RNA–Protein interactions for RNA: ENST00000518879.5

FAM49B-209, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-209ENST00000518879 PPP1R15AO75807 674 aaPredicted RBP28.28■■■□□ 2.12
FAM49B-209ENST00000518879 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
FAM49B-209ENST00000518879 ITGAEP38570 1179 aa28.26■■■□□ 2.11
FAM49B-209ENST00000518879 E9PCH4 1651 aa28.26■■■□□ 2.11
FAM49B-209ENST00000518879 TMEM94Q12767 1356 aa28.25■■■□□ 2.11
FAM49B-209ENST00000518879 IQGAP3Q86VI3 1631 aa28.25■■■□□ 2.11
FAM49B-209ENST00000518879 PROSER2Q86WR7 435 aaPredicted RBP28.25■■■□□ 2.11
FAM49B-209ENST00000518879 TMEM131LA2VDJ0 1609 aa28.25■■■□□ 2.11
FAM49B-209ENST00000518879 CHGAP10645 457 aaKnown RBP28.24■■■□□ 2.11
FAM49B-209ENST00000518879 RIMS2Q9UQ26 1411 aa28.24■■■□□ 2.11
FAM49B-209ENST00000518879 NKTRP30414 1462 aaKnown RBP28.23■■■□□ 2.11
FAM49B-209ENST00000518879 NWD1Q149M9 1564 aa28.23■■■□□ 2.11
FAM49B-209ENST00000518879 ZFYVE9O95405 1425 aa28.22■■■□□ 2.11
FAM49B-209ENST00000518879 PLEKHG1Q9ULL1 1385 aa28.22■■■□□ 2.11
FAM49B-209ENST00000518879 PPARGC1BQ86YN6 1023 aaKnown RBP28.2■■■□□ 2.1
FAM49B-209ENST00000518879 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.19■■■□□ 2.1
FAM49B-209ENST00000518879 NUP155O75694 1391 aa28.19■■■□□ 2.1
FAM49B-209ENST00000518879 FAM135BQ49AJ0 1406 aa28.17■■■□□ 2.1
FAM49B-209ENST00000518879 CHD2O14647 1828 aaKnown RBP28.16■■■□□ 2.1
FAM49B-209ENST00000518879 MSH6P52701 1360 aa28.16■■■□□ 2.1
FAM49B-209ENST00000518879 RBM33Q96EV2 1170 aaKnown RBP28.16■■■□□ 2.1
FAM49B-209ENST00000518879 ROBO1Q9Y6N7 1651 aa28.13■■■□□ 2.09
FAM49B-209ENST00000518879 DIP2AQ14689 1571 aa28.1■■■□□ 2.09
FAM49B-209ENST00000518879 TBX22Q9Y458 520 aa28.09■■■□□ 2.09
FAM49B-209ENST00000518879 NUTM2DQ5VT03 806 aaPredicted RBP28.08■■■□□ 2.09
FAM49B-209ENST00000518879 SPHKAPQ2M3C7 1700 aa28.07■■■□□ 2.08
FAM49B-209ENST00000518879 C14orf37Q86TY3 774 aa28.05■■■□□ 2.08
FAM49B-209ENST00000518879 SLAIN2Q9P270 581 aa28.02■■■□□ 2.08
FAM49B-209ENST00000518879 TRPM2O94759 1503 aa28.02■■■□□ 2.08
FAM49B-209ENST00000518879 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.08
FAM49B-209ENST00000518879 PIK3R4Q99570 1358 aa28.01■■■□□ 2.07
FAM49B-209ENST00000518879 PHLPP1O60346 1717 aa28.01■■■□□ 2.07
FAM49B-209ENST00000518879 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.07
FAM49B-209ENST00000518879 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
FAM49B-209ENST00000518879 RRBP1Q9P2E9 1410 aaKnown RBP27.98■■■□□ 2.07
FAM49B-209ENST00000518879 ATF3P18847 181 aa27.94■■■□□ 2.06
FAM49B-209ENST00000518879 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.93■■■□□ 2.06
FAM49B-209ENST00000518879 CADPS2Q86UW7 1296 aa27.93■■■□□ 2.06
FAM49B-209ENST00000518879 C19orf44Q9H6X5 657 aa27.91■■■□□ 2.06
FAM49B-209ENST00000518879 AMOTL2Q9Y2J4 779 aa27.91■■■□□ 2.06
FAM49B-209ENST00000518879 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
FAM49B-209ENST00000518879 KIF1BO60333 1816 aa27.9■■■□□ 2.06
FAM49B-209ENST00000518879 NAIPQ13075 1403 aa27.9■■■□□ 2.06
FAM49B-209ENST00000518879 CLTCL1P53675 1640 aa27.89■■■□□ 2.05
FAM49B-209ENST00000518879 JCADQ9P266 1359 aa27.88■■■□□ 2.05
FAM49B-209ENST00000518879 RGS17Q9UGC6 210 aaPredicted RBP27.88■■■□□ 2.05
FAM49B-209ENST00000518879 NRXN3Q9Y4C0 1643 aa27.88■■■□□ 2.05
FAM49B-209ENST00000518879 PTPRUQ92729 1446 aa27.85■■■□□ 2.05
FAM49B-209ENST00000518879 TRIM52Q96A61 297 aa27.85■■■□□ 2.05
FAM49B-209ENST00000518879 XRN1Q8IZH2 1706 aaKnown RBP27.84■■■□□ 2.05
FAM49B-209ENST00000518879 COL16A1Q07092 1604 aaPredicted RBP27.84■■■□□ 2.05
FAM49B-209ENST00000518879 NEXMIFQ5QGS0 1516 aa27.82■■■□□ 2.04
FAM49B-209ENST00000518879 HFM1A2PYH4 1435 aa27.81■■■□□ 2.04
FAM49B-209ENST00000518879 DCCP43146 1447 aa27.8■■■□□ 2.04
FAM49B-209ENST00000518879 AHDC1Q5TGY3 1603 aaPredicted RBP27.8■■■□□ 2.04
FAM49B-209ENST00000518879 METP08581 1390 aa27.77■■■□□ 2.04
FAM49B-209ENST00000518879 POTEAQ6S8J7 498 aa27.76■■■□□ 2.03
FAM49B-209ENST00000518879 SPATA31A6Q5VVP1 1343 aa27.75■■■□□ 2.03
FAM49B-209ENST00000518879 SLC4A1APQ9BWU0 796 aaKnown RBP27.75■■■□□ 2.03
FAM49B-209ENST00000518879 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
FAM49B-209ENST00000518879 SHPRHQ149N8 1683 aa27.74■■■□□ 2.03
FAM49B-209ENST00000518879 BRINP3Q76B58 766 aa27.73■■■□□ 2.03
FAM49B-209ENST00000518879 VGFO15240 615 aaPredicted RBP27.72■■■□□ 2.03
FAM49B-209ENST00000518879 ASXL1Q8IXJ9 1541 aa27.7■■■□□ 2.02
FAM49B-209ENST00000518879 ADGRL3Q9HAR2 1447 aa27.68■■■□□ 2.02
FAM49B-209ENST00000518879 NALCNQ8IZF0 1738 aa27.68■■■□□ 2.02
FAM49B-209ENST00000518879 MST1RQ04912 1400 aa27.67■■■□□ 2.02
FAM49B-209ENST00000518879 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
FAM49B-209ENST00000518879 LRP6O75581 1613 aa27.66■■■□□ 2.02
FAM49B-209ENST00000518879 PPLO60437 1756 aa27.65■■■□□ 2.02
FAM49B-209ENST00000518879 NHSL1Q5SYE7 1610 aa27.64■■■□□ 2.02
FAM49B-209ENST00000518879 SETD1AO15047 1707 aaKnown RBP27.64■■■□□ 2.01
FAM49B-209ENST00000518879 PTCH1Q13635 1447 aa27.62■■■□□ 2.01
FAM49B-209ENST00000518879 ZNF772Q68DY9 489 aaPredicted RBP27.62■■■□□ 2.01
FAM49B-209ENST00000518879 NUTM2BA6NNL0 878 aaPredicted RBP27.6■■■□□ 2.01
FAM49B-209ENST00000518879 NUTM2EB1AL46 878 aaPredicted RBP27.6■■■□□ 2.01
FAM49B-209ENST00000518879 NUTM2AQ8IVF1 878 aaPredicted RBP27.6■■■□□ 2.01
FAM49B-209ENST00000518879 SETD5Q9C0A6 1442 aa27.58■■■□□ 2.01
FAM49B-209ENST00000518879 LRRC59Q96AG4 307 aaKnown RBP27.58■■■□□ 2.01
FAM49B-209ENST00000518879 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2
FAM49B-209ENST00000518879 FOXD1Q16676 465 aa27.57■■■□□ 2
FAM49B-209ENST00000518879 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
FAM49B-209ENST00000518879 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
FAM49B-209ENST00000518879 PRAG1Q86YV5 1406 aa27.52■■■□□ 2
FAM49B-209ENST00000518879 DDX17Q92841 729 aaKnown RBP27.51■■□□□ 1.99
FAM49B-209ENST00000518879 MPHOSPH9Q99550 1183 aa27.5■■□□□ 1.99
FAM49B-209ENST00000518879 RGL3Q3MIN7 710 aa27.49■■□□□ 1.99
FAM49B-209ENST00000518879 PNPLA6Q8IY17 1366 aa27.47■■□□□ 1.99
FAM49B-209ENST00000518879 ANKRD30BQ9BXX2 1392 aa27.47■■□□□ 1.99
FAM49B-209ENST00000518879 ACIN1Q9UKV3 1341 aaKnown RBP27.46■■□□□ 1.99
FAM49B-209ENST00000518879 RXRBP28702 533 aa27.46■■□□□ 1.99
FAM49B-209ENST00000518879 IFT172Q9UG01 1749 aa27.46■■□□□ 1.99
FAM49B-209ENST00000518879 LAMC1P11047 1609 aa27.45■■□□□ 1.99
FAM49B-209ENST00000518879 AFF2P51816 1311 aa27.45■■□□□ 1.99
FAM49B-209ENST00000518879 ADGRF5Q8IZF2 1346 aa27.44■■□□□ 1.98
FAM49B-209ENST00000518879 C8orf37Q96NL8 207 aa27.44■■□□□ 1.98
FAM49B-209ENST00000518879 SPATA31E1Q6ZUB1 1445 aa27.43■■□□□ 1.98
FAM49B-209ENST00000518879 ORAI2Q96SN7 254 aa27.42■■□□□ 1.98
FAM49B-209ENST00000518879 CDC42BPGQ6DT37 1551 aa27.41■■□□□ 1.98
FAM49B-209ENST00000518879 STK26Q9P289 416 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms