RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.81
RNU6-1028P-201ENST00000517164 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
RNU6-1028P-201ENST00000517164 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
RNU6-1028P-201ENST00000517164 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
RNU6-1028P-201ENST00000517164 HRO43593 1189 aa10.01□□□□□ -0.81
RNU6-1028P-201ENST00000517164 POTEGQ6S5H5 508 aa10.01□□□□□ -0.81
RNU6-1028P-201ENST00000517164 DDX11L8A8MPP1 907 aa10□□□□□ -0.81
RNU6-1028P-201ENST00000517164 LAPTM4BQ86VI4 370 aa10□□□□□ -0.81
RNU6-1028P-201ENST00000517164 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
RNU6-1028P-201ENST00000517164 POTEMA6NI47 508 aa9.99□□□□□ -0.81
RNU6-1028P-201ENST00000517164 CD46P15529 392 aa9.98□□□□□ -0.81
RNU6-1028P-201ENST00000517164 SAMD7Q7Z3H4 446 aa9.98□□□□□ -0.81
RNU6-1028P-201ENST00000517164 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
RNU6-1028P-201ENST00000517164 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
RNU6-1028P-201ENST00000517164 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
RNU6-1028P-201ENST00000517164 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
RNU6-1028P-201ENST00000517164 CDAN1Q8IWY9 1227 aa9.95□□□□□ -0.82
RNU6-1028P-201ENST00000517164 SLC10A3P09131 477 aa9.94□□□□□ -0.82
RNU6-1028P-201ENST00000517164 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
RNU6-1028P-201ENST00000517164 RNF40O75150 1001 aa9.93□□□□□ -0.82
RNU6-1028P-201ENST00000517164 SLF2Q8IX21 1173 aa9.92□□□□□ -0.82
RNU6-1028P-201ENST00000517164 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
RNU6-1028P-201ENST00000517164 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
RNU6-1028P-201ENST00000517164 SH3D19Q5HYK7 790 aa9.91□□□□□ -0.82
RNU6-1028P-201ENST00000517164 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
RNU6-1028P-201ENST00000517164 LRCH3Q96II8 777 aa9.91□□□□□ -0.82
RNU6-1028P-201ENST00000517164 TBC1D2Q9BYX2 928 aa9.91□□□□□ -0.82
RNU6-1028P-201ENST00000517164 GOPCQ9HD26 462 aa9.91□□□□□ -0.82
RNU6-1028P-201ENST00000517164 MYSM1Q5VVJ2 828 aa9.9□□□□□ -0.82
RNU6-1028P-201ENST00000517164 ANKK1Q8NFD2 765 aa9.9□□□□□ -0.82
RNU6-1028P-201ENST00000517164 RSPH6AQ9H0K4 717 aa9.9□□□□□ -0.82
RNU6-1028P-201ENST00000517164 GCGRP47871 477 aa9.89□□□□□ -0.83
RNU6-1028P-201ENST00000517164 SLC4A3P48751 1232 aa9.89□□□□□ -0.83
RNU6-1028P-201ENST00000517164 RSPH4AQ5TD94 716 aa9.89□□□□□ -0.83
RNU6-1028P-201ENST00000517164 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
RNU6-1028P-201ENST00000517164 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
RNU6-1028P-201ENST00000517164 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
RNU6-1028P-201ENST00000517164 KDM4AO75164 1064 aa9.87□□□□□ -0.83
RNU6-1028P-201ENST00000517164 CFHP08603 1231 aa9.87□□□□□ -0.83
RNU6-1028P-201ENST00000517164 BCAMP50895 628 aa9.87□□□□□ -0.83
RNU6-1028P-201ENST00000517164 SKIV2LQ15477 1246 aaKnown RBP9.87□□□□□ -0.83
RNU6-1028P-201ENST00000517164 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
RNU6-1028P-201ENST00000517164 WNT2BQ93097 391 aa9.87□□□□□ -0.83
RNU6-1028P-201ENST00000517164 SOWAHBA6NEL2 793 aa9.86□□□□□ -0.83
RNU6-1028P-201ENST00000517164 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
RNU6-1028P-201ENST00000517164 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
RNU6-1028P-201ENST00000517164 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
RNU6-1028P-201ENST00000517164 MOXD2PA6NHM9 499 aa9.84□□□□□ -0.83
RNU6-1028P-201ENST00000517164 LIMD1Q9UGP4 676 aa9.84□□□□□ -0.83
RNU6-1028P-201ENST00000517164 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
RNU6-1028P-201ENST00000517164 NDUFV2P19404 249 aa9.83□□□□□ -0.84
RNU6-1028P-201ENST00000517164 RIC3Q7Z5B4 369 aa9.83□□□□□ -0.84
RNU6-1028P-201ENST00000517164 HOXA2O43364 376 aa9.82□□□□□ -0.84
RNU6-1028P-201ENST00000517164 FUT2Q10981 343 aa9.82□□□□□ -0.84
RNU6-1028P-201ENST00000517164 RSBN1LQ6PCB5 846 aaPredicted RBP9.82□□□□□ -0.84
RNU6-1028P-201ENST00000517164 HLA-CQ95604 372 aa9.82□□□□□ -0.84
RNU6-1028P-201ENST00000517164 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
RNU6-1028P-201ENST00000517164 SPTLC1O15269 473 aa9.81□□□□□ -0.84
RNU6-1028P-201ENST00000517164 PPP4CP60510 307 aa9.81□□□□□ -0.84
RNU6-1028P-201ENST00000517164 USP46P62068 366 aa9.81□□□□□ -0.84
RNU6-1028P-201ENST00000517164 KMT5BQ4FZB7 885 aa9.81□□□□□ -0.84
RNU6-1028P-201ENST00000517164 KCTD12Q96CX2 325 aaKnown RBP9.81□□□□□ -0.84
RNU6-1028P-201ENST00000517164 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.81□□□□□ -0.84
RNU6-1028P-201ENST00000517164 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
RNU6-1028P-201ENST00000517164 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
RNU6-1028P-201ENST00000517164 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
RNU6-1028P-201ENST00000517164 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
RNU6-1028P-201ENST00000517164 WBP1LQ9NX94 342 aa9.79□□□□□ -0.84
RNU6-1028P-201ENST00000517164 ACTN4O43707 911 aaKnown RBP9.78□□□□□ -0.84
RNU6-1028P-201ENST00000517164 APLP1P51693 650 aa9.78□□□□□ -0.84
RNU6-1028P-201ENST00000517164 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
RNU6-1028P-201ENST00000517164 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
RNU6-1028P-201ENST00000517164 PCDHB15Q9Y5E8 787 aa9.78□□□□□ -0.84
RNU6-1028P-201ENST00000517164 FDX1P10109 184 aa9.77□□□□□ -0.85
RNU6-1028P-201ENST00000517164 GJA5P36382 358 aa9.77□□□□□ -0.85
RNU6-1028P-201ENST00000517164 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
RNU6-1028P-201ENST00000517164 TUSC1Q2TAM9 212 aa9.76□□□□□ -0.85
RNU6-1028P-201ENST00000517164 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
RNU6-1028P-201ENST00000517164 PCDHGC3Q9UN70 934 aa9.76□□□□□ -0.85
RNU6-1028P-201ENST00000517164 QPCTQ16769 361 aa9.75□□□□□ -0.85
RNU6-1028P-201ENST00000517164 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
RNU6-1028P-201ENST00000517164 PRR14Q9BWN1 585 aa9.75□□□□□ -0.85
RNU6-1028P-201ENST00000517164 MYT1LQ9UL68 1186 aa9.75□□□□□ -0.85
RNU6-1028P-201ENST00000517164 MORN1Q5T089 497 aa9.74□□□□□ -0.85
RNU6-1028P-201ENST00000517164 CABLES1Q8TDN4 633 aa9.74□□□□□ -0.85
RNU6-1028P-201ENST00000517164 PTPN5P54829 565 aa9.73□□□□□ -0.85
RNU6-1028P-201ENST00000517164 LILRB3O75022 631 aa9.72□□□□□ -0.85
RNU6-1028P-201ENST00000517164 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
RNU6-1028P-201ENST00000517164 PCDH10Q9P2E7 1040 aa9.72□□□□□ -0.85
RNU6-1028P-201ENST00000517164 RFC5P40937 340 aa9.71□□□□□ -0.86
RNU6-1028P-201ENST00000517164 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
RNU6-1028P-201ENST00000517164 TIMELESSQ9UNS1 1208 aa9.71□□□□□ -0.86
RNU6-1028P-201ENST00000517164 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
RNU6-1028P-201ENST00000517164 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
RNU6-1028P-201ENST00000517164 HRCP23327 699 aa9.7□□□□□ -0.86
RNU6-1028P-201ENST00000517164 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
RNU6-1028P-201ENST00000517164 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
RNU6-1028P-201ENST00000517164 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
RNU6-1028P-201ENST00000517164 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
RNU6-1028P-201ENST00000517164 MTMR2Q13614 643 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms