RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
NPM1-212ENST00000524204 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
NPM1-212ENST00000524204 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
NPM1-212ENST00000524204 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
NPM1-212ENST00000524204 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
NPM1-212ENST00000524204 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
NPM1-212ENST00000524204 GDF9O60383 454 aa12.28□□□□□ -0.44
NPM1-212ENST00000524204 EYA1Q99502 592 aa12.28□□□□□ -0.44
NPM1-212ENST00000524204 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
NPM1-212ENST00000524204 ST8SIA5O15466 376 aa12.27□□□□□ -0.45
NPM1-212ENST00000524204 ZNF697Q5TEC3 545 aa12.26□□□□□ -0.45
NPM1-212ENST00000524204 ANKLE1Q8NAG6 615 aa12.26□□□□□ -0.45
NPM1-212ENST00000524204 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
NPM1-212ENST00000524204 E2F4Q16254 413 aa12.25□□□□□ -0.45
NPM1-212ENST00000524204 S1PR4O95977 384 aa12.24□□□□□ -0.45
NPM1-212ENST00000524204 AAASQ9NRG9 546 aa12.24□□□□□ -0.45
NPM1-212ENST00000524204 PLA2G2CQ5R387 149 aa12.2□□□□□ -0.46
NPM1-212ENST00000524204 PRR14Q9BWN1 585 aa12.2□□□□□ -0.46
NPM1-212ENST00000524204 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
NPM1-212ENST00000524204 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
NPM1-212ENST00000524204 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
NPM1-212ENST00000524204 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
NPM1-212ENST00000524204 ADH1BP00325 375 aa12.1□□□□□ -0.47
NPM1-212ENST00000524204 DNAJB2P25686 324 aa12.09□□□□□ -0.47
NPM1-212ENST00000524204 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
NPM1-212ENST00000524204 FOXC1Q12948 553 aa12.08□□□□□ -0.48
NPM1-212ENST00000524204 WFS1O76024 890 aa12.07□□□□□ -0.48
NPM1-212ENST00000524204 CFHP08603 1231 aa12.07□□□□□ -0.48
NPM1-212ENST00000524204 SLC10A3P09131 477 aa12.07□□□□□ -0.48
NPM1-212ENST00000524204 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
NPM1-212ENST00000524204 SLC6A16Q9GZN6 736 aa12.07□□□□□ -0.48
NPM1-212ENST00000524204 GMPR2Q9P2T1 348 aaKnown RBP12.07□□□□□ -0.48
NPM1-212ENST00000524204 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
NPM1-212ENST00000524204 CRIPAKQ8N1N5 446 aa12.06□□□□□ -0.48
NPM1-212ENST00000524204 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
NPM1-212ENST00000524204 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
NPM1-212ENST00000524204 WDR70Q9NW82 654 aa12.03□□□□□ -0.48
NPM1-212ENST00000524204 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
NPM1-212ENST00000524204 RCCD1A6NED2 376 aa12.02□□□□□ -0.49
NPM1-212ENST00000524204 AVPP01185 164 aa12.02□□□□□ -0.49
NPM1-212ENST00000524204 SCUBE3Q8IX30 993 aa12.02□□□□□ -0.49
NPM1-212ENST00000524204 TOR4AQ9NXH8 423 aa12.02□□□□□ -0.49
NPM1-212ENST00000524204 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
NPM1-212ENST00000524204 NR1I2O75469 434 aa12.01□□□□□ -0.49
NPM1-212ENST00000524204 LCE2CQ5TA81 110 aa12.01□□□□□ -0.49
NPM1-212ENST00000524204 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
NPM1-212ENST00000524204 PTGDRQ13258 359 aa12□□□□□ -0.49
NPM1-212ENST00000524204 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
NPM1-212ENST00000524204 STK17AQ9UEE5 414 aa11.99□□□□□ -0.49
NPM1-212ENST00000524204 AXIN1O15169 862 aa11.98□□□□□ -0.49
NPM1-212ENST00000524204 WIPF1O43516 503 aa11.98□□□□□ -0.49
NPM1-212ENST00000524204 PUS10Q3MIT2 529 aaKnown RBP11.98□□□□□ -0.49
NPM1-212ENST00000524204 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
NPM1-212ENST00000524204 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
NPM1-212ENST00000524204 SPSB2Q99619 263 aa11.95□□□□□ -0.5
NPM1-212ENST00000524204 RPIAP49247 311 aa11.92□□□□□ -0.5
NPM1-212ENST00000524204 SMCPP49901 116 aaPredicted RBP11.92□□□□□ -0.5
NPM1-212ENST00000524204 CYP4X1Q8N118 509 aa11.92□□□□□ -0.5
NPM1-212ENST00000524204 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
NPM1-212ENST00000524204 INSM1Q01101 510 aaPredicted RBP11.9□□□□□ -0.5
NPM1-212ENST00000524204 FCF1Q9Y324 198 aaKnown RBP11.9□□□□□ -0.5
NPM1-212ENST00000524204 SNRPBP14678 240 aaKnown RBP11.88□□□□□ -0.51
NPM1-212ENST00000524204 CD2BP2O95400 341 aaKnown RBP11.87□□□□□ -0.51
NPM1-212ENST00000524204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
NPM1-212ENST00000524204 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
NPM1-212ENST00000524204 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
NPM1-212ENST00000524204 TERTO14746 1132 aaKnown RBP11.83□□□□□ -0.52
NPM1-212ENST00000524204 PXYLP1Q8TE99 480 aa11.83□□□□□ -0.52
NPM1-212ENST00000524204 ATP13A2Q9NQ11 1180 aa11.83□□□□□ -0.52
NPM1-212ENST00000524204 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
NPM1-212ENST00000524204 TTC24A2A3L6 582 aaPredicted RBP11.82□□□□□ -0.52
NPM1-212ENST00000524204 SMPD1P17405 629 aa11.82□□□□□ -0.52
NPM1-212ENST00000524204 MORN1Q5T089 497 aa11.81□□□□□ -0.52
NPM1-212ENST00000524204 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
NPM1-212ENST00000524204 PRDM9Q9NQV7 894 aa11.81□□□□□ -0.52
NPM1-212ENST00000524204 PAXIP1Q6ZW49 1069 aaPredicted RBP11.8□□□□□ -0.52
NPM1-212ENST00000524204 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
NPM1-212ENST00000524204 LOC100996750A0A140TA64 210 aa11.77□□□□□ -0.53
NPM1-212ENST00000524204 FUT2Q10981 343 aa11.77□□□□□ -0.53
NPM1-212ENST00000524204 TRIM47Q96LD4 638 aa11.77□□□□□ -0.53
NPM1-212ENST00000524204 KRTAP4-6Q9BYQ5 205 aa11.77□□□□□ -0.53
NPM1-212ENST00000524204 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
NPM1-212ENST00000524204 J3QL48 77 aa11.76□□□□□ -0.53
NPM1-212ENST00000524204 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
NPM1-212ENST00000524204 SNIP1Q8TAD8 396 aaKnown RBP11.75□□□□□ -0.53
NPM1-212ENST00000524204 OATP04181 439 aa11.74□□□□□ -0.53
NPM1-212ENST00000524204 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
NPM1-212ENST00000524204 WNT7AO00755 349 aa11.73□□□□□ -0.53
NPM1-212ENST00000524204 FMNL1O95466 1100 aaPredicted RBP11.73□□□□□ -0.53
NPM1-212ENST00000524204 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
NPM1-212ENST00000524204 FCHSD2O94868 740 aa11.72□□□□□ -0.53
NPM1-212ENST00000524204 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
NPM1-212ENST00000524204 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
NPM1-212ENST00000524204 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
NPM1-212ENST00000524204 BRICD5Q6PL45 260 aa11.71□□□□□ -0.53
NPM1-212ENST00000524204 HPS1Q92902 700 aa11.71□□□□□ -0.53
NPM1-212ENST00000524204 MRGPRX2Q96LB1 330 aa11.71□□□□□ -0.53
NPM1-212ENST00000524204 ZBTB24O43167 697 aaPredicted RBP11.7□□□□□ -0.54
NPM1-212ENST00000524204 RDH13Q8NBN7 331 aa11.7□□□□□ -0.54
NPM1-212ENST00000524204 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms