RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
CPNE7-206ENST00000532500 SPHKAPQ2M3C7 1700 aa17.45■□□□□ 0.38
CPNE7-206ENST00000532500 RBM33Q96EV2 1170 aaKnown RBP17.43■□□□□ 0.38
CPNE7-206ENST00000532500 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
CPNE7-206ENST00000532500 NUP155O75694 1391 aa17.42■□□□□ 0.38
CPNE7-206ENST00000532500 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
CPNE7-206ENST00000532500 SLC52A1Q9NWF4 448 aa17.41■□□□□ 0.38
CPNE7-206ENST00000532500 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
CPNE7-206ENST00000532500 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
CPNE7-206ENST00000532500 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
CPNE7-206ENST00000532500 ZFYVE9O95405 1425 aa17.38■□□□□ 0.37
CPNE7-206ENST00000532500 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
CPNE7-206ENST00000532500 KIF1BO60333 1816 aa17.35■□□□□ 0.37
CPNE7-206ENST00000532500 PROSER2Q86WR7 435 aaPredicted RBP17.35■□□□□ 0.37
CPNE7-206ENST00000532500 TMEM94Q12767 1356 aa17.35■□□□□ 0.37
CPNE7-206ENST00000532500 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
CPNE7-206ENST00000532500 ROBO1Q9Y6N7 1651 aa17.34■□□□□ 0.37
CPNE7-206ENST00000532500 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
CPNE7-206ENST00000532500 KCNA6P17658 529 aa17.33■□□□□ 0.36
CPNE7-206ENST00000532500 PLEKHG1Q9ULL1 1385 aa17.32■□□□□ 0.36
CPNE7-206ENST00000532500 NKTRP30414 1462 aaKnown RBP17.3■□□□□ 0.36
CPNE7-206ENST00000532500 NAIPQ13075 1403 aa17.3■□□□□ 0.36
CPNE7-206ENST00000532500 PHLPP1O60346 1717 aa17.27■□□□□ 0.36
CPNE7-206ENST00000532500 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.36
CPNE7-206ENST00000532500 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
CPNE7-206ENST00000532500 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
CPNE7-206ENST00000532500 NRXN3Q9Y4C0 1643 aa17.27■□□□□ 0.36
CPNE7-206ENST00000532500 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
CPNE7-206ENST00000532500 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
CPNE7-206ENST00000532500 DIP2AQ14689 1571 aa17.26■□□□□ 0.35
CPNE7-206ENST00000532500 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
CPNE7-206ENST00000532500 TRPM2O94759 1503 aa17.25■□□□□ 0.35
CPNE7-206ENST00000532500 SOCS7O14512 581 aa17.24■□□□□ 0.35
CPNE7-206ENST00000532500 C14orf37Q86TY3 774 aa17.24■□□□□ 0.35
CPNE7-206ENST00000532500 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
CPNE7-206ENST00000532500 MSH6P52701 1360 aa17.24■□□□□ 0.35
CPNE7-206ENST00000532500 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
CPNE7-206ENST00000532500 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
CPNE7-206ENST00000532500 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
CPNE7-206ENST00000532500 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
CPNE7-206ENST00000532500 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
CPNE7-206ENST00000532500 PPLO60437 1756 aa17.19■□□□□ 0.34
CPNE7-206ENST00000532500 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
CPNE7-206ENST00000532500 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
CPNE7-206ENST00000532500 FOXD1Q16676 465 aa17.17■□□□□ 0.34
CPNE7-206ENST00000532500 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
CPNE7-206ENST00000532500 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
CPNE7-206ENST00000532500 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
CPNE7-206ENST00000532500 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
CPNE7-206ENST00000532500 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
CPNE7-206ENST00000532500 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
CPNE7-206ENST00000532500 METP08581 1390 aa17.13■□□□□ 0.33
CPNE7-206ENST00000532500 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
CPNE7-206ENST00000532500 ATF3P18847 181 aa17.11■□□□□ 0.33
CPNE7-206ENST00000532500 IFT172Q9UG01 1749 aa17.1■□□□□ 0.33
CPNE7-206ENST00000532500 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
CPNE7-206ENST00000532500 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
CPNE7-206ENST00000532500 NCOA3Q9Y6Q9 1424 aa17.06■□□□□ 0.32
CPNE7-206ENST00000532500 RGS17Q9UGC6 210 aaPredicted RBP17.06■□□□□ 0.32
CPNE7-206ENST00000532500 SHPRHQ149N8 1683 aa17.06■□□□□ 0.32
CPNE7-206ENST00000532500 AHDC1Q5TGY3 1603 aaPredicted RBP17.06■□□□□ 0.32
CPNE7-206ENST00000532500 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
CPNE7-206ENST00000532500 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
CPNE7-206ENST00000532500 ASXL1Q8IXJ9 1541 aa17.03■□□□□ 0.32
CPNE7-206ENST00000532500 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
CPNE7-206ENST00000532500 JCADQ9P266 1359 aa17.02■□□□□ 0.32
CPNE7-206ENST00000532500 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
CPNE7-206ENST00000532500 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
CPNE7-206ENST00000532500 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
CPNE7-206ENST00000532500 MST1RQ04912 1400 aa17.02■□□□□ 0.31
CPNE7-206ENST00000532500 ADGRL3Q9HAR2 1447 aa17.02■□□□□ 0.31
CPNE7-206ENST00000532500 LRP6O75581 1613 aa17.01■□□□□ 0.31
CPNE7-206ENST00000532500 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
CPNE7-206ENST00000532500 POTEAQ6S8J7 498 aa17■□□□□ 0.31
CPNE7-206ENST00000532500 DCCP43146 1447 aa16.99■□□□□ 0.31
CPNE7-206ENST00000532500 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
CPNE7-206ENST00000532500 SETD5Q9C0A6 1442 aa16.98■□□□□ 0.31
CPNE7-206ENST00000532500 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
CPNE7-206ENST00000532500 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
CPNE7-206ENST00000532500 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
CPNE7-206ENST00000532500 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
CPNE7-206ENST00000532500 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
CPNE7-206ENST00000532500 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
CPNE7-206ENST00000532500 STK26Q9P289 416 aa16.97■□□□□ 0.31
CPNE7-206ENST00000532500 RGPD8O14715 1765 aaPredicted RBP16.96■□□□□ 0.31
CPNE7-206ENST00000532500 PTCH1Q13635 1447 aa16.96■□□□□ 0.3
CPNE7-206ENST00000532500 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
CPNE7-206ENST00000532500 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
CPNE7-206ENST00000532500 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
CPNE7-206ENST00000532500 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
CPNE7-206ENST00000532500 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
CPNE7-206ENST00000532500 ORAI2Q96SN7 254 aa16.91■□□□□ 0.3
CPNE7-206ENST00000532500 SPATA31A6Q5VVP1 1343 aa16.91■□□□□ 0.3
CPNE7-206ENST00000532500 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
CPNE7-206ENST00000532500 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
CPNE7-206ENST00000532500 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
CPNE7-206ENST00000532500 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
CPNE7-206ENST00000532500 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
CPNE7-206ENST00000532500 LAMC1P11047 1609 aa16.88■□□□□ 0.29
CPNE7-206ENST00000532500 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms