RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
SSBP3-210ENST00000525990 NAIPQ13075 1403 aa18.4■□□□□ 0.54
SSBP3-210ENST00000525990 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
SSBP3-210ENST00000525990 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.54
SSBP3-210ENST00000525990 NWD1Q149M9 1564 aa18.39■□□□□ 0.53
SSBP3-210ENST00000525990 TOM1O60784 492 aa18.38■□□□□ 0.53
SSBP3-210ENST00000525990 HSPA1LP34931 641 aa18.38■□□□□ 0.53
SSBP3-210ENST00000525990 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
SSBP3-210ENST00000525990 CLTCL1P53675 1640 aa18.37■□□□□ 0.53
SSBP3-210ENST00000525990 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-210ENST00000525990 RBM33Q96EV2 1170 aaKnown RBP18.36■□□□□ 0.53
SSBP3-210ENST00000525990 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
SSBP3-210ENST00000525990 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
SSBP3-210ENST00000525990 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
SSBP3-210ENST00000525990 BCANQ96GW7 911 aa18.32■□□□□ 0.52
SSBP3-210ENST00000525990 TMEM94Q12767 1356 aa18.31■□□□□ 0.52
SSBP3-210ENST00000525990 MED1Q15648 1581 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-210ENST00000525990 KIF1BO60333 1816 aa18.31■□□□□ 0.52
SSBP3-210ENST00000525990 HFM1A2PYH4 1435 aa18.31■□□□□ 0.52
SSBP3-210ENST00000525990 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-210ENST00000525990 KCNA6P17658 529 aa18.3■□□□□ 0.52
SSBP3-210ENST00000525990 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
SSBP3-210ENST00000525990 ADAMTS13Q76LX8 1427 aa18.3■□□□□ 0.52
SSBP3-210ENST00000525990 TRPM2O94759 1503 aa18.29■□□□□ 0.52
SSBP3-210ENST00000525990 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
SSBP3-210ENST00000525990 DIP2AQ14689 1571 aa18.27■□□□□ 0.52
SSBP3-210ENST00000525990 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
SSBP3-210ENST00000525990 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
SSBP3-210ENST00000525990 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
SSBP3-210ENST00000525990 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSBP3-210ENST00000525990 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
SSBP3-210ENST00000525990 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
SSBP3-210ENST00000525990 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
SSBP3-210ENST00000525990 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
SSBP3-210ENST00000525990 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-210ENST00000525990 HDGFP51858 240 aaKnown RBP18.21■□□□□ 0.51
SSBP3-210ENST00000525990 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
SSBP3-210ENST00000525990 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
SSBP3-210ENST00000525990 PPLO60437 1756 aa18.19■□□□□ 0.5
SSBP3-210ENST00000525990 FOXD1Q16676 465 aa18.18■□□□□ 0.5
SSBP3-210ENST00000525990 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
SSBP3-210ENST00000525990 MSH6P52701 1360 aa18.17■□□□□ 0.5
SSBP3-210ENST00000525990 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
SSBP3-210ENST00000525990 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
SSBP3-210ENST00000525990 METP08581 1390 aa18.15■□□□□ 0.5
SSBP3-210ENST00000525990 PIK3R4Q99570 1358 aa18.15■□□□□ 0.5
SSBP3-210ENST00000525990 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.49
SSBP3-210ENST00000525990 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
SSBP3-210ENST00000525990 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
SSBP3-210ENST00000525990 COL16A1Q07092 1604 aaPredicted RBP18.1■□□□□ 0.49
SSBP3-210ENST00000525990 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
SSBP3-210ENST00000525990 SLAIN2Q9P270 581 aa18.1■□□□□ 0.49
SSBP3-210ENST00000525990 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
SSBP3-210ENST00000525990 SOCS7O14512 581 aa18.08■□□□□ 0.48
SSBP3-210ENST00000525990 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
SSBP3-210ENST00000525990 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
SSBP3-210ENST00000525990 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
SSBP3-210ENST00000525990 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
SSBP3-210ENST00000525990 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
SSBP3-210ENST00000525990 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
SSBP3-210ENST00000525990 SETD5Q9C0A6 1442 aa18.03■□□□□ 0.48
SSBP3-210ENST00000525990 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
SSBP3-210ENST00000525990 MST1RQ04912 1400 aa18.01■□□□□ 0.47
SSBP3-210ENST00000525990 ADGRL3Q9HAR2 1447 aa18.01■□□□□ 0.47
SSBP3-210ENST00000525990 ATF3P18847 181 aa18.01■□□□□ 0.47
SSBP3-210ENST00000525990 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-210ENST00000525990 RAB3GAP2Q9H2M9 1393 aa18.01■□□□□ 0.47
SSBP3-210ENST00000525990 DCCP43146 1447 aa18■□□□□ 0.47
SSBP3-210ENST00000525990 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
SSBP3-210ENST00000525990 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
SSBP3-210ENST00000525990 RGL3Q3MIN7 710 aa18■□□□□ 0.47
SSBP3-210ENST00000525990 CADPS2Q86UW7 1296 aa18■□□□□ 0.47
SSBP3-210ENST00000525990 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
SSBP3-210ENST00000525990 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
SSBP3-210ENST00000525990 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
SSBP3-210ENST00000525990 ADGRF5Q8IZF2 1346 aa17.98■□□□□ 0.47
SSBP3-210ENST00000525990 BRINP3Q76B58 766 aa17.98■□□□□ 0.47
SSBP3-210ENST00000525990 LRP6O75581 1613 aa17.98■□□□□ 0.47
SSBP3-210ENST00000525990 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
SSBP3-210ENST00000525990 JCADQ9P266 1359 aa17.95■□□□□ 0.46
SSBP3-210ENST00000525990 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
SSBP3-210ENST00000525990 DDX17Q92841 729 aaKnown RBP17.94■□□□□ 0.46
SSBP3-210ENST00000525990 PRAG1Q86YV5 1406 aa17.94■□□□□ 0.46
SSBP3-210ENST00000525990 PIK3C2GO75747 1445 aa17.92■□□□□ 0.46
SSBP3-210ENST00000525990 POTEAQ6S8J7 498 aa17.91■□□□□ 0.46
SSBP3-210ENST00000525990 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
SSBP3-210ENST00000525990 LAMC1P11047 1609 aa17.9■□□□□ 0.46
SSBP3-210ENST00000525990 ANKRD30BQ9BXX2 1392 aa17.9■□□□□ 0.46
SSBP3-210ENST00000525990 TMEM132EQ6IEE7 984 aa17.89■□□□□ 0.45
SSBP3-210ENST00000525990 CDC42BPGQ6DT37 1551 aa17.88■□□□□ 0.45
SSBP3-210ENST00000525990 STK26Q9P289 416 aa17.87■□□□□ 0.45
SSBP3-210ENST00000525990 PLEKHH1Q9ULM0 1364 aa17.87■□□□□ 0.45
SSBP3-210ENST00000525990 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
SSBP3-210ENST00000525990 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
SSBP3-210ENST00000525990 ORAI2Q96SN7 254 aa17.86■□□□□ 0.45
SSBP3-210ENST00000525990 TECPR2O15040 1411 aa17.86■□□□□ 0.45
SSBP3-210ENST00000525990 MYOM2P54296 1465 aa17.86■□□□□ 0.45
SSBP3-210ENST00000525990 WAPLQ7Z5K2 1190 aa17.85■□□□□ 0.45
SSBP3-210ENST00000525990 FMN2Q9NZ56 1722 aa17.85■□□□□ 0.45
SSBP3-210ENST00000525990 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms