RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 FAM135BQ49AJ0 1406 aa30.92■■■□□ 2.54
HDAC2-207ENST00000520170 GCC2Q8IWJ2 1684 aa30.9■■■□□ 2.54
HDAC2-207ENST00000520170 PPP1R15AO75807 674 aaPredicted RBP30.87■■■□□ 2.53
HDAC2-207ENST00000520170 NWD1Q149M9 1564 aa30.87■■■□□ 2.53
HDAC2-207ENST00000520170 ZFYVE9O95405 1425 aa30.86■■■□□ 2.53
HDAC2-207ENST00000520170 NKTRP30414 1462 aaKnown RBP30.86■■■□□ 2.53
HDAC2-207ENST00000520170 ROBO1Q9Y6N7 1651 aa30.86■■■□□ 2.53
HDAC2-207ENST00000520170 TMEM131LA2VDJ0 1609 aa30.85■■■□□ 2.53
HDAC2-207ENST00000520170 RIMS2Q9UQ26 1411 aa30.85■■■□□ 2.53
HDAC2-207ENST00000520170 CHGAP10645 457 aaKnown RBP30.85■■■□□ 2.53
HDAC2-207ENST00000520170 HDGFP51858 240 aaKnown RBP30.85■■■□□ 2.53
HDAC2-207ENST00000520170 UNC13BO14795 1591 aa30.84■■■□□ 2.53
HDAC2-207ENST00000520170 PLEKHG1Q9ULL1 1385 aa30.83■■■□□ 2.53
HDAC2-207ENST00000520170 CHD2O14647 1828 aaKnown RBP30.83■■■□□ 2.53
HDAC2-207ENST00000520170 RGS17Q9UGC6 210 aaPredicted RBP30.82■■■□□ 2.52
HDAC2-207ENST00000520170 MSH6P52701 1360 aa30.81■■■□□ 2.52
HDAC2-207ENST00000520170 E9PCH4 1651 aa30.81■■■□□ 2.52
HDAC2-207ENST00000520170 NUTM2DQ5VT03 806 aaPredicted RBP30.77■■■□□ 2.52
HDAC2-207ENST00000520170 ROCK1Q13464 1354 aa30.77■■■□□ 2.52
HDAC2-207ENST00000520170 ITGAEP38570 1179 aa30.76■■■□□ 2.51
HDAC2-207ENST00000520170 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.76■■■□□ 2.51
HDAC2-207ENST00000520170 SLAIN2Q9P270 581 aa30.76■■■□□ 2.51
HDAC2-207ENST00000520170 IQGAP3Q86VI3 1631 aa30.74■■■□□ 2.51
HDAC2-207ENST00000520170 TBX22Q9Y458 520 aa30.74■■■□□ 2.51
HDAC2-207ENST00000520170 PHLPP1O60346 1717 aa30.7■■■□□ 2.51
HDAC2-207ENST00000520170 NUP155O75694 1391 aa30.7■■■□□ 2.51
HDAC2-207ENST00000520170 PPARGC1BQ86YN6 1023 aaKnown RBP30.7■■■□□ 2.51
HDAC2-207ENST00000520170 C14orf37Q86TY3 774 aa30.69■■■□□ 2.5
HDAC2-207ENST00000520170 ADAMTS13Q76LX8 1427 aa30.66■■■□□ 2.5
HDAC2-207ENST00000520170 POTEAQ6S8J7 498 aa30.65■■■□□ 2.5
HDAC2-207ENST00000520170 DIP2AQ14689 1571 aa30.62■■■□□ 2.49
HDAC2-207ENST00000520170 NCOA3Q9Y6Q9 1424 aa30.62■■■□□ 2.49
HDAC2-207ENST00000520170 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.6■■■□□ 2.49
HDAC2-207ENST00000520170 PIK3R4Q99570 1358 aa30.59■■■□□ 2.49
HDAC2-207ENST00000520170 JCADQ9P266 1359 aa30.59■■■□□ 2.49
HDAC2-207ENST00000520170 ATF3P18847 181 aa30.57■■■□□ 2.48
HDAC2-207ENST00000520170 C19orf44Q9H6X5 657 aa30.57■■■□□ 2.48
HDAC2-207ENST00000520170 AMOTL2Q9Y2J4 779 aa30.57■■■□□ 2.48
HDAC2-207ENST00000520170 TRPM2O94759 1503 aa30.57■■■□□ 2.48
HDAC2-207ENST00000520170 CADPS2Q86UW7 1296 aa30.56■■■□□ 2.48
HDAC2-207ENST00000520170 COL16A1Q07092 1604 aaPredicted RBP30.55■■■□□ 2.48
HDAC2-207ENST00000520170 SPHKAPQ2M3C7 1700 aa30.55■■■□□ 2.48
HDAC2-207ENST00000520170 PTPRUQ92729 1446 aa30.53■■■□□ 2.48
HDAC2-207ENST00000520170 ZNF326Q5BKZ1 582 aaKnown RBP30.52■■■□□ 2.48
HDAC2-207ENST00000520170 NRXN3Q9Y4C0 1643 aa30.47■■■□□ 2.47
HDAC2-207ENST00000520170 AHDC1Q5TGY3 1603 aaPredicted RBP30.45■■■□□ 2.47
HDAC2-207ENST00000520170 SETBP1Q9Y6X0 1596 aa30.44■■■□□ 2.46
HDAC2-207ENST00000520170 SPATA31A6Q5VVP1 1343 aa30.44■■■□□ 2.46
HDAC2-207ENST00000520170 MEX3CQ5U5Q3 659 aaKnown RBP30.43■■■□□ 2.46
HDAC2-207ENST00000520170 XRN1Q8IZH2 1706 aaKnown RBP30.42■■■□□ 2.46
HDAC2-207ENST00000520170 BRINP3Q76B58 766 aa30.42■■■□□ 2.46
HDAC2-207ENST00000520170 LRP6O75581 1613 aa30.41■■■□□ 2.46
HDAC2-207ENST00000520170 SETD1AO15047 1707 aaKnown RBP30.41■■■□□ 2.46
HDAC2-207ENST00000520170 METP08581 1390 aa30.4■■■□□ 2.46
HDAC2-207ENST00000520170 CLTCL1P53675 1640 aa30.4■■■□□ 2.46
HDAC2-207ENST00000520170 SHPRHQ149N8 1683 aa30.39■■■□□ 2.46
HDAC2-207ENST00000520170 KIF1BO60333 1816 aa30.38■■■□□ 2.45
HDAC2-207ENST00000520170 DCCP43146 1447 aa30.37■■■□□ 2.45
HDAC2-207ENST00000520170 NEXMIFQ5QGS0 1516 aa30.34■■■□□ 2.45
HDAC2-207ENST00000520170 NAIPQ13075 1403 aa30.33■■■□□ 2.45
HDAC2-207ENST00000520170 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
HDAC2-207ENST00000520170 NUTM2BA6NNL0 878 aaPredicted RBP30.33■■■□□ 2.45
HDAC2-207ENST00000520170 NUTM2EB1AL46 878 aaPredicted RBP30.33■■■□□ 2.45
HDAC2-207ENST00000520170 NUTM2AQ8IVF1 878 aaPredicted RBP30.33■■■□□ 2.45
HDAC2-207ENST00000520170 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
HDAC2-207ENST00000520170 ZNF772Q68DY9 489 aaPredicted RBP30.32■■■□□ 2.44
HDAC2-207ENST00000520170 MST1RQ04912 1400 aa30.31■■■□□ 2.44
HDAC2-207ENST00000520170 TRIM52Q96A61 297 aa30.29■■■□□ 2.44
HDAC2-207ENST00000520170 NHSL1Q5SYE7 1610 aa30.26■■■□□ 2.44
HDAC2-207ENST00000520170 NALCNQ8IZF0 1738 aa30.26■■■□□ 2.43
HDAC2-207ENST00000520170 ADGRL3Q9HAR2 1447 aa30.26■■■□□ 2.43
HDAC2-207ENST00000520170 DDX17Q92841 729 aaKnown RBP30.24■■■□□ 2.43
HDAC2-207ENST00000520170 SETD5Q9C0A6 1442 aa30.23■■■□□ 2.43
HDAC2-207ENST00000520170 VGFO15240 615 aaPredicted RBP30.22■■■□□ 2.43
HDAC2-207ENST00000520170 LRRC59Q96AG4 307 aaKnown RBP30.22■■■□□ 2.43
HDAC2-207ENST00000520170 RXRBP28702 533 aa30.19■■■□□ 2.42
HDAC2-207ENST00000520170 SLC4A1APQ9BWU0 796 aaKnown RBP30.19■■■□□ 2.42
HDAC2-207ENST00000520170 AFF2P51816 1311 aa30.18■■■□□ 2.42
HDAC2-207ENST00000520170 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
HDAC2-207ENST00000520170 ROBO2Q9HCK4 1378 aa30.14■■■□□ 2.41
HDAC2-207ENST00000520170 C1orf167Q5SNV9 1468 aa30.13■■■□□ 2.41
HDAC2-207ENST00000520170 RPGRIP1LQ68CZ1 1315 aa30.13■■■□□ 2.41
HDAC2-207ENST00000520170 PNPLA6Q8IY17 1366 aa30.13■■■□□ 2.41
HDAC2-207ENST00000520170 PPLO60437 1756 aa30.13■■■□□ 2.41
HDAC2-207ENST00000520170 UPF1Q92900 1129 aaKnown RBP eCLIP30.12■■■□□ 2.41
HDAC2-207ENST00000520170 PTCH1Q13635 1447 aa30.12■■■□□ 2.41
HDAC2-207ENST00000520170 C8orf37Q96NL8 207 aa30.11■■■□□ 2.41
HDAC2-207ENST00000520170 ORAI2Q96SN7 254 aa30.09■■■□□ 2.41
HDAC2-207ENST00000520170 FOXD1Q16676 465 aa30.08■■■□□ 2.41
HDAC2-207ENST00000520170 ADAMTS2O95450 1211 aa30.05■■■□□ 2.4
HDAC2-207ENST00000520170 CDK12Q9NYV4 1490 aaPredicted RBP30.05■■■□□ 2.4
HDAC2-207ENST00000520170 QTRT2Q9H974 415 aaKnown RBP30.04■■■□□ 2.4
HDAC2-207ENST00000520170 LAMC1P11047 1609 aa30.04■■■□□ 2.4
HDAC2-207ENST00000520170 NGLY1Q96IV0 654 aa30.02■■■□□ 2.4
HDAC2-207ENST00000520170 SOS2Q07890 1332 aaPredicted RBP30.01■■■□□ 2.4
HDAC2-207ENST00000520170 PRAG1Q86YV5 1406 aa30.01■■■□□ 2.39
HDAC2-207ENST00000520170 RBM6P78332 1123 aaKnown RBP29.99■■■□□ 2.39
HDAC2-207ENST00000520170 RGL3Q3MIN7 710 aa29.99■■■□□ 2.39
HDAC2-207ENST00000520170 ADGRF5Q8IZF2 1346 aa29.97■■■□□ 2.39
HDAC2-207ENST00000520170 STK26Q9P289 416 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms