RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 NBPF20Q3BBV1 942 aa8.28□□□□□ -1.08
NPM1-211ENST00000523622 LARGE2Q8N3Y3 721 aa8.28□□□□□ -1.08
NPM1-211ENST00000523622 STK25O00506 426 aa8.27□□□□□ -1.09
NPM1-211ENST00000523622 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
NPM1-211ENST00000523622 PSME1Q06323 249 aa8.27□□□□□ -1.09
NPM1-211ENST00000523622 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
NPM1-211ENST00000523622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.27□□□□□ -1.09
NPM1-211ENST00000523622 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
NPM1-211ENST00000523622 SOX12O15370 315 aa8.26□□□□□ -1.09
NPM1-211ENST00000523622 EPB41L2O43491 1005 aaKnown RBP8.26□□□□□ -1.09
NPM1-211ENST00000523622 IGBP1P78318 339 aa8.26□□□□□ -1.09
NPM1-211ENST00000523622 PABPN1Q86U42 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPM1-211ENST00000523622 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
NPM1-211ENST00000523622 CXorf38Q8TB03 319 aa8.26□□□□□ -1.09
NPM1-211ENST00000523622 CCDC85AQ96PX6 553 aaPredicted RBP8.26□□□□□ -1.09
NPM1-211ENST00000523622 SH3BP1Q9Y3L3 701 aa8.26□□□□□ -1.09
NPM1-211ENST00000523622 COMMD10Q9Y6G5 202 aa8.26□□□□□ -1.09
NPM1-211ENST00000523622 TBC1D12O60347 775 aa8.25□□□□□ -1.09
NPM1-211ENST00000523622 CEP120Q8N960 986 aa8.25□□□□□ -1.09
NPM1-211ENST00000523622 TSPAN18Q96SJ8 248 aa8.25□□□□□ -1.09
NPM1-211ENST00000523622 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
NPM1-211ENST00000523622 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
NPM1-211ENST00000523622 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
NPM1-211ENST00000523622 GOLIM4O00461 696 aa8.24□□□□□ -1.09
NPM1-211ENST00000523622 POLD1P28340 1107 aa8.24□□□□□ -1.09
NPM1-211ENST00000523622 RHBDL3P58872 404 aa8.24□□□□□ -1.09
NPM1-211ENST00000523622 C4orf46Q504U0 113 aa8.24□□□□□ -1.09
NPM1-211ENST00000523622 ZNF280DQ6N043 979 aa8.24□□□□□ -1.09
NPM1-211ENST00000523622 NOP9Q86U38 636 aaKnown RBP8.24□□□□□ -1.09
NPM1-211ENST00000523622 CCER1Q8TC90 406 aaPredicted RBP8.24□□□□□ -1.09
NPM1-211ENST00000523622 GNL3LQ9NVN8 582 aaKnown RBP8.24□□□□□ -1.09
NPM1-211ENST00000523622 WDHD1O75717 1129 aaPredicted RBP8.23□□□□□ -1.09
NPM1-211ENST00000523622 ZRANB2O95218 330 aaKnown RBP eCLIP8.23□□□□□ -1.096e-8■■□□□ 12.3
NPM1-211ENST00000523622 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 GYS2P54840 703 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 PTPROQ16827 1216 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 ARMCX6Q7L4S7 300 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 GPIHBP1Q8IV16 184 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
NPM1-211ENST00000523622 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 GABBR1Q9UBS5 961 aa8.23□□□□□ -1.09
NPM1-211ENST00000523622 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
NPM1-211ENST00000523622 ZNF500O60304 480 aaPredicted RBP8.22□□□□□ -1.09
NPM1-211ENST00000523622 E2F4Q16254 413 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 C11orf96Q7Z7L8 435 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 AMOTL1Q8IY63 956 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 PNISRQ8TF01 805 aaKnown RBP8.22□□□□□ -1.09
NPM1-211ENST00000523622 HDAC5Q9UQL6 1122 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 COG6Q9Y2V7 657 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 NUB1Q9Y5A7 615 aa8.22□□□□□ -1.09
NPM1-211ENST00000523622 BDNFP23560 247 aa8.21□□□□□ -1.1
NPM1-211ENST00000523622 PPP4CP60510 307 aa8.21□□□□□ -1.1
NPM1-211ENST00000523622 EGFLAMQ63HQ2 1017 aa8.21□□□□□ -1.1
NPM1-211ENST00000523622 DNAJC14Q6Y2X3 702 aaPredicted RBP8.21□□□□□ -1.1
NPM1-211ENST00000523622 KCNB2Q92953 911 aa8.21□□□□□ -1.1
NPM1-211ENST00000523622 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 GOLGA6CA6NDK9 693 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 GOLGA6BA6NDN3 693 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 GOLGA6DP0CG33 693 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 GET4Q7L5D6 327 aaPredicted RBP8.2□□□□□ -1.1
NPM1-211ENST00000523622 HELBQ8NG08 1087 aaPredicted RBP8.2□□□□□ -1.1
NPM1-211ENST00000523622 MKL1Q969V6 931 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 PBXIP1Q96AQ6 731 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 TRIM44Q96DX7 344 aaPredicted RBP8.2□□□□□ -1.1
NPM1-211ENST00000523622 GOLGA6AQ9NYA3 693 aa8.2□□□□□ -1.1
NPM1-211ENST00000523622 ZNF219Q9P2Y4 722 aaPredicted RBP8.2□□□□□ -1.1
NPM1-211ENST00000523622 STK10O94804 968 aaKnown RBP8.19□□□□□ -1.1
NPM1-211ENST00000523622 COPB2P35606 906 aa8.19□□□□□ -1.1
NPM1-211ENST00000523622 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
NPM1-211ENST00000523622 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
NPM1-211ENST00000523622 SENP7Q9BQF6 1050 aa8.19□□□□□ -1.1
NPM1-211ENST00000523622 BCL2L13Q9BXK5 485 aa8.19□□□□□ -1.1
NPM1-211ENST00000523622 FBXO9Q9UK97 447 aaPredicted RBP8.19□□□□□ -1.1
NPM1-211ENST00000523622 DHX16O60231 1041 aaKnown RBP8.18□□□□□ -1.1
NPM1-211ENST00000523622 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
NPM1-211ENST00000523622 OTUD6BQ8N6M0 293 aa8.18□□□□□ -1.1
NPM1-211ENST00000523622 ANP32BQ92688 251 aaKnown RBP8.18□□□□□ -1.1
NPM1-211ENST00000523622 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
NPM1-211ENST00000523622 LNPKQ9C0E8 428 aa8.18□□□□□ -1.1
NPM1-211ENST00000523622 WWC3Q9ULE0 1092 aa8.18□□□□□ -1.1
NPM1-211ENST00000523622 FRMD4BQ9Y2L6 1034 aa8.18□□□□□ -1.1
NPM1-211ENST00000523622 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
NPM1-211ENST00000523622 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
NPM1-211ENST00000523622 CCDC146Q8IYE0 955 aa8.17□□□□□ -1.1
NPM1-211ENST00000523622 VRTNQ9H8Y1 702 aa8.17□□□□□ -1.1
NPM1-211ENST00000523622 ERBB3P21860 1342 aa8.17□□□□□ -1.1
NPM1-211ENST00000523622 CFAP69A5D8W1 941 aa8.16□□□□□ -1.1
NPM1-211ENST00000523622 SCP2P22307 547 aa8.16□□□□□ -1.1
NPM1-211ENST00000523622 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
NPM1-211ENST00000523622 NOM1Q5C9Z4 860 aaKnown RBP8.16□□□□□ -1.1
NPM1-211ENST00000523622 SDE2Q6IQ49 451 aa8.16□□□□□ -1.1
NPM1-211ENST00000523622 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
NPM1-211ENST00000523622 GIPC2Q8TF65 315 aa8.16□□□□□ -1.1
NPM1-211ENST00000523622 CALR3Q96L12 384 aaKnown RBP8.16□□□□□ -1.1
NPM1-211ENST00000523622 FEZ2Q9UHY8 353 aaPredicted RBP8.16□□□□□ -1.1
NPM1-211ENST00000523622 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms