RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 AXIN2Q9Y2T1 843 aa9.03□□□□□ -0.96
LINC00534-201ENST00000517400 ERICH6Q7L0X2 663 aa9.02□□□□□ -0.97
LINC00534-201ENST00000517400 BEGAINQ9BUH8 593 aa9.02□□□□□ -0.97
LINC00534-201ENST00000517400 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
LINC00534-201ENST00000517400 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
LINC00534-201ENST00000517400 SMAPO00193 183 aa9□□□□□ -0.97
LINC00534-201ENST00000517400 RSPH6AQ9H0K4 717 aa9□□□□□ -0.97
LINC00534-201ENST00000517400 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
LINC00534-201ENST00000517400 SULF1Q8IWU6 871 aa8.99□□□□□ -0.97
LINC00534-201ENST00000517400 TK2O00142 265 aa8.98□□□□□ -0.97
LINC00534-201ENST00000517400 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
LINC00534-201ENST00000517400 ANKRD13DQ6ZTN6 518 aa8.98□□□□□ -0.97
LINC00534-201ENST00000517400 MYT1LQ9UL68 1186 aa8.98□□□□□ -0.97
LINC00534-201ENST00000517400 CD46P15529 392 aa8.97□□□□□ -0.97
LINC00534-201ENST00000517400 RNF166Q96A37 237 aaPredicted RBP8.97□□□□□ -0.97
LINC00534-201ENST00000517400 BHMG1C9JSJ3 638 aaPredicted RBP8.96□□□□□ -0.98
LINC00534-201ENST00000517400 SKIV2LQ15477 1246 aaKnown RBP8.96□□□□□ -0.98
LINC00534-201ENST00000517400 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.98
LINC00534-201ENST00000517400 FAM98CQ17RN3 349 aaKnown RBP8.95□□□□□ -0.98
LINC00534-201ENST00000517400 LAPTM4BQ86VI4 370 aa8.95□□□□□ -0.98
LINC00534-201ENST00000517400 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
LINC00534-201ENST00000517400 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
LINC00534-201ENST00000517400 PCMTD1Q96MG8 357 aaPredicted RBP8.94□□□□□ -0.98
LINC00534-201ENST00000517400 SEPT9Q9UHD8 586 aaPredicted RBP8.94□□□□□ -0.98
LINC00534-201ENST00000517400 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
LINC00534-201ENST00000517400 NBPF3Q9H094 633 aa8.93□□□□□ -0.98
LINC00534-201ENST00000517400 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
LINC00534-201ENST00000517400 RSPH4AQ5TD94 716 aa8.92□□□□□ -0.98
LINC00534-201ENST00000517400 MYSM1Q5VVJ2 828 aa8.92□□□□□ -0.98
LINC00534-201ENST00000517400 SPIRE2Q8WWL2 714 aa8.92□□□□□ -0.98
LINC00534-201ENST00000517400 TBC1D2Q9BYX2 928 aa8.92□□□□□ -0.98
LINC00534-201ENST00000517400 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
LINC00534-201ENST00000517400 HRO43593 1189 aa8.89□□□□□ -0.99
LINC00534-201ENST00000517400 C14orf37Q86TY3 774 aa8.89□□□□□ -0.99
LINC00534-201ENST00000517400 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
LINC00534-201ENST00000517400 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
LINC00534-201ENST00000517400 SLC10A3P09131 477 aa8.88□□□□□ -0.99
LINC00534-201ENST00000517400 GCGRP47871 477 aa8.88□□□□□ -0.99
LINC00534-201ENST00000517400 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
LINC00534-201ENST00000517400 CLK2P49760 499 aaKnown RBP8.88□□□□□ -0.99
LINC00534-201ENST00000517400 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
LINC00534-201ENST00000517400 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
LINC00534-201ENST00000517400 ZFRQ96KR1 1074 aaKnown RBP8.88□□□□□ -0.99
LINC00534-201ENST00000517400 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.88□□□□□ -0.99
LINC00534-201ENST00000517400 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
LINC00534-201ENST00000517400 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
LINC00534-201ENST00000517400 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
LINC00534-201ENST00000517400 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
LINC00534-201ENST00000517400 KDM4AO75164 1064 aa8.86□□□□□ -0.99
LINC00534-201ENST00000517400 GJA5P36382 358 aa8.86□□□□□ -0.99
LINC00534-201ENST00000517400 RIC3Q7Z5B4 369 aa8.86□□□□□ -0.99
LINC00534-201ENST00000517400 SPTLC1O15269 473 aa8.85□□□□□ -0.99
LINC00534-201ENST00000517400 USP46P62068 366 aa8.85□□□□□ -0.99
LINC00534-201ENST00000517400 MOXD2PA6NHM9 499 aa8.84□□□□□ -0.99
LINC00534-201ENST00000517400 RSBN1LQ6PCB5 846 aaPredicted RBP8.84□□□□□ -0.99
LINC00534-201ENST00000517400 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
LINC00534-201ENST00000517400 ATP1B4Q9UN42 357 aaPredicted RBP8.83□□□□□ -1
LINC00534-201ENST00000517400 FLIIQ13045 1269 aa8.82□□□□□ -1
LINC00534-201ENST00000517400 NECTIN2Q92692 538 aa8.82□□□□□ -1
LINC00534-201ENST00000517400 STAC3Q96MF2 364 aa8.82□□□□□ -1
LINC00534-201ENST00000517400 NDUFV2P19404 249 aa8.81□□□□□ -1
LINC00534-201ENST00000517400 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
LINC00534-201ENST00000517400 LRCH3Q96II8 777 aa8.81□□□□□ -1
LINC00534-201ENST00000517400 HOXA2O43364 376 aa8.8□□□□□ -1
LINC00534-201ENST00000517400 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
LINC00534-201ENST00000517400 GOLGA8CPA6NN73 597 aa8.79□□□□□ -1
LINC00534-201ENST00000517400 RNF40O75150 1001 aa8.79□□□□□ -1
LINC00534-201ENST00000517400 CFHP08603 1231 aa8.79□□□□□ -1
LINC00534-201ENST00000517400 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
LINC00534-201ENST00000517400 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
LINC00534-201ENST00000517400 LILRB3O75022 631 aa8.78□□□□□ -1
LINC00534-201ENST00000517400 RFC5P40937 340 aa8.78□□□□□ -1
LINC00534-201ENST00000517400 PRPF38BQ5VTL8 546 aaKnown RBP8.78□□□□□ -1
LINC00534-201ENST00000517400 ANKK1Q8NFD2 765 aa8.78□□□□□ -1
LINC00534-201ENST00000517400 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
LINC00534-201ENST00000517400 FDX1P10109 184 aa8.77□□□□□ -1.01
LINC00534-201ENST00000517400 ATP6V1AP38606 617 aa8.77□□□□□ -1.01
LINC00534-201ENST00000517400 FUT2Q10981 343 aa8.77□□□□□ -1.01
LINC00534-201ENST00000517400 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
LINC00534-201ENST00000517400 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1.01
LINC00534-201ENST00000517400 TMEM259Q4ZIN3 620 aa8.76□□□□□ -1.01
LINC00534-201ENST00000517400 BANK1Q8NDB2 785 aa8.76□□□□□ -1.01
LINC00534-201ENST00000517400 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
LINC00534-201ENST00000517400 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
LINC00534-201ENST00000517400 PPP4CP60510 307 aa8.75□□□□□ -1.01
LINC00534-201ENST00000517400 QPCTQ16769 361 aa8.75□□□□□ -1.01
LINC00534-201ENST00000517400 CSPP1Q1MSJ5 1256 aa8.75□□□□□ -1.01
LINC00534-201ENST00000517400 WNT2BQ93097 391 aa8.75□□□□□ -1.01
LINC00534-201ENST00000517400 PRR14Q9BWN1 585 aa8.75□□□□□ -1.01
LINC00534-201ENST00000517400 HLA-CQ95604 372 aa8.74□□□□□ -1.01
LINC00534-201ENST00000517400 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
LINC00534-201ENST00000517400 TSR3Q9UJK0 312 aaKnown RBP8.74□□□□□ -1.01
LINC00534-201ENST00000517400 PCDHGC3Q9UN70 934 aa8.74□□□□□ -1.01
LINC00534-201ENST00000517400 HRCP23327 699 aa8.73□□□□□ -1.01
LINC00534-201ENST00000517400 BCAMP50895 628 aa8.73□□□□□ -1.01
LINC00534-201ENST00000517400 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
LINC00534-201ENST00000517400 MCM6Q14566 821 aa8.73□□□□□ -1.01
LINC00534-201ENST00000517400 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
LINC00534-201ENST00000517400 NUTM2BA6NNL0 878 aaPredicted RBP8.72□□□□□ -1.01
LINC00534-201ENST00000517400 NUTM2EB1AL46 878 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms