RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 UNC13BO14795 1591 aa19.33■□□□□ 0.69
TOP1MT-217ENST00000523417 PROSER2Q86WR7 435 aaPredicted RBP19.33■□□□□ 0.68
TOP1MT-217ENST00000523417 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
TOP1MT-217ENST00000523417 RIMS2Q9UQ26 1411 aa19.31■□□□□ 0.68
TOP1MT-217ENST00000523417 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
TOP1MT-217ENST00000523417 ITGAEP38570 1179 aa19.28■□□□□ 0.68
TOP1MT-217ENST00000523417 BCANQ96GW7 911 aa19.28■□□□□ 0.68
TOP1MT-217ENST00000523417 TMEM131LA2VDJ0 1609 aa19.28■□□□□ 0.68
TOP1MT-217ENST00000523417 NKTRP30414 1462 aaKnown RBP19.28■□□□□ 0.68
TOP1MT-217ENST00000523417 NCOA3Q9Y6Q9 1424 aa19.27■□□□□ 0.68
TOP1MT-217ENST00000523417 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
TOP1MT-217ENST00000523417 PPP1R15AO75807 674 aaPredicted RBP19.27■□□□□ 0.68
TOP1MT-217ENST00000523417 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
TOP1MT-217ENST00000523417 RRBP1Q9P2E9 1410 aaKnown RBP19.25■□□□□ 0.67
TOP1MT-217ENST00000523417 PIK3R4Q99570 1358 aa19.25■□□□□ 0.67
TOP1MT-217ENST00000523417 XIRP1Q702N8 1843 aaKnown RBP19.25■□□□□ 0.67
TOP1MT-217ENST00000523417 NWD1Q149M9 1564 aa19.24■□□□□ 0.67
TOP1MT-217ENST00000523417 MED1Q15648 1581 aaPredicted RBP19.24■□□□□ 0.67
TOP1MT-217ENST00000523417 CHGAP10645 457 aaKnown RBP19.24■□□□□ 0.67
TOP1MT-217ENST00000523417 E9PCH4 1651 aa19.24■□□□□ 0.67
TOP1MT-217ENST00000523417 SLAIN2Q9P270 581 aa19.22■□□□□ 0.67
TOP1MT-217ENST00000523417 ADAMTS13Q76LX8 1427 aa19.22■□□□□ 0.67
TOP1MT-217ENST00000523417 RBM33Q96EV2 1170 aaKnown RBP19.21■□□□□ 0.67
TOP1MT-217ENST00000523417 MSH6P52701 1360 aa19.2■□□□□ 0.66
TOP1MT-217ENST00000523417 NAIPQ13075 1403 aa19.17■□□□□ 0.66
TOP1MT-217ENST00000523417 NUTM2DQ5VT03 806 aaPredicted RBP19.17■□□□□ 0.66
TOP1MT-217ENST00000523417 C19orf44Q9H6X5 657 aa19.17■□□□□ 0.66
TOP1MT-217ENST00000523417 CHD2O14647 1828 aaKnown RBP19.16■□□□□ 0.66
TOP1MT-217ENST00000523417 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
TOP1MT-217ENST00000523417 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
TOP1MT-217ENST00000523417 MYO5BQ9ULV0 1848 aa19.15■□□□□ 0.66
TOP1MT-217ENST00000523417 DIP2AQ14689 1571 aa19.15■□□□□ 0.66
TOP1MT-217ENST00000523417 CADPS2Q86UW7 1296 aa19.14■□□□□ 0.65
TOP1MT-217ENST00000523417 RGS17Q9UGC6 210 aaPredicted RBP19.13■□□□□ 0.65
TOP1MT-217ENST00000523417 HFM1A2PYH4 1435 aa19.11■□□□□ 0.65
TOP1MT-217ENST00000523417 PTPRUQ92729 1446 aa19.1■□□□□ 0.65
TOP1MT-217ENST00000523417 ZNF326Q5BKZ1 582 aaKnown RBP19.09■□□□□ 0.65
TOP1MT-217ENST00000523417 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
TOP1MT-217ENST00000523417 ATF3P18847 181 aa19.08■□□□□ 0.64
TOP1MT-217ENST00000523417 TRPM2O94759 1503 aa19.08■□□□□ 0.64
TOP1MT-217ENST00000523417 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
TOP1MT-217ENST00000523417 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
TOP1MT-217ENST00000523417 RPGRIP1LQ68CZ1 1315 aa19.06■□□□□ 0.64
TOP1MT-217ENST00000523417 JCADQ9P266 1359 aa19.06■□□□□ 0.64
TOP1MT-217ENST00000523417 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
TOP1MT-217ENST00000523417 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
TOP1MT-217ENST00000523417 METP08581 1390 aa19.05■□□□□ 0.64
TOP1MT-217ENST00000523417 DCCP43146 1447 aa19.04■□□□□ 0.64
TOP1MT-217ENST00000523417 SPHKAPQ2M3C7 1700 aa19.04■□□□□ 0.64
TOP1MT-217ENST00000523417 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
TOP1MT-217ENST00000523417 NRXN3Q9Y4C0 1643 aa19.01■□□□□ 0.63
TOP1MT-217ENST00000523417 BRINP3Q76B58 766 aa19■□□□□ 0.63
TOP1MT-217ENST00000523417 NEXMIFQ5QGS0 1516 aa19■□□□□ 0.63
TOP1MT-217ENST00000523417 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
TOP1MT-217ENST00000523417 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
TOP1MT-217ENST00000523417 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
TOP1MT-217ENST00000523417 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.99■□□□□ 0.63
TOP1MT-217ENST00000523417 CLTCL1P53675 1640 aa18.99■□□□□ 0.63
TOP1MT-217ENST00000523417 XRN1Q8IZH2 1706 aaKnown RBP18.97■□□□□ 0.63
TOP1MT-217ENST00000523417 AHDC1Q5TGY3 1603 aaPredicted RBP18.95■□□□□ 0.62
TOP1MT-217ENST00000523417 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
TOP1MT-217ENST00000523417 MST1RQ04912 1400 aa18.94■□□□□ 0.62
TOP1MT-217ENST00000523417 PRAG1Q86YV5 1406 aa18.94■□□□□ 0.62
TOP1MT-217ENST00000523417 COL16A1Q07092 1604 aaPredicted RBP18.94■□□□□ 0.62
TOP1MT-217ENST00000523417 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
TOP1MT-217ENST00000523417 MPHOSPH9Q99550 1183 aa18.93■□□□□ 0.62
TOP1MT-217ENST00000523417 SETD5Q9C0A6 1442 aa18.91■□□□□ 0.62
TOP1MT-217ENST00000523417 LRRC59Q96AG4 307 aaKnown RBP18.91■□□□□ 0.62
TOP1MT-217ENST00000523417 PTCH1Q13635 1447 aa18.91■□□□□ 0.62
TOP1MT-217ENST00000523417 KIF1BO60333 1816 aa18.9■□□□□ 0.62
TOP1MT-217ENST00000523417 FOXD1Q16676 465 aa18.88■□□□□ 0.61
TOP1MT-217ENST00000523417 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
TOP1MT-217ENST00000523417 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
TOP1MT-217ENST00000523417 ASXL1Q8IXJ9 1541 aa18.86■□□□□ 0.61
TOP1MT-217ENST00000523417 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
TOP1MT-217ENST00000523417 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
TOP1MT-217ENST00000523417 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
TOP1MT-217ENST00000523417 LRP6O75581 1613 aa18.85■□□□□ 0.61
TOP1MT-217ENST00000523417 C1orf167Q5SNV9 1468 aa18.85■□□□□ 0.61
TOP1MT-217ENST00000523417 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
TOP1MT-217ENST00000523417 MEX3CQ5U5Q3 659 aaKnown RBP18.83■□□□□ 0.6
TOP1MT-217ENST00000523417 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
TOP1MT-217ENST00000523417 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
TOP1MT-217ENST00000523417 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
TOP1MT-217ENST00000523417 SETD1AO15047 1707 aaKnown RBP18.82■□□□□ 0.6
TOP1MT-217ENST00000523417 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
TOP1MT-217ENST00000523417 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
TOP1MT-217ENST00000523417 ORAI2Q96SN7 254 aa18.8■□□□□ 0.6
TOP1MT-217ENST00000523417 PPLO60437 1756 aa18.79■□□□□ 0.6
TOP1MT-217ENST00000523417 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
TOP1MT-217ENST00000523417 TECPR2O15040 1411 aa18.79■□□□□ 0.6
TOP1MT-217ENST00000523417 LRPPRCP42704 1394 aaKnown RBP18.79■□□□□ 0.6
TOP1MT-217ENST00000523417 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
TOP1MT-217ENST00000523417 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
TOP1MT-217ENST00000523417 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
TOP1MT-217ENST00000523417 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
TOP1MT-217ENST00000523417 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
TOP1MT-217ENST00000523417 HRCP23327 699 aa18.77■□□□□ 0.6
TOP1MT-217ENST00000523417 RXRBP28702 533 aa18.77■□□□□ 0.6
TOP1MT-217ENST00000523417 C14orf93Q9H972 538 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms