RNA–Protein interactions for RNA: ENST00000522709.5

EFR3A-206, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-206ENST00000522709 SLC52A1Q9NWF4 448 aa28.73■■■□□ 2.19
EFR3A-206ENST00000522709 MSH6P52701 1360 aa28.7■■■□□ 2.18
EFR3A-206ENST00000522709 ADGRL2O95490 1459 aa28.7■■■□□ 2.18
EFR3A-206ENST00000522709 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
EFR3A-206ENST00000522709 MYO5BQ9ULV0 1848 aa28.66■■■□□ 2.18
EFR3A-206ENST00000522709 RPRD2Q5VT52 1461 aaKnown RBP28.66■■■□□ 2.18
EFR3A-206ENST00000522709 ZFYVE9O95405 1425 aa28.65■■■□□ 2.18
EFR3A-206ENST00000522709 PHLPP1O60346 1717 aa28.65■■■□□ 2.18
EFR3A-206ENST00000522709 GCC2Q8IWJ2 1684 aa28.64■■■□□ 2.18
EFR3A-206ENST00000522709 PLEKHG1Q9ULL1 1385 aa28.64■■■□□ 2.18
EFR3A-206ENST00000522709 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
EFR3A-206ENST00000522709 PPP1R15AO75807 674 aaPredicted RBP28.64■■■□□ 2.18
EFR3A-206ENST00000522709 SLAIN2Q9P270 581 aa28.64■■■□□ 2.18
EFR3A-206ENST00000522709 RIMS2Q9UQ26 1411 aa28.63■■■□□ 2.17
EFR3A-206ENST00000522709 CHD2O14647 1828 aaKnown RBP28.61■■■□□ 2.17
EFR3A-206ENST00000522709 TMEM131LA2VDJ0 1609 aa28.59■■■□□ 2.17
EFR3A-206ENST00000522709 JCADQ9P266 1359 aa28.58■■■□□ 2.17
EFR3A-206ENST00000522709 CHGAP10645 457 aaKnown RBP28.57■■■□□ 2.16
EFR3A-206ENST00000522709 HDGFP51858 240 aaKnown RBP28.57■■■□□ 2.16
EFR3A-206ENST00000522709 SETD1AO15047 1707 aaKnown RBP28.55■■■□□ 2.16
EFR3A-206ENST00000522709 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
EFR3A-206ENST00000522709 C14orf37Q86TY3 774 aa28.53■■■□□ 2.16
EFR3A-206ENST00000522709 TBX22Q9Y458 520 aa28.53■■■□□ 2.16
EFR3A-206ENST00000522709 COL16A1Q07092 1604 aaPredicted RBP28.52■■■□□ 2.16
EFR3A-206ENST00000522709 UNC13BO14795 1591 aa28.51■■■□□ 2.15
EFR3A-206ENST00000522709 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.5■■■□□ 2.15
EFR3A-206ENST00000522709 ADAMTS13Q76LX8 1427 aa28.49■■■□□ 2.15
EFR3A-206ENST00000522709 E9PCH4 1651 aa28.48■■■□□ 2.15
EFR3A-206ENST00000522709 NCOA3Q9Y6Q9 1424 aa28.48■■■□□ 2.15
EFR3A-206ENST00000522709 LRP6O75581 1613 aa28.46■■■□□ 2.15
EFR3A-206ENST00000522709 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.45■■■□□ 2.14
EFR3A-206ENST00000522709 DIP2AQ14689 1571 aa28.45■■■□□ 2.14
EFR3A-206ENST00000522709 MEX3CQ5U5Q3 659 aaKnown RBP28.43■■■□□ 2.14
EFR3A-206ENST00000522709 ATF3P18847 181 aa28.42■■■□□ 2.14
EFR3A-206ENST00000522709 CADPS2Q86UW7 1296 aa28.42■■■□□ 2.14
EFR3A-206ENST00000522709 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
EFR3A-206ENST00000522709 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
EFR3A-206ENST00000522709 AHDC1Q5TGY3 1603 aaPredicted RBP28.4■■■□□ 2.14
EFR3A-206ENST00000522709 IQGAP3Q86VI3 1631 aa28.4■■■□□ 2.14
EFR3A-206ENST00000522709 PIK3R4Q99570 1358 aa28.4■■■□□ 2.14
EFR3A-206ENST00000522709 TRPM2O94759 1503 aa28.38■■■□□ 2.13
EFR3A-206ENST00000522709 PTPRUQ92729 1446 aa28.37■■■□□ 2.13
EFR3A-206ENST00000522709 AMOTL2Q9Y2J4 779 aa28.37■■■□□ 2.13
EFR3A-206ENST00000522709 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
EFR3A-206ENST00000522709 ZNF772Q68DY9 489 aaPredicted RBP28.35■■■□□ 2.13
EFR3A-206ENST00000522709 ROCK1Q13464 1354 aa28.35■■■□□ 2.13
EFR3A-206ENST00000522709 TRIM52Q96A61 297 aa28.34■■■□□ 2.13
EFR3A-206ENST00000522709 NUP155O75694 1391 aa28.34■■■□□ 2.13
EFR3A-206ENST00000522709 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
EFR3A-206ENST00000522709 NUTM2BA6NNL0 878 aaPredicted RBP28.3■■■□□ 2.12
EFR3A-206ENST00000522709 NUTM2EB1AL46 878 aaPredicted RBP28.3■■■□□ 2.12
EFR3A-206ENST00000522709 ITGAEP38570 1179 aa28.3■■■□□ 2.12
EFR3A-206ENST00000522709 NUTM2AQ8IVF1 878 aaPredicted RBP28.3■■■□□ 2.12
EFR3A-206ENST00000522709 UPF1Q92900 1129 aaKnown RBP eCLIP28.27■■■□□ 2.12
EFR3A-206ENST00000522709 NRXN3Q9Y4C0 1643 aa28.27■■■□□ 2.12
EFR3A-206ENST00000522709 ASXL1Q8IXJ9 1541 aa28.26■■■□□ 2.11
EFR3A-206ENST00000522709 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.11
EFR3A-206ENST00000522709 DCCP43146 1447 aa28.26■■■□□ 2.11
EFR3A-206ENST00000522709 SETBP1Q9Y6X0 1596 aa28.24■■■□□ 2.11
EFR3A-206ENST00000522709 RXRBP28702 533 aa28.23■■■□□ 2.11
EFR3A-206ENST00000522709 ZNF326Q5BKZ1 582 aaKnown RBP28.23■■■□□ 2.11
EFR3A-206ENST00000522709 MST1RQ04912 1400 aa28.22■■■□□ 2.11
EFR3A-206ENST00000522709 SPHKAPQ2M3C7 1700 aa28.22■■■□□ 2.11
EFR3A-206ENST00000522709 METP08581 1390 aa28.2■■■□□ 2.1
EFR3A-206ENST00000522709 NHSL1Q5SYE7 1610 aa28.19■■■□□ 2.1
EFR3A-206ENST00000522709 AFF2P51816 1311 aa28.18■■■□□ 2.1
EFR3A-206ENST00000522709 SETD5Q9C0A6 1442 aa28.18■■■□□ 2.1
EFR3A-206ENST00000522709 DDX17Q92841 729 aaKnown RBP28.16■■■□□ 2.1
EFR3A-206ENST00000522709 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
EFR3A-206ENST00000522709 LRRC59Q96AG4 307 aaKnown RBP28.13■■■□□ 2.09
EFR3A-206ENST00000522709 CDK12Q9NYV4 1490 aaPredicted RBP28.13■■■□□ 2.09
EFR3A-206ENST00000522709 ADGRL3Q9HAR2 1447 aa28.12■■■□□ 2.09
EFR3A-206ENST00000522709 C8orf37Q96NL8 207 aa28.11■■■□□ 2.09
EFR3A-206ENST00000522709 NALCNQ8IZF0 1738 aa28.11■■■□□ 2.09
EFR3A-206ENST00000522709 NEXMIFQ5QGS0 1516 aa28.11■■■□□ 2.09
EFR3A-206ENST00000522709 CLTCL1P53675 1640 aa28.1■■■□□ 2.09
EFR3A-206ENST00000522709 PNPLA6Q8IY17 1366 aa28.09■■■□□ 2.09
EFR3A-206ENST00000522709 RGS12O14924 1447 aa28.05■■■□□ 2.08
EFR3A-206ENST00000522709 QTRT2Q9H974 415 aaKnown RBP28.05■■■□□ 2.08
EFR3A-206ENST00000522709 C1orf167Q5SNV9 1468 aa28.02■■■□□ 2.08
EFR3A-206ENST00000522709 ADAMTS2O95450 1211 aa28.01■■■□□ 2.07
EFR3A-206ENST00000522709 RBM6P78332 1123 aaKnown RBP28.01■■■□□ 2.07
EFR3A-206ENST00000522709 KIF1BO60333 1816 aa28.01■■■□□ 2.07
EFR3A-206ENST00000522709 NGLY1Q96IV0 654 aa27.98■■■□□ 2.07
EFR3A-206ENST00000522709 PTCH1Q13635 1447 aa27.97■■■□□ 2.07
EFR3A-206ENST00000522709 ROBO2Q9HCK4 1378 aa27.97■■■□□ 2.07
EFR3A-206ENST00000522709 ORAI2Q96SN7 254 aa27.96■■■□□ 2.07
EFR3A-206ENST00000522709 LAMC1P11047 1609 aa27.94■■■□□ 2.06
EFR3A-206ENST00000522709 SOS2Q07890 1332 aaPredicted RBP27.92■■■□□ 2.06
EFR3A-206ENST00000522709 VGFO15240 615 aaPredicted RBP27.92■■■□□ 2.06
EFR3A-206ENST00000522709 NAIPQ13075 1403 aa27.92■■■□□ 2.06
EFR3A-206ENST00000522709 USP21Q9UK80 565 aa27.89■■■□□ 2.06
EFR3A-206ENST00000522709 HFM1A2PYH4 1435 aa27.84■■■□□ 2.05
EFR3A-206ENST00000522709 PRAG1Q86YV5 1406 aa27.84■■■□□ 2.05
EFR3A-206ENST00000522709 TRPC5Q9UL62 973 aaPredicted RBP27.84■■■□□ 2.05
EFR3A-206ENST00000522709 RPGRIP1LQ68CZ1 1315 aa27.84■■■□□ 2.05
EFR3A-206ENST00000522709 ATAD2Q6PL18 1390 aa27.84■■■□□ 2.05
EFR3A-206ENST00000522709 RRBP1Q9P2E9 1410 aaKnown RBP27.84■■■□□ 2.05
EFR3A-206ENST00000522709 COL22A1Q8NFW1 1626 aaPredicted RBP27.82■■■□□ 2.04
EFR3A-206ENST00000522709 PPLO60437 1756 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms