RNA–Protein interactions for RNA: ENST00000528529.1

MRPL49-205, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-205ENST00000528529 SLC26A8Q96RN1 970 aa24.04■■□□□ 1.44
MRPL49-205ENST00000528529 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
MRPL49-205ENST00000528529 BCANQ96GW7 911 aa24.02■■□□□ 1.44
MRPL49-205ENST00000528529 NWD1Q149M9 1564 aa24.02■■□□□ 1.44
MRPL49-205ENST00000528529 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
MRPL49-205ENST00000528529 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
MRPL49-205ENST00000528529 RIMS2Q9UQ26 1411 aa24■■□□□ 1.43
MRPL49-205ENST00000528529 KCNA6P17658 529 aa23.99■■□□□ 1.43
MRPL49-205ENST00000528529 TMEM94Q12767 1356 aa23.99■■□□□ 1.43
MRPL49-205ENST00000528529 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
MRPL49-205ENST00000528529 NKTRP30414 1462 aaKnown RBP23.98■■□□□ 1.43
MRPL49-205ENST00000528529 NUP155O75694 1391 aa23.97■■□□□ 1.43
MRPL49-205ENST00000528529 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
MRPL49-205ENST00000528529 CHGAP10645 457 aaKnown RBP23.96■■□□□ 1.43
MRPL49-205ENST00000528529 SPHKAPQ2M3C7 1700 aa23.96■■□□□ 1.43
MRPL49-205ENST00000528529 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
MRPL49-205ENST00000528529 HDGFP51858 240 aaKnown RBP23.93■■□□□ 1.42
MRPL49-205ENST00000528529 ROBO1Q9Y6N7 1651 aa23.92■■□□□ 1.42
MRPL49-205ENST00000528529 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
MRPL49-205ENST00000528529 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
MRPL49-205ENST00000528529 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.89■■□□□ 1.41
MRPL49-205ENST00000528529 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
MRPL49-205ENST00000528529 FAM135BQ49AJ0 1406 aa23.88■■□□□ 1.41
MRPL49-205ENST00000528529 NUTM2DQ5VT03 806 aaPredicted RBP23.87■■□□□ 1.41
MRPL49-205ENST00000528529 MSH6P52701 1360 aa23.87■■□□□ 1.41
MRPL49-205ENST00000528529 RRBP1Q9P2E9 1410 aaKnown RBP23.86■■□□□ 1.41
MRPL49-205ENST00000528529 ADAMTS13Q76LX8 1427 aa23.84■■□□□ 1.41
MRPL49-205ENST00000528529 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
MRPL49-205ENST00000528529 TRPM2O94759 1503 aa23.81■■□□□ 1.4
MRPL49-205ENST00000528529 KIF1BO60333 1816 aa23.81■■□□□ 1.4
MRPL49-205ENST00000528529 PHLPP1O60346 1717 aa23.81■■□□□ 1.4
MRPL49-205ENST00000528529 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
MRPL49-205ENST00000528529 NRXN3Q9Y4C0 1643 aa23.78■■□□□ 1.4
MRPL49-205ENST00000528529 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.78■■□□□ 1.4
MRPL49-205ENST00000528529 PIK3R4Q99570 1358 aa23.78■■□□□ 1.4
MRPL49-205ENST00000528529 NAIPQ13075 1403 aa23.77■■□□□ 1.4
MRPL49-205ENST00000528529 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
MRPL49-205ENST00000528529 NCOA3Q9Y6Q9 1424 aa23.75■■□□□ 1.39
MRPL49-205ENST00000528529 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
MRPL49-205ENST00000528529 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
MRPL49-205ENST00000528529 SLAIN2Q9P270 581 aa23.74■■□□□ 1.39
MRPL49-205ENST00000528529 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
MRPL49-205ENST00000528529 NEXMIFQ5QGS0 1516 aa23.7■■□□□ 1.38
MRPL49-205ENST00000528529 PTPRUQ92729 1446 aa23.7■■□□□ 1.38
MRPL49-205ENST00000528529 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
MRPL49-205ENST00000528529 COL16A1Q07092 1604 aaPredicted RBP23.69■■□□□ 1.38
MRPL49-205ENST00000528529 AMOTL2Q9Y2J4 779 aa23.68■■□□□ 1.38
MRPL49-205ENST00000528529 TRIM52Q96A61 297 aa23.66■■□□□ 1.38
MRPL49-205ENST00000528529 ATF3P18847 181 aa23.65■■□□□ 1.38
MRPL49-205ENST00000528529 CADPS2Q86UW7 1296 aa23.65■■□□□ 1.38
MRPL49-205ENST00000528529 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
MRPL49-205ENST00000528529 RGS17Q9UGC6 210 aaPredicted RBP23.64■■□□□ 1.37
MRPL49-205ENST00000528529 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
MRPL49-205ENST00000528529 JCADQ9P266 1359 aa23.62■■□□□ 1.37
MRPL49-205ENST00000528529 METP08581 1390 aa23.61■■□□□ 1.37
MRPL49-205ENST00000528529 PPLO60437 1756 aa23.6■■□□□ 1.37
MRPL49-205ENST00000528529 SETD1AO15047 1707 aaKnown RBP23.6■■□□□ 1.37
MRPL49-205ENST00000528529 NALCNQ8IZF0 1738 aa23.6■■□□□ 1.37
MRPL49-205ENST00000528529 DCCP43146 1447 aa23.59■■□□□ 1.37
MRPL49-205ENST00000528529 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
MRPL49-205ENST00000528529 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.37
MRPL49-205ENST00000528529 NHSL1Q5SYE7 1610 aa23.54■■□□□ 1.36
MRPL49-205ENST00000528529 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
MRPL49-205ENST00000528529 ADGRL3Q9HAR2 1447 aa23.53■■□□□ 1.36
MRPL49-205ENST00000528529 MST1RQ04912 1400 aa23.52■■□□□ 1.36
MRPL49-205ENST00000528529 POTEAQ6S8J7 498 aa23.52■■□□□ 1.36
MRPL49-205ENST00000528529 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
MRPL49-205ENST00000528529 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
MRPL49-205ENST00000528529 LRP6O75581 1613 aa23.51■■□□□ 1.35
MRPL49-205ENST00000528529 SPATA31A6Q5VVP1 1343 aa23.49■■□□□ 1.35
MRPL49-205ENST00000528529 FOXD1Q16676 465 aa23.48■■□□□ 1.35
MRPL49-205ENST00000528529 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
MRPL49-205ENST00000528529 PTCH1Q13635 1447 aa23.48■■□□□ 1.35
MRPL49-205ENST00000528529 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
MRPL49-205ENST00000528529 MEX3CQ5U5Q3 659 aaKnown RBP23.46■■□□□ 1.35
MRPL49-205ENST00000528529 CCDC144AA2RUR9 1427 aa23.45■■□□□ 1.34
MRPL49-205ENST00000528529 ROBO2Q9HCK4 1378 aa23.42■■□□□ 1.34
MRPL49-205ENST00000528529 PRAG1Q86YV5 1406 aa23.41■■□□□ 1.34
MRPL49-205ENST00000528529 SETD5Q9C0A6 1442 aa23.41■■□□□ 1.34
MRPL49-205ENST00000528529 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.34
MRPL49-205ENST00000528529 MPHOSPH9Q99550 1183 aa23.39■■□□□ 1.33
MRPL49-205ENST00000528529 NUTM2BA6NNL0 878 aaPredicted RBP23.38■■□□□ 1.33
MRPL49-205ENST00000528529 NUTM2EB1AL46 878 aaPredicted RBP23.38■■□□□ 1.33
MRPL49-205ENST00000528529 NUTM2AQ8IVF1 878 aaPredicted RBP23.38■■□□□ 1.33
MRPL49-205ENST00000528529 LAMC1P11047 1609 aa23.37■■□□□ 1.33
MRPL49-205ENST00000528529 DDX17Q92841 729 aaKnown RBP23.37■■□□□ 1.33
MRPL49-205ENST00000528529 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
MRPL49-205ENST00000528529 RGL3Q3MIN7 710 aa23.36■■□□□ 1.33
MRPL49-205ENST00000528529 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
MRPL49-205ENST00000528529 LRRC59Q96AG4 307 aaKnown RBP23.35■■□□□ 1.33
MRPL49-205ENST00000528529 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
MRPL49-205ENST00000528529 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
MRPL49-205ENST00000528529 CDC42BPGQ6DT37 1551 aa23.33■■□□□ 1.33
MRPL49-205ENST00000528529 ANKRD30BQ9BXX2 1392 aa23.33■■□□□ 1.33
MRPL49-205ENST00000528529 PNPLA6Q8IY17 1366 aa23.31■■□□□ 1.32
MRPL49-205ENST00000528529 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
MRPL49-205ENST00000528529 PIK3C2GO75747 1445 aa23.28■■□□□ 1.32
MRPL49-205ENST00000528529 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
MRPL49-205ENST00000528529 STK26Q9P289 416 aa23.27■■□□□ 1.32
MRPL49-205ENST00000528529 AFF2P51816 1311 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms