RNA–Protein interactions for RNA: ENST00000520205.1

VTA1P2-201, Transcript of vesicle trafficking 1 pseudogene 2, humanhuman

BASIC

Gene VTA1P2, Length 911 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P2-201ENST00000520205 TMEM132AQ24JP5 1023 aa11.44□□□□□ -0.58
VTA1P2-201ENST00000520205 GPBP1L1Q9HC44 474 aaPredicted RBP11.44□□□□□ -0.58
VTA1P2-201ENST00000520205 RNF40O75150 1001 aa11.43□□□□□ -0.58
VTA1P2-201ENST00000520205 TSR3Q9UJK0 312 aaKnown RBP11.43□□□□□ -0.58
VTA1P2-201ENST00000520205 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
VTA1P2-201ENST00000520205 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
VTA1P2-201ENST00000520205 EYA1Q99502 592 aa11.41□□□□□ -0.58
VTA1P2-201ENST00000520205 OATP04181 439 aa11.4□□□□□ -0.58
VTA1P2-201ENST00000520205 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
VTA1P2-201ENST00000520205 PPP4CP60510 307 aa11.39□□□□□ -0.59
VTA1P2-201ENST00000520205 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
VTA1P2-201ENST00000520205 TTLL12Q14166 644 aaPredicted RBP11.37□□□□□ -0.59
VTA1P2-201ENST00000520205 METTL3Q86U44 580 aaKnown RBP11.37□□□□□ -0.59
VTA1P2-201ENST00000520205 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
VTA1P2-201ENST00000520205 PXYLP1Q8TE99 480 aa11.36□□□□□ -0.59
VTA1P2-201ENST00000520205 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
VTA1P2-201ENST00000520205 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
VTA1P2-201ENST00000520205 CLCN1P35523 988 aa11.33□□□□□ -0.6
VTA1P2-201ENST00000520205 APLP1P51693 650 aa11.33□□□□□ -0.6
VTA1P2-201ENST00000520205 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
VTA1P2-201ENST00000520205 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
VTA1P2-201ENST00000520205 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
VTA1P2-201ENST00000520205 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
VTA1P2-201ENST00000520205 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
VTA1P2-201ENST00000520205 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
VTA1P2-201ENST00000520205 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
VTA1P2-201ENST00000520205 GPCPD1Q9NPB8 672 aa11.31□□□□□ -0.6
VTA1P2-201ENST00000520205 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
VTA1P2-201ENST00000520205 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
VTA1P2-201ENST00000520205 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
VTA1P2-201ENST00000520205 A0A0G2JS52 829 aa11.29□□□□□ -0.6
VTA1P2-201ENST00000520205 DNAJB2P25686 324 aa11.29□□□□□ -0.6
VTA1P2-201ENST00000520205 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
VTA1P2-201ENST00000520205 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
VTA1P2-201ENST00000520205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
VTA1P2-201ENST00000520205 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
VTA1P2-201ENST00000520205 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
VTA1P2-201ENST00000520205 SLF2Q8IX21 1173 aa11.27□□□□□ -0.61
VTA1P2-201ENST00000520205 MTRQ99707 1265 aa11.27□□□□□ -0.61
VTA1P2-201ENST00000520205 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
VTA1P2-201ENST00000520205 MS4A1P11836 297 aa11.26□□□□□ -0.61
VTA1P2-201ENST00000520205 KCNC4Q03721 635 aa11.26□□□□□ -0.61
VTA1P2-201ENST00000520205 ZNF516Q92618 1163 aa11.26□□□□□ -0.61
VTA1P2-201ENST00000520205 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
VTA1P2-201ENST00000520205 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
VTA1P2-201ENST00000520205 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
VTA1P2-201ENST00000520205 COPS2P61201 443 aa11.23□□□□□ -0.61
VTA1P2-201ENST00000520205 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.61
VTA1P2-201ENST00000520205 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
VTA1P2-201ENST00000520205 SLC10A3P09131 477 aa11.2□□□□□ -0.62
VTA1P2-201ENST00000520205 IL21Q9HBE4 155 aa11.19□□□□□ -0.62
VTA1P2-201ENST00000520205 CFHP08603 1231 aa11.17□□□□□ -0.62
VTA1P2-201ENST00000520205 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
VTA1P2-201ENST00000520205 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
VTA1P2-201ENST00000520205 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
VTA1P2-201ENST00000520205 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
VTA1P2-201ENST00000520205 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
VTA1P2-201ENST00000520205 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
VTA1P2-201ENST00000520205 TLL1O43897 1013 aa11.13□□□□□ -0.63
VTA1P2-201ENST00000520205 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
VTA1P2-201ENST00000520205 CD46P15529 392 aa11.11□□□□□ -0.63
VTA1P2-201ENST00000520205 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
VTA1P2-201ENST00000520205 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
VTA1P2-201ENST00000520205 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
VTA1P2-201ENST00000520205 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
VTA1P2-201ENST00000520205 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
VTA1P2-201ENST00000520205 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
VTA1P2-201ENST00000520205 ZPR1O75312 459 aa11.09□□□□□ -0.63
VTA1P2-201ENST00000520205 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
VTA1P2-201ENST00000520205 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
VTA1P2-201ENST00000520205 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
VTA1P2-201ENST00000520205 DIXDC1Q155Q3 683 aa11.07□□□□□ -0.64
VTA1P2-201ENST00000520205 PRR14Q9BWN1 585 aa11.07□□□□□ -0.64
VTA1P2-201ENST00000520205 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
VTA1P2-201ENST00000520205 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
VTA1P2-201ENST00000520205 RGS20O76081 388 aa11.05□□□□□ -0.64
VTA1P2-201ENST00000520205 SKIV2LQ15477 1246 aaKnown RBP11.05□□□□□ -0.64
VTA1P2-201ENST00000520205 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
VTA1P2-201ENST00000520205 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
VTA1P2-201ENST00000520205 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
VTA1P2-201ENST00000520205 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.03□□□□□ -0.64
VTA1P2-201ENST00000520205 GCGRP47871 477 aa11.02□□□□□ -0.65
VTA1P2-201ENST00000520205 FUT2Q10981 343 aa11.02□□□□□ -0.65
VTA1P2-201ENST00000520205 PRKD2Q9BZL6 878 aa11.01□□□□□ -0.65
VTA1P2-201ENST00000520205 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
VTA1P2-201ENST00000520205 PPEF1O14829 653 aaPredicted RBP11□□□□□ -0.65
VTA1P2-201ENST00000520205 KDM4AO75164 1064 aa10.99□□□□□ -0.65
VTA1P2-201ENST00000520205 S1PR4O95977 384 aa10.99□□□□□ -0.65
VTA1P2-201ENST00000520205 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
VTA1P2-201ENST00000520205 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
VTA1P2-201ENST00000520205 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
VTA1P2-201ENST00000520205 USP46P62068 366 aa10.98□□□□□ -0.65
VTA1P2-201ENST00000520205 PROCA1Q8NCQ7 364 aaPredicted RBP10.98□□□□□ -0.65
VTA1P2-201ENST00000520205 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
VTA1P2-201ENST00000520205 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
VTA1P2-201ENST00000520205 NR1I2O75469 434 aa10.97□□□□□ -0.65
VTA1P2-201ENST00000520205 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
VTA1P2-201ENST00000520205 SPTLC1O15269 473 aa10.96□□□□□ -0.65
VTA1P2-201ENST00000520205 MORN1Q5T089 497 aa10.96□□□□□ -0.65
VTA1P2-201ENST00000520205 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms