RNA–Protein interactions for RNA: ENST00000522178.1

VDAC3-210, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-210ENST00000522178 DDX11L8A8MPP1 907 aa12.88□□□□□ -0.35
VDAC3-210ENST00000522178 HS3ST6Q96QI5 342 aa12.88□□□□□ -0.35
VDAC3-210ENST00000522178 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
VDAC3-210ENST00000522178 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
VDAC3-210ENST00000522178 TK2O00142 265 aa12.86□□□□□ -0.35
VDAC3-210ENST00000522178 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
VDAC3-210ENST00000522178 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
VDAC3-210ENST00000522178 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
VDAC3-210ENST00000522178 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
VDAC3-210ENST00000522178 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
VDAC3-210ENST00000522178 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
VDAC3-210ENST00000522178 SPIRE2Q8WWL2 714 aa12.83□□□□□ -0.36
VDAC3-210ENST00000522178 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
VDAC3-210ENST00000522178 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
VDAC3-210ENST00000522178 CLK2P49760 499 aaKnown RBP12.82□□□□□ -0.36
VDAC3-210ENST00000522178 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
VDAC3-210ENST00000522178 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
VDAC3-210ENST00000522178 FLIIQ13045 1269 aa12.81□□□□□ -0.36
VDAC3-210ENST00000522178 SWT1Q5T5J6 900 aaKnown RBP12.81□□□□□ -0.36
VDAC3-210ENST00000522178 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
VDAC3-210ENST00000522178 RDH13Q8NBN7 331 aa12.81□□□□□ -0.36
VDAC3-210ENST00000522178 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
VDAC3-210ENST00000522178 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
VDAC3-210ENST00000522178 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
VDAC3-210ENST00000522178 GJA5P36382 358 aa12.79□□□□□ -0.36
VDAC3-210ENST00000522178 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
VDAC3-210ENST00000522178 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
VDAC3-210ENST00000522178 SLF2Q8IX21 1173 aa12.78□□□□□ -0.36
VDAC3-210ENST00000522178 PROCA1Q8NCQ7 364 aaPredicted RBP12.78□□□□□ -0.36
VDAC3-210ENST00000522178 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
VDAC3-210ENST00000522178 USP46P62068 366 aa12.77□□□□□ -0.37
VDAC3-210ENST00000522178 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
VDAC3-210ENST00000522178 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.37
VDAC3-210ENST00000522178 SPTLC1O15269 473 aa12.76□□□□□ -0.37
VDAC3-210ENST00000522178 KDM4AO75164 1064 aa12.76□□□□□ -0.37
VDAC3-210ENST00000522178 GCGRP47871 477 aa12.76□□□□□ -0.37
VDAC3-210ENST00000522178 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
VDAC3-210ENST00000522178 SLC10A3P09131 477 aa12.74□□□□□ -0.37
VDAC3-210ENST00000522178 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
VDAC3-210ENST00000522178 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
VDAC3-210ENST00000522178 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
VDAC3-210ENST00000522178 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
VDAC3-210ENST00000522178 LIMD1Q9UGP4 676 aa12.73□□□□□ -0.37
VDAC3-210ENST00000522178 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
VDAC3-210ENST00000522178 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
VDAC3-210ENST00000522178 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
VDAC3-210ENST00000522178 HRO43593 1189 aa12.71□□□□□ -0.37
VDAC3-210ENST00000522178 ZMYND15Q9H091 742 aa12.71□□□□□ -0.37
VDAC3-210ENST00000522178 HOXA2O43364 376 aa12.68□□□□□ -0.38
VDAC3-210ENST00000522178 NDUFV2P19404 249 aa12.67□□□□□ -0.38
VDAC3-210ENST00000522178 RFC5P40937 340 aa12.67□□□□□ -0.38
VDAC3-210ENST00000522178 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
VDAC3-210ENST00000522178 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
VDAC3-210ENST00000522178 TMEM259Q4ZIN3 620 aa12.66□□□□□ -0.38
VDAC3-210ENST00000522178 PRPF38BQ5VTL8 546 aaKnown RBP12.66□□□□□ -0.38
VDAC3-210ENST00000522178 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
VDAC3-210ENST00000522178 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
VDAC3-210ENST00000522178 CFHP08603 1231 aa12.65□□□□□ -0.38
VDAC3-210ENST00000522178 MCM6Q14566 821 aa12.65□□□□□ -0.38
VDAC3-210ENST00000522178 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
VDAC3-210ENST00000522178 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
VDAC3-210ENST00000522178 LILRB3O75022 631 aa12.64□□□□□ -0.39
VDAC3-210ENST00000522178 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
VDAC3-210ENST00000522178 RNF40O75150 1001 aa12.63□□□□□ -0.39
VDAC3-210ENST00000522178 FDX1P10109 184 aa12.63□□□□□ -0.39
VDAC3-210ENST00000522178 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
VDAC3-210ENST00000522178 SPDYE5A6NIY4 337 aa12.62□□□□□ -0.39
VDAC3-210ENST00000522178 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
VDAC3-210ENST00000522178 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
VDAC3-210ENST00000522178 PRR14Q9BWN1 585 aa12.61□□□□□ -0.39
VDAC3-210ENST00000522178 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
VDAC3-210ENST00000522178 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
VDAC3-210ENST00000522178 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
VDAC3-210ENST00000522178 FUT2Q10981 343 aa12.6□□□□□ -0.39
VDAC3-210ENST00000522178 QPCTQ16769 361 aa12.6□□□□□ -0.39
VDAC3-210ENST00000522178 NUTM2BA6NNL0 878 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-210ENST00000522178 NUTM2EB1AL46 878 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-210ENST00000522178 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
VDAC3-210ENST00000522178 NUTM2DQ5VT03 806 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-210ENST00000522178 FBXO31Q5XUX0 539 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-210ENST00000522178 NUTM2AQ8IVF1 878 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-210ENST00000522178 SOWAHBA6NEL2 793 aa12.58□□□□□ -0.4
VDAC3-210ENST00000522178 A6NJR5 290 aa12.57□□□□□ -0.4
VDAC3-210ENST00000522178 ACTN4O43707 911 aaKnown RBP12.57□□□□□ -0.4
VDAC3-210ENST00000522178 HRCP23327 699 aa12.57□□□□□ -0.4
VDAC3-210ENST00000522178 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
VDAC3-210ENST00000522178 SOCS7O14512 581 aa12.56□□□□□ -0.4
VDAC3-210ENST00000522178 PPP4CP60510 307 aa12.55□□□□□ -0.4
VDAC3-210ENST00000522178 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
VDAC3-210ENST00000522178 MTMR2Q13614 643 aa12.55□□□□□ -0.4
VDAC3-210ENST00000522178 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
VDAC3-210ENST00000522178 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
VDAC3-210ENST00000522178 WNT2BQ93097 391 aa12.54□□□□□ -0.4
VDAC3-210ENST00000522178 HLA-CQ95604 372 aa12.54□□□□□ -0.4
VDAC3-210ENST00000522178 TSR3Q9UJK0 312 aaKnown RBP12.54□□□□□ -0.4
VDAC3-210ENST00000522178 SUPT5HO00267 1087 aaKnown RBP12.53□□□□□ -0.4
VDAC3-210ENST00000522178 KRTAP3-3Q9BYR6 98 aa12.53□□□□□ -0.4
VDAC3-210ENST00000522178 KRTAP3-2Q9BYR7 98 aa12.53□□□□□ -0.4
VDAC3-210ENST00000522178 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
VDAC3-210ENST00000522178 APBB1O00213 710 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms