RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 EIF5BO60841 1220 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 COG6Q9Y2V7 657 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 BRD4O60885 1362 aaPredicted RBP16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 PPP2R1AP30153 589 aa16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 RIPK4P57078 832 aa16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 C11orf95C9JLR9 678 aaPredicted RBP16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 HMOX1P09601 288 aa16.53■□□□□ 0.24
PCDHGB1-201ENST00000523390 ADGRL1O94910 1474 aa16.52■□□□□ 0.24
PCDHGB1-201ENST00000523390 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.23
PCDHGB1-201ENST00000523390 RUNDC1Q96C34 613 aa16.52■□□□□ 0.23
PCDHGB1-201ENST00000523390 ATP10BO94823 1461 aa16.51■□□□□ 0.23
PCDHGB1-201ENST00000523390 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
PCDHGB1-201ENST00000523390 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
PCDHGB1-201ENST00000523390 PSME1Q06323 249 aa16.5■□□□□ 0.23
PCDHGB1-201ENST00000523390 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
PCDHGB1-201ENST00000523390 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
PCDHGB1-201ENST00000523390 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
PCDHGB1-201ENST00000523390 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
PCDHGB1-201ENST00000523390 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
PCDHGB1-201ENST00000523390 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
PCDHGB1-201ENST00000523390 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
PCDHGB1-201ENST00000523390 FGD1P98174 961 aa16.47■□□□□ 0.23
PCDHGB1-201ENST00000523390 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
PCDHGB1-201ENST00000523390 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
PCDHGB1-201ENST00000523390 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.23
PCDHGB1-201ENST00000523390 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
PCDHGB1-201ENST00000523390 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
PCDHGB1-201ENST00000523390 CABP1Q9NZU7 370 aa16.46■□□□□ 0.22
PCDHGB1-201ENST00000523390 UGGT2Q9NYU1 1516 aa16.45■□□□□ 0.22
PCDHGB1-201ENST00000523390 NLRP6P59044 892 aa16.45■□□□□ 0.22
PCDHGB1-201ENST00000523390 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
PCDHGB1-201ENST00000523390 TEFQ10587 303 aa16.45■□□□□ 0.22
PCDHGB1-201ENST00000523390 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
PCDHGB1-201ENST00000523390 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
PCDHGB1-201ENST00000523390 FANCAO15360 1455 aa16.44■□□□□ 0.22
PCDHGB1-201ENST00000523390 HMMRO75330 724 aa16.44■□□□□ 0.22
PCDHGB1-201ENST00000523390 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
PCDHGB1-201ENST00000523390 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
PCDHGB1-201ENST00000523390 CENPQQ7L2Z9 268 aaPredicted RBP16.43■□□□□ 0.22
PCDHGB1-201ENST00000523390 RPGRIP1LQ68CZ1 1315 aa16.43■□□□□ 0.22
PCDHGB1-201ENST00000523390 RPRD2Q5VT52 1461 aaKnown RBP16.42■□□□□ 0.22
PCDHGB1-201ENST00000523390 SLKQ9H2G2 1235 aaPredicted RBP16.42■□□□□ 0.22
PCDHGB1-201ENST00000523390 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
PCDHGB1-201ENST00000523390 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
PCDHGB1-201ENST00000523390 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
PCDHGB1-201ENST00000523390 ADGRF5Q8IZF2 1346 aa16.41■□□□□ 0.22
PCDHGB1-201ENST00000523390 MSH5O43196 834 aa16.41■□□□□ 0.22
PCDHGB1-201ENST00000523390 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
PCDHGB1-201ENST00000523390 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
PCDHGB1-201ENST00000523390 MCCP23508 829 aa16.4■□□□□ 0.22
PCDHGB1-201ENST00000523390 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
PCDHGB1-201ENST00000523390 IDI1Q13907 227 aa16.4■□□□□ 0.22
PCDHGB1-201ENST00000523390 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
PCDHGB1-201ENST00000523390 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
PCDHGB1-201ENST00000523390 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
PCDHGB1-201ENST00000523390 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
PCDHGB1-201ENST00000523390 PANK1Q8TE04 598 aa16.38■□□□□ 0.21
PCDHGB1-201ENST00000523390 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
PCDHGB1-201ENST00000523390 PDE4AP27815 886 aa16.38■□□□□ 0.21
PCDHGB1-201ENST00000523390 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
PCDHGB1-201ENST00000523390 KIAA1211Q6ZU35 1233 aa16.37■□□□□ 0.21
PCDHGB1-201ENST00000523390 ATF3P18847 181 aa16.37■□□□□ 0.21
PCDHGB1-201ENST00000523390 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
PCDHGB1-201ENST00000523390 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
PCDHGB1-201ENST00000523390 GNAI1P63096 354 aa16.36■□□□□ 0.21
PCDHGB1-201ENST00000523390 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
PCDHGB1-201ENST00000523390 WDR62O43379 1518 aa16.36■□□□□ 0.21
PCDHGB1-201ENST00000523390 WAPLQ7Z5K2 1190 aa16.36■□□□□ 0.21
PCDHGB1-201ENST00000523390 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 EVA1CP58658 441 aa16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 PLCH2O75038 1416 aa16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
PCDHGB1-201ENST00000523390 DENND4BO75064 1496 aaPredicted RBP16.34■□□□□ 0.21
PCDHGB1-201ENST00000523390 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
PCDHGB1-201ENST00000523390 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
PCDHGB1-201ENST00000523390 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
PCDHGB1-201ENST00000523390 TRIM44Q96DX7 344 aaPredicted RBP16.33■□□□□ 0.21
PCDHGB1-201ENST00000523390 SYCP2Q9BX26 1530 aa16.32■□□□□ 0.2
PCDHGB1-201ENST00000523390 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
PCDHGB1-201ENST00000523390 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
PCDHGB1-201ENST00000523390 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
PCDHGB1-201ENST00000523390 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
PCDHGB1-201ENST00000523390 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 NSD3Q9BZ95 1437 aa16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 TAF7LQ5H9L4 462 aa16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
PCDHGB1-201ENST00000523390 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
PCDHGB1-201ENST00000523390 ATAD2Q6PL18 1390 aa16.3■□□□□ 0.2
PCDHGB1-201ENST00000523390 TRAPPC8Q9Y2L5 1435 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms