RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 TTC13Q8NBP0 860 aa8.14□□□□□ -1.11
SNORA48.10-201ENST00000516965 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
SNORA48.10-201ENST00000516965 PXYLP1Q8TE99 480 aa8.14□□□□□ -1.11
SNORA48.10-201ENST00000516965 CDCA7LQ96GN5 454 aa8.14□□□□□ -1.11
SNORA48.10-201ENST00000516965 LAPTM4BQ86VI4 370 aa8.13□□□□□ -1.11
SNORA48.10-201ENST00000516965 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
SNORA48.10-201ENST00000516965 SH3D19Q5HYK7 790 aa8.12□□□□□ -1.11
SNORA48.10-201ENST00000516965 KCTD12Q96CX2 325 aaKnown RBP8.12□□□□□ -1.11
SNORA48.10-201ENST00000516965 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
SNORA48.10-201ENST00000516965 FLIIQ13045 1269 aa8.11□□□□□ -1.11
SNORA48.10-201ENST00000516965 BEGAINQ9BUH8 593 aa8.11□□□□□ -1.11
SNORA48.10-201ENST00000516965 HCSTQ9UBK5 93 aa8.11□□□□□ -1.11
SNORA48.10-201ENST00000516965 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
SNORA48.10-201ENST00000516965 NLRP7Q8WX94 980 aa8.1□□□□□ -1.11
SNORA48.10-201ENST00000516965 WNT2BQ93097 391 aa8.1□□□□□ -1.11
SNORA48.10-201ENST00000516965 ARXQ96QS3 562 aa8.1□□□□□ -1.11
SNORA48.10-201ENST00000516965 ZMYND15Q9H091 742 aa8.1□□□□□ -1.11
SNORA48.10-201ENST00000516965 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
SNORA48.10-201ENST00000516965 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
SNORA48.10-201ENST00000516965 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
SNORA48.10-201ENST00000516965 ANKK1Q8NFD2 765 aa8.09□□□□□ -1.11
SNORA48.10-201ENST00000516965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.08□□□□□ -1.12
SNORA48.10-201ENST00000516965 SKIV2LQ15477 1246 aaKnown RBP8.08□□□□□ -1.12
SNORA48.10-201ENST00000516965 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
SNORA48.10-201ENST00000516965 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
SNORA48.10-201ENST00000516965 ZFRQ96KR1 1074 aaKnown RBP8.07□□□□□ -1.12
SNORA48.10-201ENST00000516965 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
SNORA48.10-201ENST00000516965 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
SNORA48.10-201ENST00000516965 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
SNORA48.10-201ENST00000516965 TATDN2Q93075 761 aa8.06□□□□□ -1.12
SNORA48.10-201ENST00000516965 RCCD1A6NED2 376 aa8.05□□□□□ -1.12
SNORA48.10-201ENST00000516965 FAM198AQ9UFP1 575 aa8.05□□□□□ -1.12
SNORA48.10-201ENST00000516965 HDGFP51858 240 aaKnown RBP8.04□□□□□ -1.12
SNORA48.10-201ENST00000516965 PTPN5P54829 565 aa8.04□□□□□ -1.12
SNORA48.10-201ENST00000516965 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
SNORA48.10-201ENST00000516965 EYA1Q99502 592 aa8.04□□□□□ -1.12
SNORA48.10-201ENST00000516965 SOWAHBA6NEL2 793 aa8.03□□□□□ -1.12
SNORA48.10-201ENST00000516965 SMAPO00193 183 aa8.03□□□□□ -1.12
SNORA48.10-201ENST00000516965 DNAJB2P25686 324 aa8.03□□□□□ -1.12
SNORA48.10-201ENST00000516965 SULF1Q8IWU6 871 aa8.03□□□□□ -1.12
SNORA48.10-201ENST00000516965 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
SNORA48.10-201ENST00000516965 POLR3EQ9NVU0 708 aa8.03□□□□□ -1.12
SNORA48.10-201ENST00000516965 MYSM1Q5VVJ2 828 aa8.02□□□□□ -1.13
SNORA48.10-201ENST00000516965 TBC1D2Q9BYX2 928 aa8.02□□□□□ -1.13
SNORA48.10-201ENST00000516965 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.02□□□□□ -1.13
SNORA48.10-201ENST00000516965 CLK2P49760 499 aaKnown RBP8.01□□□□□ -1.13
SNORA48.10-201ENST00000516965 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
SNORA48.10-201ENST00000516965 SLC4A3P48751 1232 aa8□□□□□ -1.13
SNORA48.10-201ENST00000516965 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
SNORA48.10-201ENST00000516965 DDX11L8A8MPP1 907 aa7.99□□□□□ -1.13
SNORA48.10-201ENST00000516965 CD46P15529 392 aa7.99□□□□□ -1.13
SNORA48.10-201ENST00000516965 BCAMP50895 628 aa7.99□□□□□ -1.13
SNORA48.10-201ENST00000516965 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
SNORA48.10-201ENST00000516965 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
SNORA48.10-201ENST00000516965 TMEM134Q9H6X4 195 aa7.99□□□□□ -1.13
SNORA48.10-201ENST00000516965 C3orf80F5H4A9 247 aa7.98□□□□□ -1.13
SNORA48.10-201ENST00000516965 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
SNORA48.10-201ENST00000516965 SAMD7Q7Z3H4 446 aa7.98□□□□□ -1.13
SNORA48.10-201ENST00000516965 NUTM1Q86Y26 1132 aa7.98□□□□□ -1.13
SNORA48.10-201ENST00000516965 TSR3Q9UJK0 312 aaKnown RBP7.98□□□□□ -1.13
SNORA48.10-201ENST00000516965 MCM6Q14566 821 aa7.97□□□□□ -1.13
SNORA48.10-201ENST00000516965 SPIRE2Q8WWL2 714 aa7.97□□□□□ -1.13
SNORA48.10-201ENST00000516965 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
SNORA48.10-201ENST00000516965 HPS5Q9UPZ3 1129 aa7.97□□□□□ -1.13
SNORA48.10-201ENST00000516965 PPP4CP60510 307 aa7.96□□□□□ -1.14
SNORA48.10-201ENST00000516965 RSPH4AQ5TD94 716 aa7.96□□□□□ -1.14
SNORA48.10-201ENST00000516965 RIC3Q7Z5B4 369 aa7.95□□□□□ -1.14
SNORA48.10-201ENST00000516965 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
SNORA48.10-201ENST00000516965 RDH13Q8NBN7 331 aa7.95□□□□□ -1.14
SNORA48.10-201ENST00000516965 A6NJR5 290 aa7.94□□□□□ -1.14
SNORA48.10-201ENST00000516965 RNF40O75150 1001 aa7.94□□□□□ -1.14
SNORA48.10-201ENST00000516965 TUSC1Q2TAM9 212 aa7.94□□□□□ -1.14
SNORA48.10-201ENST00000516965 WBP1LQ9NX94 342 aa7.94□□□□□ -1.14
SNORA48.10-201ENST00000516965 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
SNORA48.10-201ENST00000516965 LIMD1Q9UGP4 676 aa7.94□□□□□ -1.14
SNORA48.10-201ENST00000516965 SPTLC1O15269 473 aa7.93□□□□□ -1.14
SNORA48.10-201ENST00000516965 RFC5P40937 340 aa7.93□□□□□ -1.14
SNORA48.10-201ENST00000516965 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
SNORA48.10-201ENST00000516965 BANK1Q8NDB2 785 aa7.93□□□□□ -1.14
SNORA48.10-201ENST00000516965 SPDYE5A6NIY4 337 aa7.92□□□□□ -1.14
SNORA48.10-201ENST00000516965 RAD21O60216 631 aa7.92□□□□□ -1.14
SNORA48.10-201ENST00000516965 GJA5P36382 358 aa7.92□□□□□ -1.14
SNORA48.10-201ENST00000516965 TMEM259Q4ZIN3 620 aa7.92□□□□□ -1.14
SNORA48.10-201ENST00000516965 RSBN1LQ6PCB5 846 aaPredicted RBP7.92□□□□□ -1.14
SNORA48.10-201ENST00000516965 CLUAP1Q96AJ1 413 aa7.92□□□□□ -1.14
SNORA48.10-201ENST00000516965 PPP2R2DQ66LE6 453 aa7.91□□□□□ -1.14
SNORA48.10-201ENST00000516965 MOXD2PA6NHM9 499 aa7.9□□□□□ -1.14
SNORA48.10-201ENST00000516965 KDM4AO75164 1064 aa7.9□□□□□ -1.14
SNORA48.10-201ENST00000516965 USP46P62068 366 aa7.9□□□□□ -1.14
SNORA48.10-201ENST00000516965 APBB1O00213 710 aa7.89□□□□□ -1.15
SNORA48.10-201ENST00000516965 TRAK2O60296 914 aa7.89□□□□□ -1.15
SNORA48.10-201ENST00000516965 GCGRP47871 477 aa7.89□□□□□ -1.15
SNORA48.10-201ENST00000516965 CSPP1Q1MSJ5 1256 aa7.89□□□□□ -1.15
SNORA48.10-201ENST00000516965 NDUFV2P19404 249 aa7.88□□□□□ -1.15
SNORA48.10-201ENST00000516965 PRR14Q9BWN1 585 aa7.88□□□□□ -1.15
SNORA48.10-201ENST00000516965 ARID3CA6NKF2 412 aa7.87□□□□□ -1.15
SNORA48.10-201ENST00000516965 NUTM2BA6NNL0 878 aaPredicted RBP7.87□□□□□ -1.15
SNORA48.10-201ENST00000516965 NUTM2EB1AL46 878 aaPredicted RBP7.87□□□□□ -1.15
SNORA48.10-201ENST00000516965 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
SNORA48.10-201ENST00000516965 PROSER2Q86WR7 435 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms