RNA–Protein interactions for RNA: ENST00000528182.5

SDHD-206, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-206ENST00000528182 PROSER2Q86WR7 435 aaPredicted RBP27.52■■■□□ 2
SDHD-206ENST00000528182 ROCK1Q13464 1354 aa27.51■■□□□ 1.99
SDHD-206ENST00000528182 HDGFP51858 240 aaKnown RBP27.5■■□□□ 1.99
SDHD-206ENST00000528182 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
SDHD-206ENST00000528182 FAM135BQ49AJ0 1406 aa27.5■■□□□ 1.99
SDHD-206ENST00000528182 NWD1Q149M9 1564 aa27.49■■□□□ 1.99
SDHD-206ENST00000528182 NKTRP30414 1462 aaKnown RBP27.49■■□□□ 1.99
SDHD-206ENST00000528182 TMEM131LA2VDJ0 1609 aa27.49■■□□□ 1.99
SDHD-206ENST00000528182 E9PCH4 1651 aa27.47■■□□□ 1.99
SDHD-206ENST00000528182 PPP1R15AO75807 674 aaPredicted RBP27.47■■□□□ 1.99
SDHD-206ENST00000528182 RIMS2Q9UQ26 1411 aa27.47■■□□□ 1.99
SDHD-206ENST00000528182 PLEKHG1Q9ULL1 1385 aa27.47■■□□□ 1.99
SDHD-206ENST00000528182 RBM33Q96EV2 1170 aaKnown RBP27.46■■□□□ 1.99
SDHD-206ENST00000528182 IQGAP3Q86VI3 1631 aa27.45■■□□□ 1.98
SDHD-206ENST00000528182 CHD2O14647 1828 aaKnown RBP27.43■■□□□ 1.98
SDHD-206ENST00000528182 CHGAP10645 457 aaKnown RBP27.42■■□□□ 1.98
SDHD-206ENST00000528182 ROBO1Q9Y6N7 1651 aa27.41■■□□□ 1.98
SDHD-206ENST00000528182 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.41■■□□□ 1.98
SDHD-206ENST00000528182 MSH6P52701 1360 aa27.4■■□□□ 1.98
SDHD-206ENST00000528182 ITGAEP38570 1179 aa27.4■■□□□ 1.98
SDHD-206ENST00000528182 NUP155O75694 1391 aa27.39■■□□□ 1.98
SDHD-206ENST00000528182 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
SDHD-206ENST00000528182 NUTM2DQ5VT03 806 aaPredicted RBP27.34■■□□□ 1.97
SDHD-206ENST00000528182 PPARGC1BQ86YN6 1023 aaKnown RBP27.34■■□□□ 1.97
SDHD-206ENST00000528182 SLAIN2Q9P270 581 aa27.33■■□□□ 1.97
SDHD-206ENST00000528182 ADAMTS13Q76LX8 1427 aa27.32■■□□□ 1.96
SDHD-206ENST00000528182 DIP2AQ14689 1571 aa27.31■■□□□ 1.96
SDHD-206ENST00000528182 RGS17Q9UGC6 210 aaPredicted RBP27.3■■□□□ 1.96
SDHD-206ENST00000528182 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
SDHD-206ENST00000528182 PIK3R4Q99570 1358 aa27.28■■□□□ 1.96
SDHD-206ENST00000528182 PHLPP1O60346 1717 aa27.26■■□□□ 1.95
SDHD-206ENST00000528182 C14orf37Q86TY3 774 aa27.25■■□□□ 1.95
SDHD-206ENST00000528182 SPHKAPQ2M3C7 1700 aa27.24■■□□□ 1.95
SDHD-206ENST00000528182 TRPM2O94759 1503 aa27.23■■□□□ 1.95
SDHD-206ENST00000528182 C19orf44Q9H6X5 657 aa27.2■■□□□ 1.94
SDHD-206ENST00000528182 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.2■■□□□ 1.94
SDHD-206ENST00000528182 CADPS2Q86UW7 1296 aa27.19■■□□□ 1.94
SDHD-206ENST00000528182 AMOTL2Q9Y2J4 779 aa27.19■■□□□ 1.94
SDHD-206ENST00000528182 JCADQ9P266 1359 aa27.18■■□□□ 1.94
SDHD-206ENST00000528182 ATF3P18847 181 aa27.17■■□□□ 1.94
SDHD-206ENST00000528182 PTPRUQ92729 1446 aa27.16■■□□□ 1.94
SDHD-206ENST00000528182 ZNF326Q5BKZ1 582 aaKnown RBP27.16■■□□□ 1.94
SDHD-206ENST00000528182 RRBP1Q9P2E9 1410 aaKnown RBP27.16■■□□□ 1.94
SDHD-206ENST00000528182 COL16A1Q07092 1604 aaPredicted RBP27.15■■□□□ 1.94
SDHD-206ENST00000528182 NRXN3Q9Y4C0 1643 aa27.15■■□□□ 1.94
SDHD-206ENST00000528182 SETBP1Q9Y6X0 1596 aa27.14■■□□□ 1.94
SDHD-206ENST00000528182 POTEAQ6S8J7 498 aa27.14■■□□□ 1.94
SDHD-206ENST00000528182 XRN1Q8IZH2 1706 aaKnown RBP27.1■■□□□ 1.93
SDHD-206ENST00000528182 NAIPQ13075 1403 aa27.1■■□□□ 1.93
SDHD-206ENST00000528182 CLTCL1P53675 1640 aa27.1■■□□□ 1.93
SDHD-206ENST00000528182 AHDC1Q5TGY3 1603 aaPredicted RBP27.09■■□□□ 1.93
SDHD-206ENST00000528182 KIF1BO60333 1816 aa27.07■■□□□ 1.92
SDHD-206ENST00000528182 DCCP43146 1447 aa27.07■■□□□ 1.92
SDHD-206ENST00000528182 SPATA31A6Q5VVP1 1343 aa27.06■■□□□ 1.92
SDHD-206ENST00000528182 NEXMIFQ5QGS0 1516 aa27.06■■□□□ 1.92
SDHD-206ENST00000528182 METP08581 1390 aa27.05■■□□□ 1.92
SDHD-206ENST00000528182 BRINP3Q76B58 766 aa27.04■■□□□ 1.92
SDHD-206ENST00000528182 SHPRHQ149N8 1683 aa27.02■■□□□ 1.92
SDHD-206ENST00000528182 TRIM52Q96A61 297 aa27.01■■□□□ 1.91
SDHD-206ENST00000528182 LRP6O75581 1613 aa27■■□□□ 1.91
SDHD-206ENST00000528182 HFM1A2PYH4 1435 aa26.99■■□□□ 1.91
SDHD-206ENST00000528182 MEX3CQ5U5Q3 659 aaKnown RBP26.99■■□□□ 1.91
SDHD-206ENST00000528182 MST1RQ04912 1400 aa26.98■■□□□ 1.91
SDHD-206ENST00000528182 ASXL1Q8IXJ9 1541 aa26.97■■□□□ 1.91
SDHD-206ENST00000528182 ADGRL3Q9HAR2 1447 aa26.95■■□□□ 1.9
SDHD-206ENST00000528182 VGFO15240 615 aaPredicted RBP26.94■■□□□ 1.9
SDHD-206ENST00000528182 SLC4A1APQ9BWU0 796 aaKnown RBP26.94■■□□□ 1.9
SDHD-206ENST00000528182 ZNF772Q68DY9 489 aaPredicted RBP26.93■■□□□ 1.9
SDHD-206ENST00000528182 NHSL1Q5SYE7 1610 aa26.92■■□□□ 1.9
SDHD-206ENST00000528182 NALCNQ8IZF0 1738 aa26.92■■□□□ 1.9
SDHD-206ENST00000528182 SETD1AO15047 1707 aaKnown RBP26.91■■□□□ 1.9
SDHD-206ENST00000528182 RPGRIP1LQ68CZ1 1315 aa26.9■■□□□ 1.9
SDHD-206ENST00000528182 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
SDHD-206ENST00000528182 NUTM2BA6NNL0 878 aaPredicted RBP26.88■■□□□ 1.89
SDHD-206ENST00000528182 NUTM2EB1AL46 878 aaPredicted RBP26.88■■□□□ 1.89
SDHD-206ENST00000528182 NUTM2AQ8IVF1 878 aaPredicted RBP26.88■■□□□ 1.89
SDHD-206ENST00000528182 LRRC59Q96AG4 307 aaKnown RBP26.87■■□□□ 1.89
SDHD-206ENST00000528182 PTCH1Q13635 1447 aa26.87■■□□□ 1.89
SDHD-206ENST00000528182 PPLO60437 1756 aa26.86■■□□□ 1.89
SDHD-206ENST00000528182 DDX17Q92841 729 aaKnown RBP26.83■■□□□ 1.89
SDHD-206ENST00000528182 ROBO2Q9HCK4 1378 aa26.83■■□□□ 1.88
SDHD-206ENST00000528182 C1orf167Q5SNV9 1468 aa26.82■■□□□ 1.88
SDHD-206ENST00000528182 PRAG1Q86YV5 1406 aa26.81■■□□□ 1.88
SDHD-206ENST00000528182 FOXD1Q16676 465 aa26.79■■□□□ 1.88
SDHD-206ENST00000528182 RXRBP28702 533 aa26.78■■□□□ 1.88
SDHD-206ENST00000528182 PNPLA6Q8IY17 1366 aa26.78■■□□□ 1.88
SDHD-206ENST00000528182 AFF2P51816 1311 aa26.76■■□□□ 1.87
SDHD-206ENST00000528182 LAMC1P11047 1609 aa26.76■■□□□ 1.87
SDHD-206ENST00000528182 CCDC144AA2RUR9 1427 aa26.75■■□□□ 1.87
SDHD-206ENST00000528182 ORAI2Q96SN7 254 aa26.74■■□□□ 1.87
SDHD-206ENST00000528182 C8orf37Q96NL8 207 aa26.72■■□□□ 1.87
SDHD-206ENST00000528182 CDK12Q9NYV4 1490 aaPredicted RBP26.71■■□□□ 1.87
SDHD-206ENST00000528182 MPHOSPH9Q99550 1183 aa26.71■■□□□ 1.87
SDHD-206ENST00000528182 SOS2Q07890 1332 aaPredicted RBP26.7■■□□□ 1.87
SDHD-206ENST00000528182 ADGRF5Q8IZF2 1346 aa26.7■■□□□ 1.87
SDHD-206ENST00000528182 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
SDHD-206ENST00000528182 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
SDHD-206ENST00000528182 UPF1Q92900 1129 aaKnown RBP eCLIP26.68■■□□□ 1.86
SDHD-206ENST00000528182 ANKRD30BQ9BXX2 1392 aa26.68■■□□□ 1.86
SDHD-206ENST00000528182 IFT172Q9UG01 1749 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms