RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 SEPT9Q9UHD8 586 aaPredicted RBP5.58□□□□□ -1.52
NPM1-209ENST00000521710 FAM205CA6NFA0 338 aa5.57□□□□□ -1.52
NPM1-209ENST00000521710 DDX11L8A8MPP1 907 aa5.57□□□□□ -1.52
NPM1-209ENST00000521710 ARHGAP33O14559 1287 aa5.57□□□□□ -1.52
NPM1-209ENST00000521710 DNAJB2P25686 324 aa5.57□□□□□ -1.52
NPM1-209ENST00000521710 SKIV2LQ15477 1246 aaKnown RBP5.57□□□□□ -1.52
NPM1-209ENST00000521710 SPIRE2Q8WWL2 714 aa5.57□□□□□ -1.52
NPM1-209ENST00000521710 PCMTD1Q96MG8 357 aaPredicted RBP5.57□□□□□ -1.52
NPM1-209ENST00000521710 SUPT5HO00267 1087 aaKnown RBP5.56□□□□□ -1.52
NPM1-209ENST00000521710 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.56□□□□□ -1.52
NPM1-209ENST00000521710 LIMD1Q9UGP4 676 aa5.56□□□□□ -1.52
NPM1-209ENST00000521710 VPS9D1Q9Y2B5 631 aa5.56□□□□□ -1.52
NPM1-209ENST00000521710 ERICH6Q7L0X2 663 aa5.55□□□□□ -1.52
NPM1-209ENST00000521710 MOXD2PA6NHM9 499 aa5.54□□□□□ -1.52
NPM1-209ENST00000521710 SLC10A3P09131 477 aa5.54□□□□□ -1.52
NPM1-209ENST00000521710 CLK2P49760 499 aaKnown RBP5.54□□□□□ -1.52
NPM1-209ENST00000521710 SWT1Q5T5J6 900 aaKnown RBP5.54□□□□□ -1.52
NPM1-209ENST00000521710 ZNF687Q8N1G0 1237 aa5.54□□□□□ -1.52
NPM1-209ENST00000521710 SLC4A5Q9BY07 1137 aa5.54□□□□□ -1.52
NPM1-209ENST00000521710 RSPH6AQ9H0K4 717 aa5.54□□□□□ -1.52
NPM1-209ENST00000521710 RABGEF1Q9UJ41 708 aa5.54□□□□□ -1.52
NPM1-209ENST00000521710 NDUFV2P19404 249 aa5.53□□□□□ -1.52
NPM1-209ENST00000521710 SULF1Q8IWU6 871 aa5.53□□□□□ -1.52
NPM1-209ENST00000521710 HLA-CQ95604 372 aa5.53□□□□□ -1.52
NPM1-209ENST00000521710 KCNH8Q96L42 1107 aa5.53□□□□□ -1.52
NPM1-209ENST00000521710 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
NPM1-209ENST00000521710 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
NPM1-209ENST00000521710 BHMG1C9JSJ3 638 aaPredicted RBP5.52□□□□□ -1.53
NPM1-209ENST00000521710 PBX2P40425 430 aa5.52□□□□□ -1.53
NPM1-209ENST00000521710 MCM6Q14566 821 aa5.52□□□□□ -1.53
NPM1-209ENST00000521710 RIC3Q7Z5B4 369 aa5.52□□□□□ -1.53
NPM1-209ENST00000521710 RDH13Q8NBN7 331 aa5.52□□□□□ -1.53
NPM1-209ENST00000521710 ZMYND15Q9H091 742 aa5.52□□□□□ -1.53
NPM1-209ENST00000521710 GUCA2AQ02747 115 aa5.51□□□□□ -1.53
NPM1-209ENST00000521710 QPCTQ16769 361 aa5.51□□□□□ -1.53
NPM1-209ENST00000521710 CSPP1Q1MSJ5 1256 aa5.51□□□□□ -1.53
NPM1-209ENST00000521710 RSBN1LQ6PCB5 846 aaPredicted RBP5.51□□□□□ -1.53
NPM1-209ENST00000521710 SAMD7Q7Z3H4 446 aa5.51□□□□□ -1.53
NPM1-209ENST00000521710 PCDHB15Q9Y5E8 787 aa5.51□□□□□ -1.53
NPM1-209ENST00000521710 SPTLC1O15269 473 aa5.5□□□□□ -1.53
NPM1-209ENST00000521710 RFC5P40937 340 aa5.5□□□□□ -1.53
NPM1-209ENST00000521710 GCGRP47871 477 aa5.5□□□□□ -1.53
NPM1-209ENST00000521710 FAM98CQ17RN3 349 aaKnown RBP5.5□□□□□ -1.53
NPM1-209ENST00000521710 CLUAP1Q96AJ1 413 aa5.5□□□□□ -1.53
NPM1-209ENST00000521710 POM121Q96HA1 1249 aa5.5□□□□□ -1.53
NPM1-209ENST00000521710 C1orf115Q9H7X2 142 aa5.5□□□□□ -1.53
NPM1-209ENST00000521710 ATP1B4Q9UN42 357 aaPredicted RBP5.5□□□□□ -1.53
NPM1-209ENST00000521710 HOXA2O43364 376 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 KDM4AO75164 1064 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 FLIIQ13045 1269 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 NUTM1Q86Y26 1132 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 CABLES1Q8TDN4 633 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 SNRKQ9NRH2 765 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 PCDHGC3Q9UN70 934 aa5.49□□□□□ -1.53
NPM1-209ENST00000521710 LSM11P83369 360 aaKnown RBP eCLIP5.48□□□□□ -1.53
NPM1-209ENST00000521710 RTL5Q5HYW3 569 aaPredicted RBP5.48□□□□□ -1.53
NPM1-209ENST00000521710 ADGRD1Q6QNK2 874 aa5.48□□□□□ -1.53
NPM1-209ENST00000521710 ZFRQ96KR1 1074 aaKnown RBP5.48□□□□□ -1.53
NPM1-209ENST00000521710 HRO43593 1189 aa5.47□□□□□ -1.53
NPM1-209ENST00000521710 LILRB3O75022 631 aa5.47□□□□□ -1.53
NPM1-209ENST00000521710 DIXDC1Q155Q3 683 aa5.47□□□□□ -1.53
NPM1-209ENST00000521710 PPP2R2DQ66LE6 453 aa5.47□□□□□ -1.53
NPM1-209ENST00000521710 SPNS2Q8IVW8 549 aa5.47□□□□□ -1.53
NPM1-209ENST00000521710 ARID3CA6NKF2 412 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 TK2O00142 265 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 RNF40O75150 1001 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 CFHP08603 1231 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 FUT2Q10981 343 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 TUSC1Q2TAM9 212 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 LAPTM4BQ86VI4 370 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 NBPF3Q9H094 633 aa5.46□□□□□ -1.54
NPM1-209ENST00000521710 FDX1P10109 184 aa5.45□□□□□ -1.54
NPM1-209ENST00000521710 HRCP23327 699 aa5.45□□□□□ -1.54
NPM1-209ENST00000521710 GJA5P36382 358 aa5.45□□□□□ -1.54
NPM1-209ENST00000521710 MTMR14Q8NCE2 650 aa5.45□□□□□ -1.54
NPM1-209ENST00000521710 UBTFP17480 764 aaKnown RBP5.44□□□□□ -1.54
NPM1-209ENST00000521710 USP46P62068 366 aa5.44□□□□□ -1.54
NPM1-209ENST00000521710 ANKRD13DQ6ZTN6 518 aa5.44□□□□□ -1.54
NPM1-209ENST00000521710 SLF2Q8IX21 1173 aa5.44□□□□□ -1.54
NPM1-209ENST00000521710 MRPL50Q8N5N7 158 aaKnown RBP5.44□□□□□ -1.54
NPM1-209ENST00000521710 SYMPKQ92797 1274 aaKnown RBP5.44□□□□□ -1.54
NPM1-209ENST00000521710 SPDYE5A6NIY4 337 aa5.43□□□□□ -1.54
NPM1-209ENST00000521710 A6NJR5 290 aa5.43□□□□□ -1.54
NPM1-209ENST00000521710 BCAMP50895 628 aa5.43□□□□□ -1.54
NPM1-209ENST00000521710 PUS10Q3MIT2 529 aaKnown RBP5.43□□□□□ -1.54
NPM1-209ENST00000521710 FNBP4Q8N3X1 1017 aaPredicted RBP5.43□□□□□ -1.54
NPM1-209ENST00000521710 COG6Q9Y2V7 657 aa5.43□□□□□ -1.54
NPM1-209ENST00000521710 NUTM2BA6NNL0 878 aaPredicted RBP5.42□□□□□ -1.54
NPM1-209ENST00000521710 NUTM2EB1AL46 878 aaPredicted RBP5.42□□□□□ -1.54
NPM1-209ENST00000521710 CFAP99D6REC4 459 aa5.42□□□□□ -1.54
NPM1-209ENST00000521710 TRAK2O60296 914 aa5.42□□□□□ -1.54
NPM1-209ENST00000521710 AP1G2O75843 785 aa5.42□□□□□ -1.54
NPM1-209ENST00000521710 HDGFP51858 240 aaKnown RBP5.42□□□□□ -1.54
NPM1-209ENST00000521710 MMRN1Q13201 1228 aa5.42□□□□□ -1.54
NPM1-209ENST00000521710 RSPH4AQ5TD94 716 aa5.42□□□□□ -1.54
NPM1-209ENST00000521710 NUTM2DQ5VT03 806 aaPredicted RBP5.42□□□□□ -1.54
NPM1-209ENST00000521710 PRPF38BQ5VTL8 546 aaKnown RBP5.42□□□□□ -1.54
NPM1-209ENST00000521710 NUTM2AQ8IVF1 878 aaPredicted RBP5.42□□□□□ -1.54
NPM1-209ENST00000521710 BANK1Q8NDB2 785 aa5.42□□□□□ -1.54
NPM1-209ENST00000521710 LRCH3Q96II8 777 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms