RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
POLB-208ENST00000520008 E9PCH4 1651 aa18.3■□□□□ 0.52
POLB-208ENST00000520008 IQGAP3Q86VI3 1631 aa18.29■□□□□ 0.52
POLB-208ENST00000520008 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
POLB-208ENST00000520008 TMEM94Q12767 1356 aa18.28■□□□□ 0.52
POLB-208ENST00000520008 KCNA6P17658 529 aa18.27■□□□□ 0.52
POLB-208ENST00000520008 FAM135BQ49AJ0 1406 aa18.26■□□□□ 0.51
POLB-208ENST00000520008 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
POLB-208ENST00000520008 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
POLB-208ENST00000520008 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
POLB-208ENST00000520008 ROBO1Q9Y6N7 1651 aa18.23■□□□□ 0.51
POLB-208ENST00000520008 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
POLB-208ENST00000520008 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
POLB-208ENST00000520008 ADAMTS13Q76LX8 1427 aa18.18■□□□□ 0.5
POLB-208ENST00000520008 PROSER2Q86WR7 435 aaPredicted RBP18.17■□□□□ 0.5
POLB-208ENST00000520008 RBM33Q96EV2 1170 aaKnown RBP18.16■□□□□ 0.5
POLB-208ENST00000520008 TBX22Q9Y458 520 aa18.14■□□□□ 0.49
POLB-208ENST00000520008 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
POLB-208ENST00000520008 NUP155O75694 1391 aa18.14■□□□□ 0.49
POLB-208ENST00000520008 MSH6P52701 1360 aa18.14■□□□□ 0.49
POLB-208ENST00000520008 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.49
POLB-208ENST00000520008 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
POLB-208ENST00000520008 RGS17Q9UGC6 210 aaPredicted RBP18.13■□□□□ 0.49
POLB-208ENST00000520008 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
POLB-208ENST00000520008 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
POLB-208ENST00000520008 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
POLB-208ENST00000520008 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
POLB-208ENST00000520008 BCANQ96GW7 911 aa18.11■□□□□ 0.49
POLB-208ENST00000520008 PHLPP1O60346 1717 aa18.1■□□□□ 0.49
POLB-208ENST00000520008 TRPM2O94759 1503 aa18.1■□□□□ 0.49
POLB-208ENST00000520008 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
POLB-208ENST00000520008 SETBP1Q9Y6X0 1596 aa18.09■□□□□ 0.49
POLB-208ENST00000520008 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
POLB-208ENST00000520008 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
POLB-208ENST00000520008 SLAIN2Q9P270 581 aa18.08■□□□□ 0.48
POLB-208ENST00000520008 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.48
POLB-208ENST00000520008 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
POLB-208ENST00000520008 CHGAP10645 457 aaKnown RBP18.07■□□□□ 0.48
POLB-208ENST00000520008 ITGAEP38570 1179 aa18.06■□□□□ 0.48
POLB-208ENST00000520008 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
POLB-208ENST00000520008 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
POLB-208ENST00000520008 AHDC1Q5TGY3 1603 aaPredicted RBP18.05■□□□□ 0.48
POLB-208ENST00000520008 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
POLB-208ENST00000520008 NAIPQ13075 1403 aa18.03■□□□□ 0.48
POLB-208ENST00000520008 NEXMIFQ5QGS0 1516 aa18.03■□□□□ 0.48
POLB-208ENST00000520008 JCADQ9P266 1359 aa18.02■□□□□ 0.47
POLB-208ENST00000520008 DCCP43146 1447 aa18.01■□□□□ 0.47
POLB-208ENST00000520008 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
POLB-208ENST00000520008 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
POLB-208ENST00000520008 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
POLB-208ENST00000520008 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
POLB-208ENST00000520008 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
POLB-208ENST00000520008 KIF1BO60333 1816 aa17.98■□□□□ 0.47
POLB-208ENST00000520008 LRP6O75581 1613 aa17.98■□□□□ 0.47
POLB-208ENST00000520008 SETD1AO15047 1707 aaKnown RBP17.97■□□□□ 0.47
POLB-208ENST00000520008 METP08581 1390 aa17.96■□□□□ 0.47
POLB-208ENST00000520008 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
POLB-208ENST00000520008 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
POLB-208ENST00000520008 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
POLB-208ENST00000520008 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
POLB-208ENST00000520008 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
POLB-208ENST00000520008 ATF3P18847 181 aa17.94■□□□□ 0.46
POLB-208ENST00000520008 MST1RQ04912 1400 aa17.94■□□□□ 0.46
POLB-208ENST00000520008 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
POLB-208ENST00000520008 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
POLB-208ENST00000520008 ZNF326Q5BKZ1 582 aaKnown RBP17.92■□□□□ 0.46
POLB-208ENST00000520008 BRINP3Q76B58 766 aa17.92■□□□□ 0.46
POLB-208ENST00000520008 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
POLB-208ENST00000520008 PPLO60437 1756 aa17.89■□□□□ 0.45
POLB-208ENST00000520008 PTCH1Q13635 1447 aa17.89■□□□□ 0.45
POLB-208ENST00000520008 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
POLB-208ENST00000520008 LAMC1P11047 1609 aa17.87■□□□□ 0.45
POLB-208ENST00000520008 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
POLB-208ENST00000520008 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
POLB-208ENST00000520008 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
POLB-208ENST00000520008 VGFO15240 615 aaPredicted RBP17.81■□□□□ 0.44
POLB-208ENST00000520008 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
POLB-208ENST00000520008 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
POLB-208ENST00000520008 TRIM52Q96A61 297 aa17.8■□□□□ 0.44
POLB-208ENST00000520008 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
POLB-208ENST00000520008 PNPLA6Q8IY17 1366 aa17.79■□□□□ 0.44
POLB-208ENST00000520008 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
POLB-208ENST00000520008 SPATA31E1Q6ZUB1 1445 aa17.77■□□□□ 0.44
POLB-208ENST00000520008 CDC42BPGQ6DT37 1551 aa17.77■□□□□ 0.44
POLB-208ENST00000520008 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
POLB-208ENST00000520008 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
POLB-208ENST00000520008 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
POLB-208ENST00000520008 CCDC144AA2RUR9 1427 aa17.74■□□□□ 0.43
POLB-208ENST00000520008 TECPR2O15040 1411 aa17.74■□□□□ 0.43
POLB-208ENST00000520008 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
POLB-208ENST00000520008 KNDC1Q76NI1 1749 aa17.73■□□□□ 0.43
POLB-208ENST00000520008 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
POLB-208ENST00000520008 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
POLB-208ENST00000520008 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
POLB-208ENST00000520008 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
POLB-208ENST00000520008 AFF2P51816 1311 aa17.72■□□□□ 0.43
POLB-208ENST00000520008 PIK3C2GO75747 1445 aa17.71■□□□□ 0.43
POLB-208ENST00000520008 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.42
POLB-208ENST00000520008 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
POLB-208ENST00000520008 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms