RNA–Protein interactions for RNA: ENST00000531296.1

FRMD8-208, Transcript of FERM domain containing 8, human

TSL 1 (best) BASIC

Gene FRMD8, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FRMD8-208	ENST00000531296	SLC26A8	Q96RN1	970 aa		33.18	■■■□□ 2.9
FRMD8-208	ENST00000531296	NWD1	Q149M9	1564 aa		33.17	■■■□□ 2.9
FRMD8-208	ENST00000531296	TMEM94	Q12767	1356 aa		33.13	■■■□□ 2.89
FRMD8-208	ENST00000531296	KCNA6	P17658	529 aa		33.13	■■■□□ 2.89
FRMD8-208	ENST00000531296	RIMS2	Q9UQ26	1411 aa		33.11	■■■□□ 2.89
FRMD8-208	ENST00000531296	PLEKHG1	Q9ULL1	1385 aa		33.09	■■■□□ 2.89
FRMD8-208	ENST00000531296	ITGAE	P38570	1179 aa		33.09	■■■□□ 2.89
FRMD8-208	ENST00000531296	SENP3	Q9H4L4	574 aa	Predicted RBP	33.09	■■■□□ 2.89
FRMD8-208	ENST00000531296	NKTR	P30414	1462 aa	Known RBP	33.09	■■■□□ 2.89
FRMD8-208	ENST00000531296	NUP155	O75694	1391 aa		33.06	■■■□□ 2.88
FRMD8-208	ENST00000531296	RBM33	Q96EV2	1170 aa	Known RBP	33.05	■■■□□ 2.88
FRMD8-208	ENST00000531296	CHD2	O14647	1828 aa	Known RBP	33.05	■■■□□ 2.88
FRMD8-208	ENST00000531296	PROSER2	Q86WR7	435 aa	Predicted RBP	33	■■■□□ 2.87
FRMD8-208	ENST00000531296	FAM135B	Q49AJ0	1406 aa		33	■■■□□ 2.87
FRMD8-208	ENST00000531296	RRBP1	Q9P2E9	1410 aa	Known RBP	32.99	■■■□□ 2.87
FRMD8-208	ENST00000531296	ADAMTS13	Q76LX8	1427 aa		32.98	■■■□□ 2.87
FRMD8-208	ENST00000531296	BCAN	Q96GW7	911 aa		32.98	■■■□□ 2.87
FRMD8-208	ENST00000531296	ROBO1	Q9Y6N7	1651 aa		32.97	■■■□□ 2.87
FRMD8-208	ENST00000531296	PPP1R15A	O75807	674 aa	Predicted RBP	32.96	■■■□□ 2.87
FRMD8-208	ENST00000531296	CHGA	P10645	457 aa	Known RBP	32.96	■■■□□ 2.87
FRMD8-208	ENST00000531296	SPHKAP	Q2M3C7	1700 aa		32.95	■■■□□ 2.87
FRMD8-208	ENST00000531296	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.94	■■■□□ 2.86
FRMD8-208	ENST00000531296	DIP2A	Q14689	1571 aa		32.92	■■■□□ 2.86
FRMD8-208	ENST00000531296	HDGF	P51858	240 aa	Known RBP	32.92	■■■□□ 2.86
FRMD8-208	ENST00000531296	TBX22	Q9Y458	520 aa		32.92	■■■□□ 2.86
FRMD8-208	ENST00000531296	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
FRMD8-208	ENST00000531296	NAIP	Q13075	1403 aa		32.87	■■■□□ 2.85
FRMD8-208	ENST00000531296	MSH6	P52701	1360 aa		32.87	■■■□□ 2.85
FRMD8-208	ENST00000531296	NRXN3	Q9Y4C0	1643 aa		32.86	■■■□□ 2.85
FRMD8-208	ENST00000531296	PHF23	Q9BUL5	403 aa	Predicted RBP	32.84	■■■□□ 2.85
FRMD8-208	ENST00000531296	CLTCL1	P53675	1640 aa		32.82	■■■□□ 2.84
FRMD8-208	ENST00000531296	PIK3R4	Q99570	1358 aa		32.82	■■■□□ 2.84
FRMD8-208	ENST00000531296	PTPRU	Q92729	1446 aa		32.81	■■■□□ 2.84
FRMD8-208	ENST00000531296	TRPM2	O94759	1503 aa		32.8	■■■□□ 2.84
FRMD8-208	ENST00000531296	NCOA3	Q9Y6Q9	1424 aa		32.79	■■■□□ 2.84
FRMD8-208	ENST00000531296	SETBP1	Q9Y6X0	1596 aa		32.79	■■■□□ 2.84
FRMD8-208	ENST00000531296	SLAIN2	Q9P270	581 aa		32.77	■■■□□ 2.84
FRMD8-208	ENST00000531296	RGS17	Q9UGC6	210 aa	Predicted RBP	32.77	■■■□□ 2.84
FRMD8-208	ENST00000531296	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.77	■■■□□ 2.84
FRMD8-208	ENST00000531296	PHLPP1	O60346	1717 aa		32.75	■■■□□ 2.83
FRMD8-208	ENST00000531296	XRN1	Q8IZH2	1706 aa	Known RBP	32.75	■■■□□ 2.83
FRMD8-208	ENST00000531296	NEXMIF	Q5QGS0	1516 aa		32.73	■■■□□ 2.83
FRMD8-208	ENST00000531296	HFM1	A2PYH4	1435 aa		32.72	■■■□□ 2.83
FRMD8-208	ENST00000531296	COL16A1	Q07092	1604 aa	Predicted RBP	32.7	■■■□□ 2.83
FRMD8-208	ENST00000531296	AMOTL2	Q9Y2J4	779 aa		32.69	■■■□□ 2.82
FRMD8-208	ENST00000531296	KIF1B	O60333	1816 aa		32.67	■■■□□ 2.82
FRMD8-208	ENST00000531296	ZNF326	Q5BKZ1	582 aa	Known RBP	32.66	■■■□□ 2.82
FRMD8-208	ENST00000531296	MET	P08581	1390 aa		32.65	■■■□□ 2.82
FRMD8-208	ENST00000531296	C14orf37	Q86TY3	774 aa		32.64	■■■□□ 2.82
FRMD8-208	ENST00000531296	C19orf44	Q9H6X5	657 aa		32.64	■■■□□ 2.82
FRMD8-208	ENST00000531296	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.62	■■■□□ 2.81
FRMD8-208	ENST00000531296	CADPS2	Q86UW7	1296 aa		32.6	■■■□□ 2.81
FRMD8-208	ENST00000531296	JCAD	Q9P266	1359 aa		32.59	■■■□□ 2.81
FRMD8-208	ENST00000531296	SETD1A	O15047	1707 aa	Known RBP	32.58	■■■□□ 2.81
FRMD8-208	ENST00000531296	DCC	P43146	1447 aa		32.58	■■■□□ 2.81
FRMD8-208	ENST00000531296	ATF3	P18847	181 aa		32.56	■■■□□ 2.8
FRMD8-208	ENST00000531296	TRIM52	Q96A61	297 aa		32.55	■■■□□ 2.8
FRMD8-208	ENST00000531296	POTEA	Q6S8J7	498 aa		32.54	■■■□□ 2.8
FRMD8-208	ENST00000531296	NALCN	Q8IZF0	1738 aa		32.53	■■■□□ 2.8
FRMD8-208	ENST00000531296	LRP6	O75581	1613 aa		32.51	■■■□□ 2.8
FRMD8-208	ENST00000531296	BRINP3	Q76B58	766 aa		32.51	■■■□□ 2.79
FRMD8-208	ENST00000531296	MST1R	Q04912	1400 aa		32.51	■■■□□ 2.79
FRMD8-208	ENST00000531296	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.5	■■■□□ 2.79
FRMD8-208	ENST00000531296	SHPRH	Q149N8	1683 aa		32.5	■■■□□ 2.79
FRMD8-208	ENST00000531296	ASXL1	Q8IXJ9	1541 aa		32.49	■■■□□ 2.79
FRMD8-208	ENST00000531296	PPL	O60437	1756 aa		32.49	■■■□□ 2.79
FRMD8-208	ENST00000531296	ADGRL3	Q9HAR2	1447 aa		32.49	■■■□□ 2.79
FRMD8-208	ENST00000531296	NHSL1	Q5SYE7	1610 aa		32.45	■■■□□ 2.79
FRMD8-208	ENST00000531296	FOXD1	Q16676	465 aa		32.43	■■■□□ 2.78
FRMD8-208	ENST00000531296	PTCH1	Q13635	1447 aa		32.43	■■■□□ 2.78
FRMD8-208	ENST00000531296	SPATA31A6	Q5VVP1	1343 aa		32.41	■■■□□ 2.78
FRMD8-208	ENST00000531296	PRAG1	Q86YV5	1406 aa		32.41	■■■□□ 2.78
FRMD8-208	ENST00000531296	VGF	O15240	615 aa	Predicted RBP	32.4	■■■□□ 2.78
FRMD8-208	ENST00000531296	RPGRIP1L	Q68CZ1	1315 aa		32.39	■■■□□ 2.78
FRMD8-208	ENST00000531296	ROBO2	Q9HCK4	1378 aa		32.39	■■■□□ 2.78
FRMD8-208	ENST00000531296	SETD5	Q9C0A6	1442 aa		32.35	■■■□□ 2.77
FRMD8-208	ENST00000531296	IFT172	Q9UG01	1749 aa		32.33	■■■□□ 2.77
FRMD8-208	ENST00000531296	SPATA31E1	Q6ZUB1	1445 aa		32.33	■■■□□ 2.77
FRMD8-208	ENST00000531296	C1orf167	Q5SNV9	1468 aa		32.3	■■■□□ 2.76
FRMD8-208	ENST00000531296	CCDC144A	A2RUR9	1427 aa		32.3	■■■□□ 2.76
FRMD8-208	ENST00000531296	DDX17	Q92841	729 aa	Known RBP	32.3	■■■□□ 2.76
FRMD8-208	ENST00000531296	MPHOSPH9	Q99550	1183 aa		32.29	■■■□□ 2.76
FRMD8-208	ENST00000531296	LAMC1	P11047	1609 aa		32.29	■■■□□ 2.76
FRMD8-208	ENST00000531296	ADGRF5	Q8IZF2	1346 aa		32.26	■■■□□ 2.76
FRMD8-208	ENST00000531296	MEX3C	Q5U5Q3	659 aa	Known RBP	32.24	■■■□□ 2.75
FRMD8-208	ENST00000531296	PNPLA6	Q8IY17	1366 aa		32.21	■■■□□ 2.75
FRMD8-208	ENST00000531296	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.21	■■■□□ 2.75
FRMD8-208	ENST00000531296	NUTM2E	B1AL46	878 aa	Predicted RBP	32.21	■■■□□ 2.75
FRMD8-208	ENST00000531296	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.21	■■■□□ 2.75
FRMD8-208	ENST00000531296	RGL3	Q3MIN7	710 aa		32.2	■■■□□ 2.75
FRMD8-208	ENST00000531296	LRRC59	Q96AG4	307 aa	Known RBP	32.19	■■■□□ 2.74
FRMD8-208	ENST00000531296	ZNF772	Q68DY9	489 aa	Predicted RBP	32.18	■■■□□ 2.74
FRMD8-208	ENST00000531296	ORAI2	Q96SN7	254 aa		32.18	■■■□□ 2.74
FRMD8-208	ENST00000531296	CDC42BPG	Q6DT37	1551 aa		32.18	■■■□□ 2.74
FRMD8-208	ENST00000531296	TECPR2	O15040	1411 aa		32.17	■■■□□ 2.74
FRMD8-208	ENST00000531296	PIK3C2G	O75747	1445 aa		32.17	■■■□□ 2.74
FRMD8-208	ENST00000531296	ANKRD30B	Q9BXX2	1392 aa		32.17	■■■□□ 2.74
FRMD8-208	ENST00000531296	KNDC1	Q76NI1	1749 aa		32.14	■■■□□ 2.74
FRMD8-208	ENST00000531296	SOS2	Q07890	1332 aa	Predicted RBP	32.13	■■■□□ 2.73
FRMD8-208	ENST00000531296	LRPPRC	P42704	1394 aa	Known RBP	32.11	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms