RNA–Protein interactions for RNA: ENST00000519771.5

POLB-207, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-207ENST00000519771 SLC4A3P48751 1232 aa12.77□□□□□ -0.37
POLB-207ENST00000519771 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
POLB-207ENST00000519771 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
POLB-207ENST00000519771 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
POLB-207ENST00000519771 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
POLB-207ENST00000519771 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
POLB-207ENST00000519771 METTL3Q86U44 580 aaKnown RBP12.75□□□□□ -0.37
POLB-207ENST00000519771 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
POLB-207ENST00000519771 MRPL50Q8N5N7 158 aaKnown RBP12.75□□□□□ -0.37
POLB-207ENST00000519771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.73□□□□□ -0.37
POLB-207ENST00000519771 PDE4DQ08499 809 aa12.73□□□□□ -0.37
POLB-207ENST00000519771 PXYLP1Q8TE99 480 aa12.73□□□□□ -0.37
POLB-207ENST00000519771 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
POLB-207ENST00000519771 CLCN1P35523 988 aa12.72□□□□□ -0.37
POLB-207ENST00000519771 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
POLB-207ENST00000519771 SMAPO00193 183 aa12.71□□□□□ -0.37
POLB-207ENST00000519771 DNAJB2P25686 324 aa12.71□□□□□ -0.37
POLB-207ENST00000519771 LAPTM4BQ86VI4 370 aa12.71□□□□□ -0.37
POLB-207ENST00000519771 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
POLB-207ENST00000519771 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
POLB-207ENST00000519771 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
POLB-207ENST00000519771 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
POLB-207ENST00000519771 AMHR2Q16671 573 aa12.69□□□□□ -0.38
POLB-207ENST00000519771 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
POLB-207ENST00000519771 EYA1Q99502 592 aa12.69□□□□□ -0.38
POLB-207ENST00000519771 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
POLB-207ENST00000519771 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
POLB-207ENST00000519771 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
POLB-207ENST00000519771 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
POLB-207ENST00000519771 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
POLB-207ENST00000519771 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
POLB-207ENST00000519771 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
POLB-207ENST00000519771 BHMG1C9JSJ3 638 aaPredicted RBP12.63□□□□□ -0.39
POLB-207ENST00000519771 RNF40O75150 1001 aa12.63□□□□□ -0.39
POLB-207ENST00000519771 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
POLB-207ENST00000519771 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
POLB-207ENST00000519771 NLRP7Q8WX94 980 aa12.62□□□□□ -0.39
POLB-207ENST00000519771 PHOX2BQ99453 314 aa12.62□□□□□ -0.39
POLB-207ENST00000519771 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
POLB-207ENST00000519771 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
POLB-207ENST00000519771 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
POLB-207ENST00000519771 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
POLB-207ENST00000519771 ZFRQ96KR1 1074 aaKnown RBP12.61□□□□□ -0.39
POLB-207ENST00000519771 KDM4CQ9H3R0 1056 aa12.61□□□□□ -0.39
POLB-207ENST00000519771 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
POLB-207ENST00000519771 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
POLB-207ENST00000519771 HRO43593 1189 aa12.6□□□□□ -0.39
POLB-207ENST00000519771 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
POLB-207ENST00000519771 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
POLB-207ENST00000519771 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
POLB-207ENST00000519771 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
POLB-207ENST00000519771 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
POLB-207ENST00000519771 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
POLB-207ENST00000519771 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
POLB-207ENST00000519771 RDH13Q8NBN7 331 aa12.58□□□□□ -0.4
POLB-207ENST00000519771 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
POLB-207ENST00000519771 SAMD7Q7Z3H4 446 aa12.57□□□□□ -0.4
POLB-207ENST00000519771 WNT2BQ93097 391 aa12.57□□□□□ -0.4
POLB-207ENST00000519771 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
POLB-207ENST00000519771 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
POLB-207ENST00000519771 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
POLB-207ENST00000519771 ARAP1Q96P48 1450 aa12.53□□□□□ -0.4
POLB-207ENST00000519771 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
POLB-207ENST00000519771 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
POLB-207ENST00000519771 PPP4CP60510 307 aa12.5□□□□□ -0.41
POLB-207ENST00000519771 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
POLB-207ENST00000519771 TMUB1Q9BVT8 246 aa12.5□□□□□ -0.41
POLB-207ENST00000519771 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
POLB-207ENST00000519771 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
POLB-207ENST00000519771 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
POLB-207ENST00000519771 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
POLB-207ENST00000519771 KCTD12Q96CX2 325 aaKnown RBP12.49□□□□□ -0.41
POLB-207ENST00000519771 BEGAINQ9BUH8 593 aa12.49□□□□□ -0.41
POLB-207ENST00000519771 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
POLB-207ENST00000519771 CFTRP13569 1480 aa12.48□□□□□ -0.41
POLB-207ENST00000519771 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
POLB-207ENST00000519771 DIXDC1Q155Q3 683 aa12.48□□□□□ -0.41
POLB-207ENST00000519771 PRR14Q9BWN1 585 aa12.48□□□□□ -0.41
POLB-207ENST00000519771 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
POLB-207ENST00000519771 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
POLB-207ENST00000519771 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
POLB-207ENST00000519771 MS4A1P11836 297 aa12.46□□□□□ -0.41
POLB-207ENST00000519771 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
POLB-207ENST00000519771 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
POLB-207ENST00000519771 BCAMP50895 628 aa12.45□□□□□ -0.42
POLB-207ENST00000519771 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
POLB-207ENST00000519771 CD46P15529 392 aa12.44□□□□□ -0.42
POLB-207ENST00000519771 TMEM132AQ24JP5 1023 aa12.43□□□□□ -0.42
POLB-207ENST00000519771 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
POLB-207ENST00000519771 CFHP08603 1231 aa12.42□□□□□ -0.42
POLB-207ENST00000519771 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
POLB-207ENST00000519771 GCGRP47871 477 aa12.4□□□□□ -0.42
POLB-207ENST00000519771 PTPN5P54829 565 aa12.4□□□□□ -0.42
POLB-207ENST00000519771 KDM4AO75164 1064 aa12.39□□□□□ -0.43
POLB-207ENST00000519771 SLC10A3P09131 477 aa12.39□□□□□ -0.43
POLB-207ENST00000519771 AQRO60306 1485 aaKnown RBP eCLIP12.39□□□□□ -0.43
POLB-207ENST00000519771 USP46P62068 366 aa12.38□□□□□ -0.43
POLB-207ENST00000519771 CHMP7Q8WUX9 453 aaPredicted RBP12.38□□□□□ -0.43
POLB-207ENST00000519771 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
POLB-207ENST00000519771 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms