RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MYO5BQ9ULV0 1848 aa30.1■■■□□ 2.41
PABPC1-215ENST00000520804 ZFYVE9O95405 1425 aa30.09■■■□□ 2.41
PABPC1-215ENST00000520804 MED1Q15648 1581 aaPredicted RBP30.09■■■□□ 2.41
PABPC1-215ENST00000520804 NUP155O75694 1391 aa30.05■■■□□ 2.4
PABPC1-215ENST00000520804 TMEM94Q12767 1356 aa30.05■■■□□ 2.4
PABPC1-215ENST00000520804 RIMS2Q9UQ26 1411 aa30.05■■■□□ 2.4
PABPC1-215ENST00000520804 HDGFP51858 240 aaKnown RBP30.04■■■□□ 2.4
PABPC1-215ENST00000520804 BCANQ96GW7 911 aa30.04■■■□□ 2.4
PABPC1-215ENST00000520804 PLEKHG1Q9ULL1 1385 aa30.03■■■□□ 2.4
PABPC1-215ENST00000520804 NWD1Q149M9 1564 aa30.03■■■□□ 2.4
PABPC1-215ENST00000520804 NKTRP30414 1462 aaKnown RBP30.01■■■□□ 2.4
PABPC1-215ENST00000520804 SENP3Q9H4L4 574 aaPredicted RBP30.01■■■□□ 2.39
PABPC1-215ENST00000520804 PPP1R15AO75807 674 aaPredicted RBP30■■■□□ 2.39
PABPC1-215ENST00000520804 CHGAP10645 457 aaKnown RBP30■■■□□ 2.39
PABPC1-215ENST00000520804 PROSER2Q86WR7 435 aaPredicted RBP30■■■□□ 2.39
PABPC1-215ENST00000520804 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.96■■■□□ 2.39
PABPC1-215ENST00000520804 RBM33Q96EV2 1170 aaKnown RBP29.96■■■□□ 2.39
PABPC1-215ENST00000520804 FAM135BQ49AJ0 1406 aa29.95■■■□□ 2.38
PABPC1-215ENST00000520804 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
PABPC1-215ENST00000520804 CHD2O14647 1828 aaKnown RBP29.94■■■□□ 2.38
PABPC1-215ENST00000520804 TBX22Q9Y458 520 aa29.92■■■□□ 2.38
PABPC1-215ENST00000520804 NUTM2DQ5VT03 806 aaPredicted RBP29.89■■■□□ 2.38
PABPC1-215ENST00000520804 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
PABPC1-215ENST00000520804 MSH6P52701 1360 aa29.88■■■□□ 2.37
PABPC1-215ENST00000520804 SPHKAPQ2M3C7 1700 aa29.87■■■□□ 2.37
PABPC1-215ENST00000520804 DIP2AQ14689 1571 aa29.86■■■□□ 2.37
PABPC1-215ENST00000520804 PHF23Q9BUL5 403 aaPredicted RBP29.86■■■□□ 2.37
PABPC1-215ENST00000520804 ROBO1Q9Y6N7 1651 aa29.85■■■□□ 2.37
PABPC1-215ENST00000520804 NAIPQ13075 1403 aa29.82■■■□□ 2.36
PABPC1-215ENST00000520804 PIK3R4Q99570 1358 aa29.82■■■□□ 2.36
PABPC1-215ENST00000520804 NCOA3Q9Y6Q9 1424 aa29.8■■■□□ 2.36
PABPC1-215ENST00000520804 SLAIN2Q9P270 581 aa29.78■■■□□ 2.36
PABPC1-215ENST00000520804 TRPM2O94759 1503 aa29.77■■■□□ 2.36
PABPC1-215ENST00000520804 NRXN3Q9Y4C0 1643 aa29.73■■■□□ 2.35
PABPC1-215ENST00000520804 CLTCL1P53675 1640 aa29.72■■■□□ 2.35
PABPC1-215ENST00000520804 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
PABPC1-215ENST00000520804 SETBP1Q9Y6X0 1596 aa29.72■■■□□ 2.35
PABPC1-215ENST00000520804 PTPRUQ92729 1446 aa29.71■■■□□ 2.35
PABPC1-215ENST00000520804 C14orf37Q86TY3 774 aa29.71■■■□□ 2.35
PABPC1-215ENST00000520804 AMOTL2Q9Y2J4 779 aa29.71■■■□□ 2.35
PABPC1-215ENST00000520804 HFM1A2PYH4 1435 aa29.71■■■□□ 2.35
PABPC1-215ENST00000520804 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.68■■■□□ 2.34
PABPC1-215ENST00000520804 C19orf44Q9H6X5 657 aa29.68■■■□□ 2.34
PABPC1-215ENST00000520804 PHLPP1O60346 1717 aa29.67■■■□□ 2.34
PABPC1-215ENST00000520804 CADPS2Q86UW7 1296 aa29.66■■■□□ 2.34
PABPC1-215ENST00000520804 RGS17Q9UGC6 210 aaPredicted RBP29.66■■■□□ 2.34
PABPC1-215ENST00000520804 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
PABPC1-215ENST00000520804 TRIM52Q96A61 297 aa29.65■■■□□ 2.34
PABPC1-215ENST00000520804 KIF1BO60333 1816 aa29.64■■■□□ 2.34
PABPC1-215ENST00000520804 XRN1Q8IZH2 1706 aaKnown RBP29.64■■■□□ 2.34
PABPC1-215ENST00000520804 ATF3P18847 181 aa29.63■■■□□ 2.33
PABPC1-215ENST00000520804 METP08581 1390 aa29.61■■■□□ 2.33
PABPC1-215ENST00000520804 JCADQ9P266 1359 aa29.59■■■□□ 2.33
PABPC1-215ENST00000520804 COL16A1Q07092 1604 aaPredicted RBP29.59■■■□□ 2.33
PABPC1-215ENST00000520804 SLC4A1APQ9BWU0 796 aaKnown RBP29.57■■■□□ 2.32
PABPC1-215ENST00000520804 DCCP43146 1447 aa29.56■■■□□ 2.32
PABPC1-215ENST00000520804 AHDC1Q5TGY3 1603 aaPredicted RBP29.54■■■□□ 2.32
PABPC1-215ENST00000520804 VGFO15240 615 aaPredicted RBP29.5■■■□□ 2.31
PABPC1-215ENST00000520804 BRINP3Q76B58 766 aa29.49■■■□□ 2.31
PABPC1-215ENST00000520804 RPGRIP1LQ68CZ1 1315 aa29.48■■■□□ 2.31
PABPC1-215ENST00000520804 POTEAQ6S8J7 498 aa29.48■■■□□ 2.31
PABPC1-215ENST00000520804 MST1RQ04912 1400 aa29.46■■■□□ 2.31
PABPC1-215ENST00000520804 SETD1AO15047 1707 aaKnown RBP29.46■■■□□ 2.31
PABPC1-215ENST00000520804 SPATA31A6Q5VVP1 1343 aa29.45■■■□□ 2.31
PABPC1-215ENST00000520804 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.31
PABPC1-215ENST00000520804 ASXL1Q8IXJ9 1541 aa29.44■■■□□ 2.3
PABPC1-215ENST00000520804 SHPRHQ149N8 1683 aa29.44■■■□□ 2.3
PABPC1-215ENST00000520804 FOXD1Q16676 465 aa29.43■■■□□ 2.3
PABPC1-215ENST00000520804 PPLO60437 1756 aa29.43■■■□□ 2.3
PABPC1-215ENST00000520804 NALCNQ8IZF0 1738 aa29.42■■■□□ 2.3
PABPC1-215ENST00000520804 LRP6O75581 1613 aa29.42■■■□□ 2.3
PABPC1-215ENST00000520804 PTCH1Q13635 1447 aa29.41■■■□□ 2.3
PABPC1-215ENST00000520804 NHSL1Q5SYE7 1610 aa29.38■■■□□ 2.29
PABPC1-215ENST00000520804 PRAG1Q86YV5 1406 aa29.37■■■□□ 2.29
PABPC1-215ENST00000520804 MPHOSPH9Q99550 1183 aa29.37■■■□□ 2.29
PABPC1-215ENST00000520804 ROBO2Q9HCK4 1378 aa29.37■■■□□ 2.29
PABPC1-215ENST00000520804 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
PABPC1-215ENST00000520804 SETD5Q9C0A6 1442 aa29.35■■■□□ 2.29
PABPC1-215ENST00000520804 MEX3CQ5U5Q3 659 aaKnown RBP29.33■■■□□ 2.29
PABPC1-215ENST00000520804 SPATA31E1Q6ZUB1 1445 aa29.32■■■□□ 2.28
PABPC1-215ENST00000520804 C1orf167Q5SNV9 1468 aa29.3■■■□□ 2.28
PABPC1-215ENST00000520804 ADGRF5Q8IZF2 1346 aa29.29■■■□□ 2.28
PABPC1-215ENST00000520804 RGL3Q3MIN7 710 aa29.28■■■□□ 2.28
PABPC1-215ENST00000520804 DDX17Q92841 729 aaKnown RBP29.28■■■□□ 2.28
PABPC1-215ENST00000520804 LRRC59Q96AG4 307 aaKnown RBP29.28■■■□□ 2.28
PABPC1-215ENST00000520804 ZNF772Q68DY9 489 aaPredicted RBP29.27■■■□□ 2.28
PABPC1-215ENST00000520804 IFT172Q9UG01 1749 aa29.27■■■□□ 2.28
PABPC1-215ENST00000520804 ACIN1Q9UKV3 1341 aaKnown RBP29.26■■■□□ 2.27
PABPC1-215ENST00000520804 NUTM2BA6NNL0 878 aaPredicted RBP29.26■■■□□ 2.27
PABPC1-215ENST00000520804 NUTM2EB1AL46 878 aaPredicted RBP29.26■■■□□ 2.27
PABPC1-215ENST00000520804 NUTM2AQ8IVF1 878 aaPredicted RBP29.26■■■□□ 2.27
PABPC1-215ENST00000520804 ANKRD30BQ9BXX2 1392 aa29.26■■■□□ 2.27
PABPC1-215ENST00000520804 LAMC1P11047 1609 aa29.23■■■□□ 2.27
PABPC1-215ENST00000520804 PNPLA6Q8IY17 1366 aa29.21■■■□□ 2.27
PABPC1-215ENST00000520804 ORAI2Q96SN7 254 aa29.2■■■□□ 2.26
PABPC1-215ENST00000520804 TECPR2O15040 1411 aa29.18■■■□□ 2.26
PABPC1-215ENST00000520804 PIK3C2GO75747 1445 aa29.18■■■□□ 2.26
PABPC1-215ENST00000520804 CDC42BPGQ6DT37 1551 aa29.17■■■□□ 2.26
PABPC1-215ENST00000520804 LRPPRCP42704 1394 aaKnown RBP29.16■■■□□ 2.26
PABPC1-215ENST00000520804 SOS2Q07890 1332 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms