RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 ZFYVE9O95405 1425 aa34.59■■■■□ 3.13
PACSIN3-207ENST00000530513 IQGAP3Q86VI3 1631 aa34.59■■■■□ 3.13
PACSIN3-207ENST00000530513 NKTRP30414 1462 aaKnown RBP34.58■■■■□ 3.13
PACSIN3-207ENST00000530513 KCNA6P17658 529 aa34.56■■■■□ 3.12
PACSIN3-207ENST00000530513 ROBO1Q9Y6N7 1651 aa34.55■■■■□ 3.12
PACSIN3-207ENST00000530513 CHD2O14647 1828 aaKnown RBP34.54■■■■□ 3.12
PACSIN3-207ENST00000530513 ROCK1Q13464 1354 aa34.52■■■■□ 3.12
PACSIN3-207ENST00000530513 PHF23Q9BUL5 403 aaPredicted RBP34.52■■■■□ 3.12
PACSIN3-207ENST00000530513 RIMS2Q9UQ26 1411 aa34.51■■■■□ 3.12
PACSIN3-207ENST00000530513 RBM33Q96EV2 1170 aaKnown RBP34.5■■■■□ 3.11
PACSIN3-207ENST00000530513 PLEKHG1Q9ULL1 1385 aa34.49■■■■□ 3.11
PACSIN3-207ENST00000530513 FAM135BQ49AJ0 1406 aa34.49■■■■□ 3.11
PACSIN3-207ENST00000530513 PROSER2Q86WR7 435 aaPredicted RBP34.46■■■■□ 3.11
PACSIN3-207ENST00000530513 BCANQ96GW7 911 aa34.45■■■■□ 3.11
PACSIN3-207ENST00000530513 PPP1R15AO75807 674 aaPredicted RBP34.41■■■■□ 3.1
PACSIN3-207ENST00000530513 DIP2AQ14689 1571 aa34.38■■■■□ 3.09
PACSIN3-207ENST00000530513 MSH6P52701 1360 aa34.37■■■■□ 3.09
PACSIN3-207ENST00000530513 SPHKAPQ2M3C7 1700 aa34.37■■■■□ 3.09
PACSIN3-207ENST00000530513 CHGAP10645 457 aaKnown RBP34.36■■■■□ 3.09
PACSIN3-207ENST00000530513 ITGAEP38570 1179 aa34.35■■■■□ 3.09
PACSIN3-207ENST00000530513 ADAMTS13Q76LX8 1427 aa34.35■■■■□ 3.09
PACSIN3-207ENST00000530513 PHLPP1O60346 1717 aa34.35■■■■□ 3.09
PACSIN3-207ENST00000530513 NUP155O75694 1391 aa34.35■■■■□ 3.09
PACSIN3-207ENST00000530513 PPARGC1BQ86YN6 1023 aaKnown RBP34.32■■■■□ 3.08
PACSIN3-207ENST00000530513 HDGFP51858 240 aaKnown RBP34.31■■■■□ 3.08
PACSIN3-207ENST00000530513 NUTM2DQ5VT03 806 aaPredicted RBP34.3■■■■□ 3.08
PACSIN3-207ENST00000530513 RGS17Q9UGC6 210 aaPredicted RBP34.3■■■■□ 3.08
PACSIN3-207ENST00000530513 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.29■■■■□ 3.08
PACSIN3-207ENST00000530513 TBX22Q9Y458 520 aa34.28■■■■□ 3.08
PACSIN3-207ENST00000530513 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.27■■■■□ 3.08
PACSIN3-207ENST00000530513 NRXN3Q9Y4C0 1643 aa34.26■■■■□ 3.08
PACSIN3-207ENST00000530513 TRPM2O94759 1503 aa34.26■■■■□ 3.08
PACSIN3-207ENST00000530513 COL16A1Q07092 1604 aaPredicted RBP34.24■■■■□ 3.07
PACSIN3-207ENST00000530513 SLAIN2Q9P270 581 aa34.22■■■■□ 3.07
PACSIN3-207ENST00000530513 PIK3R4Q99570 1358 aa34.21■■■■□ 3.07
PACSIN3-207ENST00000530513 NCOA3Q9Y6Q9 1424 aa34.21■■■■□ 3.07
PACSIN3-207ENST00000530513 XRN1Q8IZH2 1706 aaKnown RBP34.19■■■■□ 3.06
PACSIN3-207ENST00000530513 SETBP1Q9Y6X0 1596 aa34.18■■■■□ 3.06
PACSIN3-207ENST00000530513 CLTCL1P53675 1640 aa34.18■■■■□ 3.06
PACSIN3-207ENST00000530513 PTPRUQ92729 1446 aa34.17■■■■□ 3.06
PACSIN3-207ENST00000530513 RRBP1Q9P2E9 1410 aaKnown RBP34.13■■■■□ 3.05
PACSIN3-207ENST00000530513 C14orf37Q86TY3 774 aa34.13■■■■□ 3.05
PACSIN3-207ENST00000530513 AHDC1Q5TGY3 1603 aaPredicted RBP34.12■■■■□ 3.05
PACSIN3-207ENST00000530513 JCADQ9P266 1359 aa34.11■■■■□ 3.05
PACSIN3-207ENST00000530513 NEXMIFQ5QGS0 1516 aa34.09■■■■□ 3.05
PACSIN3-207ENST00000530513 KIF1BO60333 1816 aa34.09■■■■□ 3.05
PACSIN3-207ENST00000530513 POTEAQ6S8J7 498 aa34.08■■■■□ 3.05
PACSIN3-207ENST00000530513 SHPRHQ149N8 1683 aa34.06■■■■□ 3.04
PACSIN3-207ENST00000530513 NAIPQ13075 1403 aa34.06■■■■□ 3.04
PACSIN3-207ENST00000530513 AMOTL2Q9Y2J4 779 aa34.06■■■■□ 3.04
PACSIN3-207ENST00000530513 CADPS2Q86UW7 1296 aa34.04■■■■□ 3.04
PACSIN3-207ENST00000530513 C19orf44Q9H6X5 657 aa34.04■■■■□ 3.04
PACSIN3-207ENST00000530513 SETD1AO15047 1707 aaKnown RBP34.04■■■■□ 3.04
PACSIN3-207ENST00000530513 LRP6O75581 1613 aa34.04■■■■□ 3.04
PACSIN3-207ENST00000530513 ATF3P18847 181 aa34.02■■■■□ 3.04
PACSIN3-207ENST00000530513 ZNF326Q5BKZ1 582 aaKnown RBP34.01■■■■□ 3.03
PACSIN3-207ENST00000530513 DCCP43146 1447 aa34.01■■■■□ 3.03
PACSIN3-207ENST00000530513 NALCNQ8IZF0 1738 aa34.01■■■■□ 3.03
PACSIN3-207ENST00000530513 METP08581 1390 aa33.99■■■■□ 3.03
PACSIN3-207ENST00000530513 ASXL1Q8IXJ9 1541 aa33.97■■■■□ 3.03
PACSIN3-207ENST00000530513 NHSL1Q5SYE7 1610 aa33.97■■■■□ 3.03
PACSIN3-207ENST00000530513 MST1RQ04912 1400 aa33.93■■■■□ 3.02
PACSIN3-207ENST00000530513 BRINP3Q76B58 766 aa33.92■■■■□ 3.02
PACSIN3-207ENST00000530513 HFM1A2PYH4 1435 aa33.91■■■■□ 3.02
PACSIN3-207ENST00000530513 SPATA31A6Q5VVP1 1343 aa33.91■■■■□ 3.02
PACSIN3-207ENST00000530513 ADGRL3Q9HAR2 1447 aa33.89■■■■□ 3.02
PACSIN3-207ENST00000530513 PPLO60437 1756 aa33.87■■■■□ 3.01
PACSIN3-207ENST00000530513 MEX3CQ5U5Q3 659 aaKnown RBP33.81■■■■□ 3
PACSIN3-207ENST00000530513 TRIM52Q96A61 297 aa33.8■■■■□ 3
PACSIN3-207ENST00000530513 PTCH1Q13635 1447 aa33.79■■■■□ 3
PACSIN3-207ENST00000530513 SETD5Q9C0A6 1442 aa33.79■■■■□ 3
PACSIN3-207ENST00000530513 PRAG1Q86YV5 1406 aa33.73■■■□□ 2.99
PACSIN3-207ENST00000530513 LAMC1P11047 1609 aa33.73■■■□□ 2.99
PACSIN3-207ENST00000530513 SLC4A1APQ9BWU0 796 aaKnown RBP33.73■■■□□ 2.99
PACSIN3-207ENST00000530513 ROBO2Q9HCK4 1378 aa33.72■■■□□ 2.99
PACSIN3-207ENST00000530513 NUTM2BA6NNL0 878 aaPredicted RBP33.7■■■□□ 2.99
PACSIN3-207ENST00000530513 NUTM2EB1AL46 878 aaPredicted RBP33.7■■■□□ 2.99
PACSIN3-207ENST00000530513 VGFO15240 615 aaPredicted RBP33.7■■■□□ 2.99
PACSIN3-207ENST00000530513 ZNF772Q68DY9 489 aaPredicted RBP33.7■■■□□ 2.99
PACSIN3-207ENST00000530513 NUTM2AQ8IVF1 878 aaPredicted RBP33.7■■■□□ 2.99
PACSIN3-207ENST00000530513 DDX17Q92841 729 aaKnown RBP33.7■■■□□ 2.99
PACSIN3-207ENST00000530513 C1orf167Q5SNV9 1468 aa33.69■■■□□ 2.98
PACSIN3-207ENST00000530513 IFT172Q9UG01 1749 aa33.69■■■□□ 2.98
PACSIN3-207ENST00000530513 RPGRIP1LQ68CZ1 1315 aa33.66■■■□□ 2.98
PACSIN3-207ENST00000530513 PNPLA6Q8IY17 1366 aa33.66■■■□□ 2.98
PACSIN3-207ENST00000530513 FOXD1Q16676 465 aa33.64■■■□□ 2.98
PACSIN3-207ENST00000530513 LRRC59Q96AG4 307 aaKnown RBP33.62■■■□□ 2.97
PACSIN3-207ENST00000530513 AFF2P51816 1311 aa33.6■■■□□ 2.97
PACSIN3-207ENST00000530513 CDC42BPGQ6DT37 1551 aa33.6■■■□□ 2.97
PACSIN3-207ENST00000530513 CCDC144AA2RUR9 1427 aa33.58■■■□□ 2.97
PACSIN3-207ENST00000530513 CDK12Q9NYV4 1490 aaPredicted RBP33.56■■■□□ 2.96
PACSIN3-207ENST00000530513 SPATA31E1Q6ZUB1 1445 aa33.56■■■□□ 2.96
PACSIN3-207ENST00000530513 KNDC1Q76NI1 1749 aa33.55■■■□□ 2.96
PACSIN3-207ENST00000530513 ORAI2Q96SN7 254 aa33.54■■■□□ 2.96
PACSIN3-207ENST00000530513 RXRBP28702 533 aa33.53■■■□□ 2.96
PACSIN3-207ENST00000530513 COL22A1Q8NFW1 1626 aaPredicted RBP33.52■■■□□ 2.96
PACSIN3-207ENST00000530513 ADGRF5Q8IZF2 1346 aa33.52■■■□□ 2.96
PACSIN3-207ENST00000530513 C8orf37Q96NL8 207 aa33.51■■■□□ 2.95
PACSIN3-207ENST00000530513 SOS2Q07890 1332 aaPredicted RBP33.5■■■□□ 2.95
PACSIN3-207ENST00000530513 TECPR2O15040 1411 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms