RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
FOXRED1-211ENST00000531257 ROCK1Q13464 1354 aa17.49■□□□□ 0.39
FOXRED1-211ENST00000531257 SOCS7O14512 581 aa17.48■□□□□ 0.39
FOXRED1-211ENST00000531257 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
FOXRED1-211ENST00000531257 CHD2O14647 1828 aaKnown RBP17.46■□□□□ 0.39
FOXRED1-211ENST00000531257 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
FOXRED1-211ENST00000531257 KCNA6P17658 529 aa17.44■□□□□ 0.38
FOXRED1-211ENST00000531257 RBM33Q96EV2 1170 aaKnown RBP17.44■□□□□ 0.38
FOXRED1-211ENST00000531257 RIMS2Q9UQ26 1411 aa17.44■□□□□ 0.38
FOXRED1-211ENST00000531257 NWD1Q149M9 1564 aa17.44■□□□□ 0.38
FOXRED1-211ENST00000531257 NUP155O75694 1391 aa17.43■□□□□ 0.38
FOXRED1-211ENST00000531257 TMEM94Q12767 1356 aa17.43■□□□□ 0.38
FOXRED1-211ENST00000531257 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
FOXRED1-211ENST00000531257 ZFYVE9O95405 1425 aa17.43■□□□□ 0.38
FOXRED1-211ENST00000531257 SPHKAPQ2M3C7 1700 aa17.43■□□□□ 0.38
FOXRED1-211ENST00000531257 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
FOXRED1-211ENST00000531257 ROBO1Q9Y6N7 1651 aa17.41■□□□□ 0.38
FOXRED1-211ENST00000531257 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
FOXRED1-211ENST00000531257 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
FOXRED1-211ENST00000531257 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
FOXRED1-211ENST00000531257 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
FOXRED1-211ENST00000531257 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.36■□□□□ 0.37
FOXRED1-211ENST00000531257 MSH6P52701 1360 aa17.35■□□□□ 0.37
FOXRED1-211ENST00000531257 KIF1BO60333 1816 aa17.34■□□□□ 0.37
FOXRED1-211ENST00000531257 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
FOXRED1-211ENST00000531257 PHLPP1O60346 1717 aa17.33■□□□□ 0.37
FOXRED1-211ENST00000531257 FAM135BQ49AJ0 1406 aa17.33■□□□□ 0.36
FOXRED1-211ENST00000531257 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.36
FOXRED1-211ENST00000531257 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
FOXRED1-211ENST00000531257 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
FOXRED1-211ENST00000531257 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
FOXRED1-211ENST00000531257 TRPM2O94759 1503 aa17.31■□□□□ 0.36
FOXRED1-211ENST00000531257 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.3■□□□□ 0.36
FOXRED1-211ENST00000531257 CLTCL1P53675 1640 aa17.3■□□□□ 0.36
FOXRED1-211ENST00000531257 ZNF326Q5BKZ1 582 aaKnown RBP17.3■□□□□ 0.36
FOXRED1-211ENST00000531257 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
FOXRED1-211ENST00000531257 NAIPQ13075 1403 aa17.28■□□□□ 0.36
FOXRED1-211ENST00000531257 SLAIN2Q9P270 581 aa17.27■□□□□ 0.36
FOXRED1-211ENST00000531257 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
FOXRED1-211ENST00000531257 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
FOXRED1-211ENST00000531257 SETBP1Q9Y6X0 1596 aa17.24■□□□□ 0.35
FOXRED1-211ENST00000531257 AMOTL2Q9Y2J4 779 aa17.24■□□□□ 0.35
FOXRED1-211ENST00000531257 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
FOXRED1-211ENST00000531257 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
FOXRED1-211ENST00000531257 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
FOXRED1-211ENST00000531257 NEXMIFQ5QGS0 1516 aa17.22■□□□□ 0.35
FOXRED1-211ENST00000531257 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
FOXRED1-211ENST00000531257 ATF3P18847 181 aa17.21■□□□□ 0.35
FOXRED1-211ENST00000531257 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
FOXRED1-211ENST00000531257 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
FOXRED1-211ENST00000531257 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
FOXRED1-211ENST00000531257 RGS17Q9UGC6 210 aaPredicted RBP17.19■□□□□ 0.34
FOXRED1-211ENST00000531257 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
FOXRED1-211ENST00000531257 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
FOXRED1-211ENST00000531257 PPLO60437 1756 aa17.17■□□□□ 0.34
FOXRED1-211ENST00000531257 METP08581 1390 aa17.16■□□□□ 0.34
FOXRED1-211ENST00000531257 JCADQ9P266 1359 aa17.16■□□□□ 0.34
FOXRED1-211ENST00000531257 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
FOXRED1-211ENST00000531257 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
FOXRED1-211ENST00000531257 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
FOXRED1-211ENST00000531257 DCCP43146 1447 aa17.12■□□□□ 0.33
FOXRED1-211ENST00000531257 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
FOXRED1-211ENST00000531257 FOXD1Q16676 465 aa17.11■□□□□ 0.33
FOXRED1-211ENST00000531257 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
FOXRED1-211ENST00000531257 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
FOXRED1-211ENST00000531257 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
FOXRED1-211ENST00000531257 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
FOXRED1-211ENST00000531257 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
FOXRED1-211ENST00000531257 MST1RQ04912 1400 aa17.09■□□□□ 0.33
FOXRED1-211ENST00000531257 LRP6O75581 1613 aa17.08■□□□□ 0.32
FOXRED1-211ENST00000531257 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
FOXRED1-211ENST00000531257 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
FOXRED1-211ENST00000531257 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
FOXRED1-211ENST00000531257 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
FOXRED1-211ENST00000531257 CCDC144AA2RUR9 1427 aa17.04■□□□□ 0.32
FOXRED1-211ENST00000531257 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
FOXRED1-211ENST00000531257 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
FOXRED1-211ENST00000531257 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
FOXRED1-211ENST00000531257 PTCH1Q13635 1447 aa17.04■□□□□ 0.32
FOXRED1-211ENST00000531257 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
FOXRED1-211ENST00000531257 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
FOXRED1-211ENST00000531257 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
FOXRED1-211ENST00000531257 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.31
FOXRED1-211ENST00000531257 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
FOXRED1-211ENST00000531257 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
FOXRED1-211ENST00000531257 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
FOXRED1-211ENST00000531257 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
FOXRED1-211ENST00000531257 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
FOXRED1-211ENST00000531257 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
FOXRED1-211ENST00000531257 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.31
FOXRED1-211ENST00000531257 LAMC1P11047 1609 aa16.96■□□□□ 0.31
FOXRED1-211ENST00000531257 STK26Q9P289 416 aa16.96■□□□□ 0.31
FOXRED1-211ENST00000531257 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.3
FOXRED1-211ENST00000531257 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
FOXRED1-211ENST00000531257 PNPLA6Q8IY17 1366 aa16.94■□□□□ 0.3
FOXRED1-211ENST00000531257 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
FOXRED1-211ENST00000531257 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
FOXRED1-211ENST00000531257 AFF2P51816 1311 aa16.93■□□□□ 0.3
FOXRED1-211ENST00000531257 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
FOXRED1-211ENST00000531257 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms