RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM161AQ3B820 660 aa7.64□□□□□ -1.19
HMGB1P19-201ENST00000517578 P3H3Q8IVL6 736 aa7.64□□□□□ -1.19
HMGB1P19-201ENST00000517578 TMEM134Q9H6X4 195 aa7.64□□□□□ -1.19
HMGB1P19-201ENST00000517578 NUTM2FA1L443 756 aa7.63□□□□□ -1.19
HMGB1P19-201ENST00000517578 ZPR1O75312 459 aa7.63□□□□□ -1.19
HMGB1P19-201ENST00000517578 V9GY48 417 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P19-201ENST00000517578 GFRA3O60609 400 aa7.62□□□□□ -1.19
HMGB1P19-201ENST00000517578 SLC4A3P48751 1232 aa7.62□□□□□ -1.19
HMGB1P19-201ENST00000517578 LAPTM4AQ15012 233 aa7.62□□□□□ -1.19
HMGB1P19-201ENST00000517578 RBM46Q8TBY0 533 aaKnown RBP7.62□□□□□ -1.19
HMGB1P19-201ENST00000517578 RCCD1A6NED2 376 aa7.61□□□□□ -1.19
HMGB1P19-201ENST00000517578 BLOC1S3Q6QNY0 202 aa7.61□□□□□ -1.19
HMGB1P19-201ENST00000517578 PRR14Q9BWN1 585 aa7.61□□□□□ -1.19
HMGB1P19-201ENST00000517578 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
HMGB1P19-201ENST00000517578 FCHSD2O94868 740 aa7.6□□□□□ -1.19
HMGB1P19-201ENST00000517578 NRG2O14511 850 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P19-201ENST00000517578 TLL1O43897 1013 aa7.58□□□□□ -1.2
HMGB1P19-201ENST00000517578 SLC10A3P09131 477 aa7.58□□□□□ -1.2
HMGB1P19-201ENST00000517578 TMUB1Q9BVT8 246 aa7.58□□□□□ -1.2
HMGB1P19-201ENST00000517578 TESPA1A2RU30 521 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P19-201ENST00000517578 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
HMGB1P19-201ENST00000517578 CFHP08603 1231 aa7.57□□□□□ -1.2
HMGB1P19-201ENST00000517578 GGCXP38435 758 aa7.57□□□□□ -1.2
HMGB1P19-201ENST00000517578 PXYLP1Q8TE99 480 aa7.57□□□□□ -1.2
HMGB1P19-201ENST00000517578 EMID1Q96A84 441 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P19-201ENST00000517578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.56□□□□□ -1.2
HMGB1P19-201ENST00000517578 RNF223E7ERA6 249 aa7.56□□□□□ -1.2
HMGB1P19-201ENST00000517578 RBM26Q5T8P6 1007 aaKnown RBP7.56□□□□□ -1.2
HMGB1P19-201ENST00000517578 TRAF7Q6Q0C0 670 aa7.56□□□□□ -1.2
HMGB1P19-201ENST00000517578 PRKCSHP14314 528 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P19-201ENST00000517578 KMT5BQ4FZB7 885 aa7.55□□□□□ -1.2
HMGB1P19-201ENST00000517578 GPR37O15354 613 aa7.54□□□□□ -1.2
HMGB1P19-201ENST00000517578 CENPBP07199 599 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P19-201ENST00000517578 FECHP22830 423 aa7.54□□□□□ -1.2
HMGB1P19-201ENST00000517578 HIC1Q14526 733 aa7.54□□□□□ -1.2
HMGB1P19-201ENST00000517578 METTL3Q86U44 580 aaKnown RBP7.54□□□□□ -1.2
HMGB1P19-201ENST00000517578 OATP04181 439 aa7.53□□□□□ -1.2
HMGB1P19-201ENST00000517578 PDZRN3Q9UPQ7 1066 aa7.53□□□□□ -1.2
HMGB1P19-201ENST00000517578 S1PR4O95977 384 aa7.52□□□□□ -1.21
HMGB1P19-201ENST00000517578 TRIM67Q6ZTA4 783 aa7.52□□□□□ -1.21
HMGB1P19-201ENST00000517578 PPEF1O14829 653 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P19-201ENST00000517578 GNPATO15228 680 aa7.5□□□□□ -1.21
HMGB1P19-201ENST00000517578 ADH1BP00325 375 aa7.5□□□□□ -1.21
HMGB1P19-201ENST00000517578 SLC19A1P41440 591 aa7.5□□□□□ -1.21
HMGB1P19-201ENST00000517578 ANKLE1Q8NAG6 615 aa7.5□□□□□ -1.21
HMGB1P19-201ENST00000517578 NR1I2O75469 434 aa7.48□□□□□ -1.21
HMGB1P19-201ENST00000517578 PUS10Q3MIT2 529 aaKnown RBP7.48□□□□□ -1.21
HMGB1P19-201ENST00000517578 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
HMGB1P19-201ENST00000517578 SMYD5Q6GMV2 418 aa7.48□□□□□ -1.21
HMGB1P19-201ENST00000517578 LIAT1Q6ZQX7 453 aa7.48□□□□□ -1.21
HMGB1P19-201ENST00000517578 PLA2G2CQ5R387 149 aa7.47□□□□□ -1.21
HMGB1P19-201ENST00000517578 SCUBE3Q8IX30 993 aa7.47□□□□□ -1.21
HMGB1P19-201ENST00000517578 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
HMGB1P19-201ENST00000517578 PHOX2BQ99453 314 aa7.47□□□□□ -1.21
HMGB1P19-201ENST00000517578 BCL11AQ9H165 835 aa7.47□□□□□ -1.21
HMGB1P19-201ENST00000517578 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P19-201ENST00000517578 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
HMGB1P19-201ENST00000517578 SLC6A16Q9GZN6 736 aa7.46□□□□□ -1.22
HMGB1P19-201ENST00000517578 DAXXQ9UER7 740 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P19-201ENST00000517578 PRR20EP86478 221 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 PRR20CP86479 221 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 PRR20DP86480 221 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 PRR20BP86481 221 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 PRR20AP86496 221 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 RSPH4AQ5TD94 716 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 RDH13Q8NBN7 331 aa7.44□□□□□ -1.22
HMGB1P19-201ENST00000517578 GDF9O60383 454 aa7.43□□□□□ -1.22
HMGB1P19-201ENST00000517578 FUT2Q10981 343 aa7.43□□□□□ -1.22
HMGB1P19-201ENST00000517578 MORN1Q5T089 497 aa7.43□□□□□ -1.22
HMGB1P19-201ENST00000517578 ZNF697Q5TEC3 545 aa7.43□□□□□ -1.22
HMGB1P19-201ENST00000517578 SPSB2Q99619 263 aa7.43□□□□□ -1.22
HMGB1P19-201ENST00000517578 DDX11L8A8MPP1 907 aa7.42□□□□□ -1.22
HMGB1P19-201ENST00000517578 GPIHBP1Q8IV16 184 aa7.42□□□□□ -1.22
HMGB1P19-201ENST00000517578 THAP11Q96EK4 314 aa7.42□□□□□ -1.22
HMGB1P19-201ENST00000517578 GCGRP47871 477 aa7.4□□□□□ -1.22
HMGB1P19-201ENST00000517578 ZNF787Q6DD87 383 aa7.4□□□□□ -1.22
HMGB1P19-201ENST00000517578 TNFRSF10AO00220 468 aa7.39□□□□□ -1.23
HMGB1P19-201ENST00000517578 DGAT1O75907 488 aa7.39□□□□□ -1.23
HMGB1P19-201ENST00000517578 ATP6V1AP38606 617 aa7.39□□□□□ -1.23
HMGB1P19-201ENST00000517578 SULF1Q8IWU6 871 aa7.39□□□□□ -1.23
HMGB1P19-201ENST00000517578 FAM160A2Q8N612 972 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P19-201ENST00000517578 SLC27A5Q9Y2P5 690 aa7.39□□□□□ -1.23
HMGB1P19-201ENST00000517578 PKDCCQ504Y2 493 aa7.38□□□□□ -1.23
HMGB1P19-201ENST00000517578 PRDM9Q9NQV7 894 aa7.37□□□□□ -1.23
HMGB1P19-201ENST00000517578 PKD2L1Q9P0L9 805 aa7.37□□□□□ -1.23
HMGB1P19-201ENST00000517578 FCF1Q9Y324 198 aaKnown RBP7.37□□□□□ -1.23
HMGB1P19-201ENST00000517578 FAM187AA6NFU0 413 aa7.36□□□□□ -1.23
HMGB1P19-201ENST00000517578 TULP1O00294 542 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P19-201ENST00000517578 FMNL1O95466 1100 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P19-201ENST00000517578 BRICD5Q6PL45 260 aa7.36□□□□□ -1.23
HMGB1P19-201ENST00000517578 SALL2Q9Y467 1007 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P19-201ENST00000517578 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
HMGB1P19-201ENST00000517578 POTECB2RU33 542 aa7.34□□□□□ -1.23
HMGB1P19-201ENST00000517578 RPIAP49247 311 aa7.34□□□□□ -1.23
HMGB1P19-201ENST00000517578 MAP2K5Q13163 448 aa7.34□□□□□ -1.23
HMGB1P19-201ENST00000517578 CD46P15529 392 aa7.33□□□□□ -1.24
HMGB1P19-201ENST00000517578 FOXC1Q12948 553 aa7.33□□□□□ -1.24
HMGB1P19-201ENST00000517578 MSS51Q4VC12 460 aa7.33□□□□□ -1.24
HMGB1P19-201ENST00000517578 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
HMGB1P19-201ENST00000517578 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms