RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
CAPN1-204ENST00000526468 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
CAPN1-204ENST00000526468 SPHKAPQ2M3C7 1700 aa18.22■□□□□ 0.51
CAPN1-204ENST00000526468 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
CAPN1-204ENST00000526468 IDI1Q13907 227 aa18.2■□□□□ 0.5
CAPN1-204ENST00000526468 ZFYVE9O95405 1425 aa18.19■□□□□ 0.5
CAPN1-204ENST00000526468 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
CAPN1-204ENST00000526468 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
CAPN1-204ENST00000526468 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
CAPN1-204ENST00000526468 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
CAPN1-204ENST00000526468 BCANQ96GW7 911 aa18.15■□□□□ 0.5
CAPN1-204ENST00000526468 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-204ENST00000526468 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
CAPN1-204ENST00000526468 KCNA6P17658 529 aa18.14■□□□□ 0.49
CAPN1-204ENST00000526468 PLEKHG1Q9ULL1 1385 aa18.14■□□□□ 0.49
CAPN1-204ENST00000526468 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-204ENST00000526468 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
CAPN1-204ENST00000526468 MSH6P52701 1360 aa18.13■□□□□ 0.49
CAPN1-204ENST00000526468 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-204ENST00000526468 KIF1BO60333 1816 aa18.12■□□□□ 0.49
CAPN1-204ENST00000526468 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-204ENST00000526468 RBM33Q96EV2 1170 aaKnown RBP18.11■□□□□ 0.49
CAPN1-204ENST00000526468 TRPM2O94759 1503 aa18.11■□□□□ 0.49
CAPN1-204ENST00000526468 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
CAPN1-204ENST00000526468 ROCK1Q13464 1354 aa18.09■□□□□ 0.49
CAPN1-204ENST00000526468 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
CAPN1-204ENST00000526468 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
CAPN1-204ENST00000526468 CHGAP10645 457 aaKnown RBP18.06■□□□□ 0.48
CAPN1-204ENST00000526468 ADAMTS13Q76LX8 1427 aa18.05■□□□□ 0.48
CAPN1-204ENST00000526468 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
CAPN1-204ENST00000526468 AHDC1Q5TGY3 1603 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-204ENST00000526468 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
CAPN1-204ENST00000526468 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
CAPN1-204ENST00000526468 HDGFP51858 240 aaKnown RBP18.01■□□□□ 0.47
CAPN1-204ENST00000526468 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-204ENST00000526468 NUP155O75694 1391 aa18.01■□□□□ 0.47
CAPN1-204ENST00000526468 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
CAPN1-204ENST00000526468 NUTM2DQ5VT03 806 aaPredicted RBP18■□□□□ 0.47
CAPN1-204ENST00000526468 C14orf37Q86TY3 774 aa18■□□□□ 0.47
CAPN1-204ENST00000526468 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
CAPN1-204ENST00000526468 ITGAEP38570 1179 aa17.99■□□□□ 0.47
CAPN1-204ENST00000526468 PIK3R4Q99570 1358 aa17.98■□□□□ 0.47
CAPN1-204ENST00000526468 JCADQ9P266 1359 aa17.98■□□□□ 0.47
CAPN1-204ENST00000526468 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
CAPN1-204ENST00000526468 LRP6O75581 1613 aa17.97■□□□□ 0.47
CAPN1-204ENST00000526468 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
CAPN1-204ENST00000526468 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
CAPN1-204ENST00000526468 PPLO60437 1756 aa17.95■□□□□ 0.46
CAPN1-204ENST00000526468 TBX22Q9Y458 520 aa17.95■□□□□ 0.46
CAPN1-204ENST00000526468 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
CAPN1-204ENST00000526468 PTPRUQ92729 1446 aa17.94■□□□□ 0.46
CAPN1-204ENST00000526468 DCCP43146 1447 aa17.92■□□□□ 0.46
CAPN1-204ENST00000526468 POTEAQ6S8J7 498 aa17.92■□□□□ 0.46
CAPN1-204ENST00000526468 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
CAPN1-204ENST00000526468 ATF3P18847 181 aa17.9■□□□□ 0.46
CAPN1-204ENST00000526468 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
CAPN1-204ENST00000526468 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
CAPN1-204ENST00000526468 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
CAPN1-204ENST00000526468 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
CAPN1-204ENST00000526468 C19orf44Q9H6X5 657 aa17.86■□□□□ 0.45
CAPN1-204ENST00000526468 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
CAPN1-204ENST00000526468 SPATA31A6Q5VVP1 1343 aa17.86■□□□□ 0.45
CAPN1-204ENST00000526468 MST1RQ04912 1400 aa17.86■□□□□ 0.45
CAPN1-204ENST00000526468 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
CAPN1-204ENST00000526468 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
CAPN1-204ENST00000526468 LAMC1P11047 1609 aa17.83■□□□□ 0.45
CAPN1-204ENST00000526468 NAIPQ13075 1403 aa17.83■□□□□ 0.45
CAPN1-204ENST00000526468 METP08581 1390 aa17.83■□□□□ 0.45
CAPN1-204ENST00000526468 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
CAPN1-204ENST00000526468 MARF1Q9Y4F3 1742 aaKnown RBP17.81■□□□□ 0.44
CAPN1-204ENST00000526468 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
CAPN1-204ENST00000526468 KNDC1Q76NI1 1749 aa17.78■□□□□ 0.44
CAPN1-204ENST00000526468 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
CAPN1-204ENST00000526468 SETD5Q9C0A6 1442 aa17.78■□□□□ 0.44
CAPN1-204ENST00000526468 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-204ENST00000526468 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
CAPN1-204ENST00000526468 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-204ENST00000526468 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-204ENST00000526468 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-204ENST00000526468 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
CAPN1-204ENST00000526468 COL22A1Q8NFW1 1626 aaPredicted RBP17.74■□□□□ 0.43
CAPN1-204ENST00000526468 PNPLA6Q8IY17 1366 aa17.73■□□□□ 0.43
CAPN1-204ENST00000526468 C1orf167Q5SNV9 1468 aa17.73■□□□□ 0.43
CAPN1-204ENST00000526468 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-204ENST00000526468 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
CAPN1-204ENST00000526468 AFF2P51816 1311 aa17.71■□□□□ 0.42
CAPN1-204ENST00000526468 FMN2Q9NZ56 1722 aa17.7■□□□□ 0.42
CAPN1-204ENST00000526468 ROBO2Q9HCK4 1378 aa17.7■□□□□ 0.42
CAPN1-204ENST00000526468 RGPD8O14715 1765 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-204ENST00000526468 DDX17Q92841 729 aaKnown RBP17.69■□□□□ 0.42
CAPN1-204ENST00000526468 KIF1AQ12756 1690 aa17.68■□□□□ 0.42
CAPN1-204ENST00000526468 RGS12O14924 1447 aa17.68■□□□□ 0.42
CAPN1-204ENST00000526468 RXRBP28702 533 aa17.66■□□□□ 0.42
CAPN1-204ENST00000526468 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
CAPN1-204ENST00000526468 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
CAPN1-204ENST00000526468 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.66■□□□□ 0.42
CAPN1-204ENST00000526468 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
CAPN1-204ENST00000526468 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
CAPN1-204ENST00000526468 VGFO15240 615 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-204ENST00000526468 ABCA3Q99758 1704 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms