RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PADI6	Q6TGC4	694 aa		11.91	□□□□□ -0.5
PCM1-223	ENST00000524356	TREML4	Q6UXN2	200 aa		11.91	□□□□□ -0.5
PCM1-223	ENST00000524356	LIAT1	Q6ZQX7	453 aa		11.9	□□□□□ -0.5
PCM1-223	ENST00000524356	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.9	□□□□□ -0.5
PCM1-223	ENST00000524356	FAM187A	A6NFU0	413 aa		11.89	□□□□□ -0.51
PCM1-223	ENST00000524356	PPEF1	O14829	653 aa	Predicted RBP	11.89	□□□□□ -0.51
PCM1-223	ENST00000524356	ANKLE1	Q8NAG6	615 aa		11.89	□□□□□ -0.51
PCM1-223	ENST00000524356	ST8SIA5	O15466	376 aa		11.88	□□□□□ -0.51
PCM1-223	ENST00000524356	GDF9	O60383	454 aa		11.88	□□□□□ -0.51
PCM1-223	ENST00000524356	ZNF697	Q5TEC3	545 aa		11.88	□□□□□ -0.51
PCM1-223	ENST00000524356	TNFRSF10A	O00220	468 aa		11.87	□□□□□ -0.51
PCM1-223	ENST00000524356	EYA1	Q99502	592 aa		11.87	□□□□□ -0.51
PCM1-223	ENST00000524356	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.87	□□□□□ -0.51
PCM1-223	ENST00000524356	PRR14	Q9BWN1	585 aa		11.86	□□□□□ -0.51
PCM1-223	ENST00000524356	S1PR4	O95977	384 aa		11.85	□□□□□ -0.51
PCM1-223	ENST00000524356	AAAS	Q9NRG9	546 aa		11.85	□□□□□ -0.51
PCM1-223	ENST00000524356	E2F4	Q16254	413 aa		11.84	□□□□□ -0.51
PCM1-223	ENST00000524356	SLC4A3	P48751	1232 aa		11.82	□□□□□ -0.52
PCM1-223	ENST00000524356	PLA2G2C	Q5R387	149 aa		11.8	□□□□□ -0.52
PCM1-223	ENST00000524356	ACTN4	O43707	911 aa	Known RBP	11.75	□□□□□ -0.53
PCM1-223	ENST00000524356	DACH1	Q9UI36	760 aa		11.75	□□□□□ -0.53
PCM1-223	ENST00000524356	ADH1B	P00325	375 aa		11.74	□□□□□ -0.53
PCM1-223	ENST00000524356	PKD2L1	Q9P0L9	805 aa		11.74	□□□□□ -0.53
PCM1-223	ENST00000524356	DNAJB2	P25686	324 aa		11.72	□□□□□ -0.53
PCM1-223	ENST00000524356	CRIPAK	Q8N1N5	446 aa		11.71	□□□□□ -0.53
PCM1-223	ENST00000524356	TMEM134	Q9H6X4	195 aa		11.71	□□□□□ -0.53
PCM1-223	ENST00000524356	WFS1	O76024	890 aa		11.7	□□□□□ -0.54
PCM1-223	ENST00000524356	CFH	P08603	1231 aa		11.7	□□□□□ -0.54
PCM1-223	ENST00000524356	FOXC1	Q12948	553 aa		11.69	□□□□□ -0.54
PCM1-223	ENST00000524356	KMT5B	Q4FZB7	885 aa		11.69	□□□□□ -0.54
PCM1-223	ENST00000524356	SLC6A16	Q9GZN6	736 aa		11.69	□□□□□ -0.54
PCM1-223	ENST00000524356	GMPR2	Q9P2T1	348 aa	Known RBP	11.68	□□□□□ -0.54
PCM1-223	ENST00000524356	NFX1	Q12986	1120 aa	Known RBP	11.67	□□□□□ -0.54
PCM1-223	ENST00000524356	LMOD2	Q6P5Q4	547 aa		11.66	□□□□□ -0.54
PCM1-223	ENST00000524356	STK17A	Q9UEE5	414 aa		11.66	□□□□□ -0.54
PCM1-223	ENST00000524356	AVP	P01185	164 aa		11.65	□□□□□ -0.54
PCM1-223	ENST00000524356	SLC10A3	P09131	477 aa		11.65	□□□□□ -0.54
PCM1-223	ENST00000524356	BBX	Q8WY36	941 aa	Predicted RBP	11.65	□□□□□ -0.54
PCM1-223	ENST00000524356	NR1I2	O75469	434 aa		11.64	□□□□□ -0.55
PCM1-223	ENST00000524356	TOR4A	Q9NXH8	423 aa		11.64	□□□□□ -0.55
PCM1-223	ENST00000524356	ADGRG1	Q9Y653	693 aa		11.64	□□□□□ -0.55
PCM1-223	ENST00000524356	C11orf95	C9JLR9	678 aa	Predicted RBP	11.63	□□□□□ -0.55
PCM1-223	ENST00000524356	WIPF1	O43516	503 aa		11.63	□□□□□ -0.55
PCM1-223	ENST00000524356	RCCD1	A6NED2	376 aa		11.62	□□□□□ -0.55
PCM1-223	ENST00000524356	LCE2C	Q5TA81	110 aa		11.62	□□□□□ -0.55
PCM1-223	ENST00000524356	RBM46	Q8TBY0	533 aa	Known RBP	11.62	□□□□□ -0.55
PCM1-223	ENST00000524356	WDR70	Q9NW82	654 aa		11.62	□□□□□ -0.55
PCM1-223	ENST00000524356	PTGDR	Q13258	359 aa		11.61	□□□□□ -0.55
PCM1-223	ENST00000524356	FAM161A	Q3B820	660 aa		11.61	□□□□□ -0.55
PCM1-223	ENST00000524356	AXIN1	O15169	862 aa		11.6	□□□□□ -0.55
PCM1-223	ENST00000524356	SCUBE3	Q8IX30	993 aa		11.6	□□□□□ -0.55
PCM1-223	ENST00000524356	MLLT3	P42568	568 aa	Predicted RBP	11.57	□□□□□ -0.56
PCM1-223	ENST00000524356	RPIA	P49247	311 aa		11.57	□□□□□ -0.56
PCM1-223	ENST00000524356	PUS10	Q3MIT2	529 aa	Known RBP	11.57	□□□□□ -0.56
PCM1-223	ENST00000524356	SPSB2	Q99619	263 aa		11.57	□□□□□ -0.56
PCM1-223	ENST00000524356	SMCP	P49901	116 aa	Predicted RBP	11.56	□□□□□ -0.56
PCM1-223	ENST00000524356	INSM1	Q01101	510 aa	Predicted RBP	11.56	□□□□□ -0.56
PCM1-223	ENST00000524356	CTC1	Q2NKJ3	1217 aa		11.56	□□□□□ -0.56
PCM1-223	ENST00000524356	SPRYD3	Q8NCJ5	442 aa		11.56	□□□□□ -0.56
PCM1-223	ENST00000524356	CYP4X1	Q8N118	509 aa		11.55	□□□□□ -0.56
PCM1-223	ENST00000524356	FCF1	Q9Y324	198 aa	Known RBP	11.52	□□□□□ -0.57
PCM1-223	ENST00000524356	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.49	□□□□□ -0.57
PCM1-223	ENST00000524356	CD2BP2	O95400	341 aa	Known RBP	11.49	□□□□□ -0.57
PCM1-223	ENST00000524356	SNRPB	P14678	240 aa	Known RBP	11.49	□□□□□ -0.57
PCM1-223	ENST00000524356	TERT	O14746	1132 aa	Known RBP	11.47	□□□□□ -0.57
PCM1-223	ENST00000524356	THAP11	Q96EK4	314 aa		11.47	□□□□□ -0.57
PCM1-223	ENST00000524356	ATP13A2	Q9NQ11	1180 aa		11.46	□□□□□ -0.57
PCM1-223	ENST00000524356	FAM160A2	Q8N612	972 aa	Predicted RBP	11.45	□□□□□ -0.58
PCM1-223	ENST00000524356	SMPD1	P17405	629 aa		11.44	□□□□□ -0.58
PCM1-223	ENST00000524356	PXYLP1	Q8TE99	480 aa		11.44	□□□□□ -0.58
PCM1-223	ENST00000524356	PRDM9	Q9NQV7	894 aa		11.44	□□□□□ -0.58
PCM1-223	ENST00000524356	LOC100996750	A0A140TA64	210 aa		11.43	□□□□□ -0.58
PCM1-223	ENST00000524356	TTC24	A2A3L6	582 aa	Predicted RBP	11.43	□□□□□ -0.58
PCM1-223	ENST00000524356	MORN1	Q5T089	497 aa		11.43	□□□□□ -0.58
PCM1-223	ENST00000524356	KRTAP4-6	Q9BYQ5	205 aa		11.43	□□□□□ -0.58
PCM1-223	ENST00000524356	TRIM47	Q96LD4	638 aa		11.42	□□□□□ -0.58
PCM1-223	ENST00000524356	NUTM2F	A1L443	756 aa		11.41	□□□□□ -0.58
PCM1-223	ENST00000524356	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.39	□□□□□ -0.59
PCM1-223	ENST00000524356	WNT7A	O00755	349 aa		11.38	□□□□□ -0.59
PCM1-223	ENST00000524356	FUT2	Q10981	343 aa		11.38	□□□□□ -0.59
PCM1-223	ENST00000524356	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.37	□□□□□ -0.59
PCM1-223	ENST00000524356	SNIP1	Q8TAD8	396 aa	Known RBP	11.37	□□□□□ -0.59
PCM1-223	ENST00000524356	ARHGEF1	Q92888	912 aa	Known RBP	11.37	□□□□□ -0.59
PCM1-223	ENST00000524356	CFAP44	Q96MT7	982 aa		11.37	□□□□□ -0.59
PCM1-223	ENST00000524356	SLC27A5	Q9Y2P5	690 aa		11.37	□□□□□ -0.59
PCM1-223	ENST00000524356		J3QL48	77 aa		11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	FCHSD2	O94868	740 aa		11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	FMNL1	O95466	1100 aa	Predicted RBP	11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	OAT	P04181	439 aa		11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	RSPH4A	Q5TD94	716 aa		11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	METTL3	Q86U44	580 aa	Known RBP	11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	SENP2	Q9HC62	589 aa		11.36	□□□□□ -0.59
PCM1-223	ENST00000524356	MRGPRX2	Q96LB1	330 aa		11.34	□□□□□ -0.59
PCM1-223	ENST00000524356	ZBTB24	O43167	697 aa	Predicted RBP	11.33	□□□□□ -0.6
PCM1-223	ENST00000524356	LOR	P23490	312 aa	Predicted RBP	11.33	□□□□□ -0.6
PCM1-223	ENST00000524356	ATP6V1A	P38606	617 aa		11.33	□□□□□ -0.6
PCM1-223	ENST00000524356	BRICD5	Q6PL45	260 aa		11.33	□□□□□ -0.6
PCM1-223	ENST00000524356	KCNV2	Q8TDN2	545 aa		11.33	□□□□□ -0.6
PCM1-223	ENST00000524356	HPS1	Q92902	700 aa		11.33	□□□□□ -0.6
PCM1-223	ENST00000524356	TRIM32	Q13049	653 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms