ 2.2
SSH3-209ENST00000532600 SENP3Q9H4L4 574 aaPredicted RBP28.77■■■□□ 2.2
SSH3-209ENST00000532600 SPHKAPQ2M3C7 1700 aa28.77■■■□□ 2.2
SSH3-209ENST00000532600 DISP3Q9P2K9 1392 aa28.76■■■□□ 2.2
SSH3-209ENST00000532600 KCNA6P17658 529 aa28.76■■■□□ 2.19
SSH3-209ENST00000532600 CHGAP10645 457 aaKnown RBP28.75■■■□□ 2.19
SSH3-209ENST00000532600 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
SSH3-209ENST00000532600 NUTM2DQ5VT03 806 aaPredicted RBP28.72■■■□□ 2.19
SSH3-209ENST00000532600 TMEM94Q12767 1356 aa28.71■■■□□ 2.19
SSH3-209ENST00000532600 ADAMTS13Q76LX8 1427 aa28.69■■■□□ 2.18
SSH3-209ENST00000532600 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
SSH3-209ENST00000532600 NKTRP30414 1462 aaKnown RBP28.68■■■□□ 2.18
SSH3-209ENST00000532600 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
SSH3-209ENST00000532600 RBM33Q96EV2 1170 aaKnown RBP28.68■■■□□ 2.18
SSH3-209ENST00000532600 BCANQ96GW7 911 aa28.68■■■□□ 2.18
SSH3-209ENST00000532600 CLTCL1P53675 1640 aa28.67■■■□□ 2.18
SSH3-209ENST00000532600 HDGFP51858 240 aaKnown RBP28.66■■■□□ 2.18
SSH3-209ENST00000532600 ILDR2Q71H61 639 aa28.66■■■□□ 2.18
SSH3-209ENST00000532600 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.66■■■□□ 2.18
SSH3-209ENST00000532600 TRPM2O94759 1503 aa28.65■■■□□ 2.18
SSH3-209ENST00000532600 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
SSH3-209ENST00000532600 TBX22Q9Y458 520 aa28.64■■■□□ 2.18
SSH3-209ENST00000532600 DIP2AQ14689 1571 aa28.61■■■□□ 2.17
SSH3-209ENST00000532600 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
SSH3-209ENST00000532600 TRIM52Q96A61 297 aa28.57■■■□□ 2.16
SSH3-209ENST00000532600 MED1Q15648 1581 aaPredicted RBP28.57■■■□□ 2.16
SSH3-209ENST00000532600 NEXMIFQ5QGS0 1516 aa28.55■■■□□ 2.16
SSH3-209ENST00000532600 PTPRUQ92729 1446 aa28.55■■■□□ 2.16
SSH3-209ENST00000532600 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
SSH3-209ENST00000532600 FAM135BQ49AJ0 1406 aa28.53■■■□□ 2.16
SSH3-209ENST00000532600 PIK3R4Q99570 1358 aa28.52■■■□□ 2.16
SSH3-209ENST00000532600 KIF1BO60333 1816 aa28.51■■■□□ 2.15
SSH3-209ENST00000532600 ROBO1Q9Y6N7 1651 aa28.51■■■□□ 2.15
SSH3-209ENST00000532600 ZNF326Q5BKZ1 582 aaKnown RBP28.5■■■□□ 2.15
SSH3-209ENST00000532600 SLC4A1APQ9BWU0 796 aaKnown RBP28.5■■■□□ 2.15
SSH3-209ENST00000532600 MSH6P52701 1360 aa28.48■■■□□ 2.15
SSH3-209ENST00000532600 XRN1Q8IZH2 1706 aaKnown RBP28.46■■■□□ 2.15
SSH3-209ENST00000532600 FOXD1Q16676 465 aa28.46■■■□□ 2.15
SSH3-209ENST00000532600 NCOA3Q9Y6Q9 1424 aa28.45■■■□□ 2.15
SSH3-209ENST00000532600 METP08581 1390 aa28.45■■■□□ 2.14
SSH3-209ENST00000532600 AMOTL2Q9Y2J4 779 aa28.44■■■□□ 2.14
SSH3-209ENST00000532600 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.42■■■□□ 2.14
SSH3-209ENST00000532600 SLAIN2Q9P270 581 aa28.41■■■□□ 2.14
SSH3-209ENST00000532600 SETD1AO15047 1707 aaKnown RBP28.38■■■□□ 2.13
SSH3-209ENST00000532600 PPLO60437 1756 aa28.37■■■□□ 2.13
SSH3-209ENST00000532600 MPHOSPH9Q99550 1183 aa28.36■■■□□ 2.13
SSH3-209ENST00000532600 C19orf44Q9H6X5 657 aa28.35■■■□□ 2.13
SSH3-209ENST00000532600 SOCS7O14512 581 aa28.33■■■□□ 2.13
SSH3-209ENST00000532600 SETD5Q9C0A6 1442 aa28.33■■■□□ 2.13
SSH3-209ENST00000532600 C14orf37Q86TY3 774 aa28.32■■■□□ 2.12
SSH3-209ENST00000532600 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
SSH3-209ENST00000532600 PHLPP1O60346 1717 aa28.31■■■□□ 2.12
SSH3-209ENST00000532600 SPATA31E1Q6ZUB1 1445 aa28.3■■■□□ 2.12
SSH3-209ENST00000532600 VGFO15240 615 aaPredicted RBP28.29■■■□□ 2.12
SSH3-209ENST00000532600 CCDC144AA2RUR9 1427 aa28.28■■■□□ 2.12
SSH3-209ENST00000532600 CADPS2Q86UW7 1296 aa28.28■■■□□ 2.12
SSH3-209ENST00000532600 COL16A1Q07092 1604 aaPredicted RBP28.27■■■□□ 2.12
SSH3-209ENST00000532600 DCCP43146 1447 aa28.26■■■□□ 2.11
SSH3-209ENST00000532600 ATF3P18847 181 aa28.25■■■□□ 2.11
SSH3-209ENST00000532600 NALCNQ8IZF0 1738 aa28.25■■■□□ 2.11
SSH3-209ENST00000532600 IFT172Q9UG01 1749 aa28.25■■■□□ 2.11
SSH3-209ENST00000532600 RAB3GAP2Q9H2M9 1393 aa28.24■■■□□ 2.11
SSH3-209ENST00000532600 RGS17Q9UGC6 210 aaPredicted RBP28.23■■■□□ 2.11
SSH3-209ENST00000532600 ADGRF5Q8IZF2 1346 aa28.22■■■□□ 2.11
SSH3-209ENST00000532600 AHDC1Q5TGY3 1603 aaPredicted RBP28.22■■■□□ 2.11
SSH3-209ENST00000532600 MST1RQ04912 1400 aa28.22■■■□□ 2.11
SSH3-209ENST00000532600 PHF23Q9BUL5 403 aaPredicted RBP28.22■■■□□ 2.11
SSH3-209ENST00000532600 ADGRL3Q9HAR2 1447 aa28.22■■■□□ 2.11
SSH3-209ENST00000532600 ROBO2Q9HCK4 1378 aa28.22■■■□□ 2.11
SSH3-209ENST00000532600 PRAG1Q86YV5 1406 aa28.21■■■□□ 2.11
SSH3-209ENST00000532600 PTCH1Q13635 1447 aa28.2■■■□□ 2.11
SSH3-209ENST00000532600 RGL3Q3MIN7 710 aa28.19■■■□□ 2.1
SSH3-209ENST00000532600 BRINP3Q76B58 766 aa28.19■■■□□ 2.1
SSH3-209ENST00000532600 JCADQ9P266 1359 aa28.16■■■□□ 2.1
SSH3-209ENST00000532600 ASXL1Q8IXJ9 1541 aa28.16■■■□□ 2.1
SSH3-209ENST00000532600 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
SSH3-209ENST00000532600 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
SSH3-209ENST00000532600 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
SSH3-209ENST00000532600 PIK3C2GO75747 1445 aa28.1■■■□□ 2.09
SSH3-209ENST00000532600 LRP6O75581 1613 aa28.09■■■□□ 2.09
SSH3-209ENST00000532600 SHPRHQ149N8 1683 aa28.09■■■□□ 2.09
SSH3-209ENST00000532600 C1orf167Q5SNV9 1468 aa28.07■■■□□ 2.08
SSH3-209ENST00000532600 NRXN1Q9ULB1 1477 aa28.05■■■□□ 2.08
SSH3-209ENST00000532600 TECPR2O15040 1411 aa28.04■■■□□ 2.08
SSH3-209ENST00000532600 POTEAQ6S8J7 498 aa28.04■■■□□ 2.08
SSH3-209ENST00000532600 DDX17Q92841 729 aaKnown RBP28.04■■■□□ 2.08
SSH3-209ENST00000532600 TMEM132EQ6IEE7 984 aa28.03■■■□□ 2.08
SSH3-209ENST00000532600 LRPPRCP42704 1394 aaKnown RBP28.02■■■□□ 2.08
SSH3-209ENST00000532600 MYOM2P54296 1465 aa28.02■■■□□ 2.08
SSH3-209ENST00000532600 KNDC1Q76NI1 1749 aa28.01■■■□□ 2.07
SSH3-209ENST00000532600 SPATA31A6Q5VVP1 1343 aa28.01■■■□□ 2.07
SSH3-209ENST00000532600 LAMC1P11047 1609 aa28■■■□□ 2.07
SSH3-209ENST00000532600 STK26Q9P289 416 aa28■■■□□ 2.07
SSH3-209ENST00000532600 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
SSH3-209ENST00000532600 HRCP23327 699 aa27.99■■■□□ 2.07
SSH3-209ENST00000532600 CDC42BPGQ6DT37 1551 aa27.99■■■□□ 2.07
SSH3-209ENST00000532600 PLEKHH1Q9ULM0 1364 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms