RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 CD46P15529 392 aa9.68□□□□□ -0.86
CTNNA1-222ENST00000520400 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-222ENST00000520400 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
CTNNA1-222ENST00000520400 SLC10A3P09131 477 aa9.66□□□□□ -0.86
CTNNA1-222ENST00000520400 SWT1Q5T5J6 900 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-222ENST00000520400 KCNH8Q96L42 1107 aa9.66□□□□□ -0.86
CTNNA1-222ENST00000520400 LSM11P83369 360 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTNNA1-222ENST00000520400 PROCA1Q8NCQ7 364 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-222ENST00000520400 HRO43593 1189 aa9.64□□□□□ -0.87
CTNNA1-222ENST00000520400 SH3D19Q5HYK7 790 aa9.64□□□□□ -0.87
CTNNA1-222ENST00000520400 MYSM1Q5VVJ2 828 aa9.64□□□□□ -0.87
CTNNA1-222ENST00000520400 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
CTNNA1-222ENST00000520400 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
CTNNA1-222ENST00000520400 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
CTNNA1-222ENST00000520400 TBC1D2Q9BYX2 928 aa9.63□□□□□ -0.87
CTNNA1-222ENST00000520400 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-222ENST00000520400 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
CTNNA1-222ENST00000520400 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
CTNNA1-222ENST00000520400 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
CTNNA1-222ENST00000520400 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
CTNNA1-222ENST00000520400 TK2O00142 265 aa9.61□□□□□ -0.87
CTNNA1-222ENST00000520400 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
CTNNA1-222ENST00000520400 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-222ENST00000520400 HLA-CQ95604 372 aa9.59□□□□□ -0.87
CTNNA1-222ENST00000520400 MOXD2PA6NHM9 499 aa9.58□□□□□ -0.88
CTNNA1-222ENST00000520400 ZFRQ96KR1 1074 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-222ENST00000520400 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTNNA1-222ENST00000520400 NDUFV2P19404 249 aa9.57□□□□□ -0.88
CTNNA1-222ENST00000520400 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
CTNNA1-222ENST00000520400 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
CTNNA1-222ENST00000520400 GCGRP47871 477 aa9.56□□□□□ -0.88
CTNNA1-222ENST00000520400 LAPTM4BQ86VI4 370 aa9.56□□□□□ -0.88
CTNNA1-222ENST00000520400 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
CTNNA1-222ENST00000520400 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
CTNNA1-222ENST00000520400 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-222ENST00000520400 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
CTNNA1-222ENST00000520400 CLK2P49760 499 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-222ENST00000520400 NBPF3Q9H094 633 aa9.54□□□□□ -0.88
CTNNA1-222ENST00000520400 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
CTNNA1-222ENST00000520400 RSBN1LQ6PCB5 846 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-222ENST00000520400 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
CTNNA1-222ENST00000520400 MRPL50Q8N5N7 158 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-222ENST00000520400 SPTLC1O15269 473 aa9.52□□□□□ -0.89
CTNNA1-222ENST00000520400 QPCTQ16769 361 aa9.52□□□□□ -0.89
CTNNA1-222ENST00000520400 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
CTNNA1-222ENST00000520400 HOXA2O43364 376 aa9.51□□□□□ -0.89
CTNNA1-222ENST00000520400 KDM4AO75164 1064 aa9.51□□□□□ -0.89
CTNNA1-222ENST00000520400 BCAMP50895 628 aa9.51□□□□□ -0.89
CTNNA1-222ENST00000520400 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
CTNNA1-222ENST00000520400 NUTM1Q86Y26 1132 aa9.51□□□□□ -0.89
CTNNA1-222ENST00000520400 CFHP08603 1231 aa9.5□□□□□ -0.89
CTNNA1-222ENST00000520400 RNF40O75150 1001 aa9.49□□□□□ -0.89
CTNNA1-222ENST00000520400 FUT2Q10981 343 aa9.49□□□□□ -0.89
CTNNA1-222ENST00000520400 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
CTNNA1-222ENST00000520400 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
CTNNA1-222ENST00000520400 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-222ENST00000520400 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
CTNNA1-222ENST00000520400 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-222ENST00000520400 LILRB3O75022 631 aa9.46□□□□□ -0.9
CTNNA1-222ENST00000520400 RFC5P40937 340 aa9.46□□□□□ -0.9
CTNNA1-222ENST00000520400 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
CTNNA1-222ENST00000520400 LRCH3Q96II8 777 aa9.46□□□□□ -0.9
CTNNA1-222ENST00000520400 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
CTNNA1-222ENST00000520400 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
CTNNA1-222ENST00000520400 TUSC1Q2TAM9 212 aa9.45□□□□□ -0.9
CTNNA1-222ENST00000520400 PUS10Q3MIT2 529 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-222ENST00000520400 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
CTNNA1-222ENST00000520400 FDX1P10109 184 aa9.44□□□□□ -0.9
CTNNA1-222ENST00000520400 APLP1P51693 650 aa9.44□□□□□ -0.9
CTNNA1-222ENST00000520400 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-222ENST00000520400 HRCP23327 699 aa9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 HDGFP51858 240 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 USP46P62068 366 aa9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 MCM6Q14566 821 aa9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 WNT2BQ93097 391 aa9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 ATP1B4Q9UN42 357 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 HPS5Q9UPZ3 1129 aa9.43□□□□□ -0.9
CTNNA1-222ENST00000520400 GJA5P36382 358 aa9.42□□□□□ -0.9
CTNNA1-222ENST00000520400 ANKK1Q8NFD2 765 aa9.42□□□□□ -0.9
CTNNA1-222ENST00000520400 MORN1Q5T089 497 aa9.41□□□□□ -0.9
CTNNA1-222ENST00000520400 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
CTNNA1-222ENST00000520400 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
CTNNA1-222ENST00000520400 ACTN4O43707 911 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-222ENST00000520400 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
CTNNA1-222ENST00000520400 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
CTNNA1-222ENST00000520400 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
CTNNA1-222ENST00000520400 CLUAP1Q96AJ1 413 aa9.39□□□□□ -0.91
CTNNA1-222ENST00000520400 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
CTNNA1-222ENST00000520400 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
CTNNA1-222ENST00000520400 CFAP99D6REC4 459 aa9.38□□□□□ -0.91
CTNNA1-222ENST00000520400 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-222ENST00000520400 PPP4CP60510 307 aa9.37□□□□□ -0.91
CTNNA1-222ENST00000520400 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
CTNNA1-222ENST00000520400 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-222ENST00000520400 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-222ENST00000520400 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
CTNNA1-222ENST00000520400 PRPF38BQ5VTL8 546 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-222ENST00000520400 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
CTNNA1-222ENST00000520400 MTMR14Q8NCE2 650 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms