RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 RRBP1Q9P2E9 1410 aaKnown RBP34.69■■■■□ 3.14
ERGIC1-206ENST00000519860 TMEM131LA2VDJ0 1609 aa34.68■■■■□ 3.14
ERGIC1-206ENST00000519860 ILDR2Q71H61 639 aa34.66■■■■□ 3.14
ERGIC1-206ENST00000519860 ZFYVE9O95405 1425 aa34.65■■■■□ 3.14
ERGIC1-206ENST00000519860 RIMS2Q9UQ26 1411 aa34.65■■■■□ 3.14
ERGIC1-206ENST00000519860 PPP1R15AO75807 674 aaPredicted RBP34.64■■■■□ 3.14
ERGIC1-206ENST00000519860 XIRP1Q702N8 1843 aaKnown RBP34.63■■■■□ 3.13
ERGIC1-206ENST00000519860 KCNA6P17658 529 aa34.62■■■■□ 3.13
ERGIC1-206ENST00000519860 RBM33Q96EV2 1170 aaKnown RBP34.59■■■■□ 3.13
ERGIC1-206ENST00000519860 PLEKHG1Q9ULL1 1385 aa34.59■■■■□ 3.13
ERGIC1-206ENST00000519860 NUTM2DQ5VT03 806 aaPredicted RBP34.58■■■■□ 3.13
ERGIC1-206ENST00000519860 TMEM94Q12767 1356 aa34.58■■■■□ 3.13
ERGIC1-206ENST00000519860 HDGFP51858 240 aaKnown RBP34.57■■■■□ 3.12
ERGIC1-206ENST00000519860 PROSER2Q86WR7 435 aaPredicted RBP34.55■■■■□ 3.12
ERGIC1-206ENST00000519860 NAIPQ13075 1403 aa34.54■■■■□ 3.12
ERGIC1-206ENST00000519860 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.52■■■■□ 3.12
ERGIC1-206ENST00000519860 NWD1Q149M9 1564 aa34.51■■■■□ 3.12
ERGIC1-206ENST00000519860 NKTRP30414 1462 aaKnown RBP34.48■■■■□ 3.11
ERGIC1-206ENST00000519860 SPHKAPQ2M3C7 1700 aa34.48■■■■□ 3.11
ERGIC1-206ENST00000519860 MED1Q15648 1581 aaPredicted RBP34.45■■■■□ 3.11
ERGIC1-206ENST00000519860 TBX22Q9Y458 520 aa34.43■■■■□ 3.1
ERGIC1-206ENST00000519860 ADAMTS13Q76LX8 1427 aa34.42■■■■□ 3.1
ERGIC1-206ENST00000519860 CHD2O14647 1828 aaKnown RBP34.41■■■■□ 3.1
ERGIC1-206ENST00000519860 HFM1A2PYH4 1435 aa34.4■■■■□ 3.1
ERGIC1-206ENST00000519860 TRIM52Q96A61 297 aa34.4■■■■□ 3.1
ERGIC1-206ENST00000519860 ZNF326Q5BKZ1 582 aaKnown RBP34.38■■■■□ 3.09
ERGIC1-206ENST00000519860 MSH6P52701 1360 aa34.36■■■■□ 3.09
ERGIC1-206ENST00000519860 CLTCL1P53675 1640 aa34.35■■■■□ 3.09
ERGIC1-206ENST00000519860 DIP2AQ14689 1571 aa34.35■■■■□ 3.09
ERGIC1-206ENST00000519860 FAM135BQ49AJ0 1406 aa34.34■■■■□ 3.09
ERGIC1-206ENST00000519860 TRPM2O94759 1503 aa34.32■■■■□ 3.08
ERGIC1-206ENST00000519860 SOCS7O14512 581 aa34.32■■■■□ 3.08
ERGIC1-206ENST00000519860 ROBO1Q9Y6N7 1651 aa34.3■■■■□ 3.08
ERGIC1-206ENST00000519860 C14orf37Q86TY3 774 aa34.29■■■■□ 3.08
ERGIC1-206ENST00000519860 PIK3R4Q99570 1358 aa34.27■■■■□ 3.08
ERGIC1-206ENST00000519860 SLC4A1APQ9BWU0 796 aaKnown RBP34.26■■■■□ 3.08
ERGIC1-206ENST00000519860 PTPRUQ92729 1446 aa34.25■■■■□ 3.07
ERGIC1-206ENST00000519860 PHF23Q9BUL5 403 aaPredicted RBP34.25■■■■□ 3.07
ERGIC1-206ENST00000519860 SLAIN2Q9P270 581 aa34.25■■■■□ 3.07
ERGIC1-206ENST00000519860 AMOTL2Q9Y2J4 779 aa34.25■■■■□ 3.07
ERGIC1-206ENST00000519860 NRXN3Q9Y4C0 1643 aa34.25■■■■□ 3.07
ERGIC1-206ENST00000519860 SETBP1Q9Y6X0 1596 aa34.23■■■■□ 3.07
ERGIC1-206ENST00000519860 NEXMIFQ5QGS0 1516 aa34.21■■■■□ 3.07
ERGIC1-206ENST00000519860 KIF1BO60333 1816 aa34.2■■■■□ 3.07
ERGIC1-206ENST00000519860 NCOA3Q9Y6Q9 1424 aa34.19■■■■□ 3.06
ERGIC1-206ENST00000519860 METP08581 1390 aa34.17■■■■□ 3.06
ERGIC1-206ENST00000519860 FOXD1Q16676 465 aa34.17■■■■□ 3.06
ERGIC1-206ENST00000519860 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.14■■■■□ 3.06
ERGIC1-206ENST00000519860 C19orf44Q9H6X5 657 aa34.14■■■■□ 3.06
ERGIC1-206ENST00000519860 XRN1Q8IZH2 1706 aaKnown RBP34.13■■■■□ 3.05
ERGIC1-206ENST00000519860 ATF3P18847 181 aa34.11■■■■□ 3.05
ERGIC1-206ENST00000519860 CADPS2Q86UW7 1296 aa34.1■■■■□ 3.05
ERGIC1-206ENST00000519860 PHLPP1O60346 1717 aa34.1■■■■□ 3.05
ERGIC1-206ENST00000519860 VGFO15240 615 aaPredicted RBP34.04■■■■□ 3.04
ERGIC1-206ENST00000519860 MPHOSPH9Q99550 1183 aa34.02■■■■□ 3.04
ERGIC1-206ENST00000519860 RPGRIP1LQ68CZ1 1315 aa34■■■■□ 3.03
ERGIC1-206ENST00000519860 RGS17Q9UGC6 210 aaPredicted RBP33.99■■■■□ 3.03
ERGIC1-206ENST00000519860 COL16A1Q07092 1604 aaPredicted RBP33.97■■■■□ 3.03
ERGIC1-206ENST00000519860 CCDC144AA2RUR9 1427 aa33.97■■■■□ 3.03
ERGIC1-206ENST00000519860 PPLO60437 1756 aa33.97■■■■□ 3.03
ERGIC1-206ENST00000519860 DCCP43146 1447 aa33.96■■■■□ 3.03
ERGIC1-206ENST00000519860 JCADQ9P266 1359 aa33.96■■■■□ 3.03
ERGIC1-206ENST00000519860 BRINP3Q76B58 766 aa33.95■■■■□ 3.03
ERGIC1-206ENST00000519860 SETD1AO15047 1707 aaKnown RBP33.95■■■■□ 3.03
ERGIC1-206ENST00000519860 RGL3Q3MIN7 710 aa33.94■■■■□ 3.02
ERGIC1-206ENST00000519860 ADGRL3Q9HAR2 1447 aa33.92■■■■□ 3.02
ERGIC1-206ENST00000519860 AHDC1Q5TGY3 1603 aaPredicted RBP33.91■■■■□ 3.02
ERGIC1-206ENST00000519860 SETD5Q9C0A6 1442 aa33.91■■■■□ 3.02
ERGIC1-206ENST00000519860 NALCNQ8IZF0 1738 aa33.9■■■■□ 3.02
ERGIC1-206ENST00000519860 MST1RQ04912 1400 aa33.9■■■■□ 3.02
ERGIC1-206ENST00000519860 ROBO2Q9HCK4 1378 aa33.88■■■■□ 3.01
ERGIC1-206ENST00000519860 ASXL1Q8IXJ9 1541 aa33.87■■■■□ 3.01
ERGIC1-206ENST00000519860 SPATA31E1Q6ZUB1 1445 aa33.87■■■■□ 3.01
ERGIC1-206ENST00000519860 ADGRF5Q8IZF2 1346 aa33.86■■■■□ 3.01
ERGIC1-206ENST00000519860 PTCH1Q13635 1447 aa33.86■■■■□ 3.01
ERGIC1-206ENST00000519860 POTEAQ6S8J7 498 aa33.83■■■■□ 3.01
ERGIC1-206ENST00000519860 RAB3GAP2Q9H2M9 1393 aa33.82■■■■□ 3
ERGIC1-206ENST00000519860 LRP6O75581 1613 aa33.79■■■■□ 3
ERGIC1-206ENST00000519860 SPATA31A6Q5VVP1 1343 aa33.79■■■■□ 3
ERGIC1-206ENST00000519860 ANKRD30BQ9BXX2 1392 aa33.78■■■■□ 3
ERGIC1-206ENST00000519860 DDX17Q92841 729 aaKnown RBP33.78■■■■□ 3
ERGIC1-206ENST00000519860 IFT172Q9UG01 1749 aa33.77■■■■□ 3
ERGIC1-206ENST00000519860 ACIN1Q9UKV3 1341 aaKnown RBP33.77■■■■□ 3
ERGIC1-206ENST00000519860 SHPRHQ149N8 1683 aa33.76■■■□□ 2.99
ERGIC1-206ENST00000519860 PRAG1Q86YV5 1406 aa33.76■■■□□ 2.99
ERGIC1-206ENST00000519860 MEX3CQ5U5Q3 659 aaKnown RBP33.75■■■□□ 2.99
ERGIC1-206ENST00000519860 NHSL1Q5SYE7 1610 aa33.75■■■□□ 2.99
ERGIC1-206ENST00000519860 STK26Q9P289 416 aa33.74■■■□□ 2.99
ERGIC1-206ENST00000519860 C1orf167Q5SNV9 1468 aa33.74■■■□□ 2.99
ERGIC1-206ENST00000519860 NUTM2BA6NNL0 878 aaPredicted RBP33.71■■■□□ 2.99
ERGIC1-206ENST00000519860 NUTM2EB1AL46 878 aaPredicted RBP33.71■■■□□ 2.99
ERGIC1-206ENST00000519860 NUTM2AQ8IVF1 878 aaPredicted RBP33.71■■■□□ 2.99
ERGIC1-206ENST00000519860 TMEM132EQ6IEE7 984 aa33.7■■■□□ 2.99
ERGIC1-206ENST00000519860 PIK3C2GO75747 1445 aa33.69■■■□□ 2.98
ERGIC1-206ENST00000519860 ORAI2Q96SN7 254 aa33.68■■■□□ 2.98
ERGIC1-206ENST00000519860 LRRC59Q96AG4 307 aaKnown RBP33.66■■■□□ 2.98
ERGIC1-206ENST00000519860 WAPLQ7Z5K2 1190 aa33.65■■■□□ 2.98
ERGIC1-206ENST00000519860 LRPPRCP42704 1394 aaKnown RBP33.64■■■□□ 2.98
ERGIC1-206ENST00000519860 TECPR2O15040 1411 aa33.62■■■□□ 2.97
ERGIC1-206ENST00000519860 CDC42BPGQ6DT37 1551 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms