RNA–Protein interactions for RNA: ENST00000522309.1

RTL8A-204, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 1 (best)

Gene RTL8A, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-204ENST00000522309 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
RTL8A-204ENST00000522309 NWD1Q149M9 1564 aa26.47■■□□□ 1.83
RTL8A-204ENST00000522309 RGS17Q9UGC6 210 aaPredicted RBP26.47■■□□□ 1.83
RTL8A-204ENST00000522309 GCC2Q8IWJ2 1684 aa26.47■■□□□ 1.83
RTL8A-204ENST00000522309 TMEM131LA2VDJ0 1609 aa26.47■■□□□ 1.83
RTL8A-204ENST00000522309 UNC13BO14795 1591 aa26.46■■□□□ 1.83
RTL8A-204ENST00000522309 CHD2O14647 1828 aaKnown RBP26.45■■□□□ 1.82
RTL8A-204ENST00000522309 NKTRP30414 1462 aaKnown RBP26.44■■□□□ 1.82
RTL8A-204ENST00000522309 BCANQ96GW7 911 aa26.44■■□□□ 1.82
RTL8A-204ENST00000522309 RIMS2Q9UQ26 1411 aa26.43■■□□□ 1.82
RTL8A-204ENST00000522309 ROBO1Q9Y6N7 1651 aa26.43■■□□□ 1.82
RTL8A-204ENST00000522309 PLEKHG1Q9ULL1 1385 aa26.43■■□□□ 1.82
RTL8A-204ENST00000522309 E9PCH4 1651 aa26.42■■□□□ 1.82
RTL8A-204ENST00000522309 ROCK1Q13464 1354 aa26.4■■□□□ 1.82
RTL8A-204ENST00000522309 HDGFP51858 240 aaKnown RBP26.38■■□□□ 1.81
RTL8A-204ENST00000522309 TBX22Q9Y458 520 aa26.37■■□□□ 1.81
RTL8A-204ENST00000522309 PPP1R15AO75807 674 aaPredicted RBP26.36■■□□□ 1.81
RTL8A-204ENST00000522309 IQGAP3Q86VI3 1631 aa26.36■■□□□ 1.81
RTL8A-204ENST00000522309 CHGAP10645 457 aaKnown RBP26.35■■□□□ 1.81
RTL8A-204ENST00000522309 SLAIN2Q9P270 581 aa26.35■■□□□ 1.81
RTL8A-204ENST00000522309 MSH6P52701 1360 aa26.34■■□□□ 1.81
RTL8A-204ENST00000522309 ADAMTS13Q76LX8 1427 aa26.33■■□□□ 1.81
RTL8A-204ENST00000522309 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
RTL8A-204ENST00000522309 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.32■■□□□ 1.8
RTL8A-204ENST00000522309 NUP155O75694 1391 aa26.3■■□□□ 1.8
RTL8A-204ENST00000522309 ITGAEP38570 1179 aa26.28■■□□□ 1.8
RTL8A-204ENST00000522309 POTEAQ6S8J7 498 aa26.28■■□□□ 1.8
RTL8A-204ENST00000522309 PHLPP1O60346 1717 aa26.27■■□□□ 1.8
RTL8A-204ENST00000522309 NCOA3Q9Y6Q9 1424 aa26.26■■□□□ 1.79
RTL8A-204ENST00000522309 PPARGC1BQ86YN6 1023 aaKnown RBP26.26■■□□□ 1.79
RTL8A-204ENST00000522309 DIP2AQ14689 1571 aa26.23■■□□□ 1.79
RTL8A-204ENST00000522309 PIK3R4Q99570 1358 aa26.22■■□□□ 1.79
RTL8A-204ENST00000522309 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.22■■□□□ 1.79
RTL8A-204ENST00000522309 COL16A1Q07092 1604 aaPredicted RBP26.2■■□□□ 1.78
RTL8A-204ENST00000522309 PTPRUQ92729 1446 aa26.2■■□□□ 1.78
RTL8A-204ENST00000522309 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
RTL8A-204ENST00000522309 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
RTL8A-204ENST00000522309 JCADQ9P266 1359 aa26.19■■□□□ 1.78
RTL8A-204ENST00000522309 C14orf37Q86TY3 774 aa26.18■■□□□ 1.78
RTL8A-204ENST00000522309 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
RTL8A-204ENST00000522309 TRPM2O94759 1503 aa26.16■■□□□ 1.78
RTL8A-204ENST00000522309 CADPS2Q86UW7 1296 aa26.16■■□□□ 1.78
RTL8A-204ENST00000522309 NRXN3Q9Y4C0 1643 aa26.16■■□□□ 1.78
RTL8A-204ENST00000522309 ATF3P18847 181 aa26.13■■□□□ 1.77
RTL8A-204ENST00000522309 SETBP1Q9Y6X0 1596 aa26.11■■□□□ 1.77
RTL8A-204ENST00000522309 AHDC1Q5TGY3 1603 aaPredicted RBP26.1■■□□□ 1.77
RTL8A-204ENST00000522309 XRN1Q8IZH2 1706 aaKnown RBP26.1■■□□□ 1.77
RTL8A-204ENST00000522309 LRP6O75581 1613 aa26.08■■□□□ 1.77
RTL8A-204ENST00000522309 METP08581 1390 aa26.07■■□□□ 1.76
RTL8A-204ENST00000522309 ZNF326Q5BKZ1 582 aaKnown RBP26.06■■□□□ 1.76
RTL8A-204ENST00000522309 BRINP3Q76B58 766 aa26.06■■□□□ 1.76
RTL8A-204ENST00000522309 SPATA31A6Q5VVP1 1343 aa26.06■■□□□ 1.76
RTL8A-204ENST00000522309 CLTCL1P53675 1640 aa26.06■■□□□ 1.76
RTL8A-204ENST00000522309 SHPRHQ149N8 1683 aa26.04■■□□□ 1.76
RTL8A-204ENST00000522309 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
RTL8A-204ENST00000522309 DCCP43146 1447 aa26.03■■□□□ 1.76
RTL8A-204ENST00000522309 NAIPQ13075 1403 aa26.03■■□□□ 1.76
RTL8A-204ENST00000522309 NEXMIFQ5QGS0 1516 aa26.03■■□□□ 1.76
RTL8A-204ENST00000522309 SETD1AO15047 1707 aaKnown RBP26.02■■□□□ 1.76
RTL8A-204ENST00000522309 MST1RQ04912 1400 aa26■■□□□ 1.75
RTL8A-204ENST00000522309 KIF1BO60333 1816 aa26■■□□□ 1.75
RTL8A-204ENST00000522309 ASXL1Q8IXJ9 1541 aa25.97■■□□□ 1.75
RTL8A-204ENST00000522309 MEX3CQ5U5Q3 659 aaKnown RBP25.96■■□□□ 1.75
RTL8A-204ENST00000522309 NHSL1Q5SYE7 1610 aa25.95■■□□□ 1.74
RTL8A-204ENST00000522309 ZNF772Q68DY9 489 aaPredicted RBP25.93■■□□□ 1.74
RTL8A-204ENST00000522309 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
RTL8A-204ENST00000522309 ADGRL3Q9HAR2 1447 aa25.93■■□□□ 1.74
RTL8A-204ENST00000522309 NALCNQ8IZF0 1738 aa25.92■■□□□ 1.74
RTL8A-204ENST00000522309 NUTM2BA6NNL0 878 aaPredicted RBP25.91■■□□□ 1.74
RTL8A-204ENST00000522309 NUTM2EB1AL46 878 aaPredicted RBP25.91■■□□□ 1.74
RTL8A-204ENST00000522309 NUTM2AQ8IVF1 878 aaPredicted RBP25.91■■□□□ 1.74
RTL8A-204ENST00000522309 DDX17Q92841 729 aaKnown RBP25.91■■□□□ 1.74
RTL8A-204ENST00000522309 TRIM52Q96A61 297 aa25.89■■□□□ 1.74
RTL8A-204ENST00000522309 HFM1A2PYH4 1435 aa25.88■■□□□ 1.73
RTL8A-204ENST00000522309 VGFO15240 615 aaPredicted RBP25.87■■□□□ 1.73
RTL8A-204ENST00000522309 LRRC59Q96AG4 307 aaKnown RBP25.87■■□□□ 1.73
RTL8A-204ENST00000522309 ROBO2Q9HCK4 1378 aa25.84■■□□□ 1.73
RTL8A-204ENST00000522309 C1orf167Q5SNV9 1468 aa25.84■■□□□ 1.73
RTL8A-204ENST00000522309 RPGRIP1LQ68CZ1 1315 aa25.84■■□□□ 1.73
RTL8A-204ENST00000522309 PTCH1Q13635 1447 aa25.83■■□□□ 1.73
RTL8A-204ENST00000522309 SLC4A1APQ9BWU0 796 aaKnown RBP25.83■■□□□ 1.73
RTL8A-204ENST00000522309 PPLO60437 1756 aa25.82■■□□□ 1.72
RTL8A-204ENST00000522309 RXRBP28702 533 aa25.82■■□□□ 1.72
RTL8A-204ENST00000522309 AFF2P51816 1311 aa25.82■■□□□ 1.72
RTL8A-204ENST00000522309 PNPLA6Q8IY17 1366 aa25.82■■□□□ 1.72
RTL8A-204ENST00000522309 UPF1Q92900 1129 aaKnown RBP eCLIP25.81■■□□□ 1.72
RTL8A-204ENST00000522309 PRAG1Q86YV5 1406 aa25.8■■□□□ 1.72
RTL8A-204ENST00000522309 LAMC1P11047 1609 aa25.79■■□□□ 1.72
RTL8A-204ENST00000522309 ORAI2Q96SN7 254 aa25.79■■□□□ 1.72
RTL8A-204ENST00000522309 FOXD1Q16676 465 aa25.78■■□□□ 1.72
RTL8A-204ENST00000522309 CDK12Q9NYV4 1490 aaPredicted RBP25.76■■□□□ 1.71
RTL8A-204ENST00000522309 SOS2Q07890 1332 aaPredicted RBP25.75■■□□□ 1.71
RTL8A-204ENST00000522309 C8orf37Q96NL8 207 aa25.75■■□□□ 1.71
RTL8A-204ENST00000522309 QTRT2Q9H974 415 aaKnown RBP25.72■■□□□ 1.71
RTL8A-204ENST00000522309 ADGRF5Q8IZF2 1346 aa25.71■■□□□ 1.71
RTL8A-204ENST00000522309 ADAMTS2O95450 1211 aa25.69■■□□□ 1.7
RTL8A-204ENST00000522309 RBM6P78332 1123 aaKnown RBP25.67■■□□□ 1.7
RTL8A-204ENST00000522309 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
RTL8A-204ENST00000522309 RGL3Q3MIN7 710 aa25.66■■□□□ 1.7
RTL8A-204ENST00000522309 NGLY1Q96IV0 654 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms