RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 RSPH4AQ5TD94 716 aa7.52□□□□□ -1.21
RNU6-1088P-201ENST00000516850 TMEM134Q9H6X4 195 aa7.52□□□□□ -1.21
RNU6-1088P-201ENST00000516850 APLP1P51693 650 aa7.51□□□□□ -1.21
RNU6-1088P-201ENST00000516850 MTRQ99707 1265 aa7.51□□□□□ -1.21
RNU6-1088P-201ENST00000516850 KMT5BQ4FZB7 885 aa7.5□□□□□ -1.21
RNU6-1088P-201ENST00000516850 TJAP1Q5JTD0 557 aa7.5□□□□□ -1.21
RNU6-1088P-201ENST00000516850 PXYLP1Q8TE99 480 aa7.5□□□□□ -1.21
RNU6-1088P-201ENST00000516850 METTL3Q86U44 580 aaKnown RBP7.48□□□□□ -1.21
RNU6-1088P-201ENST00000516850 PCDHB3Q9Y5E6 796 aa7.48□□□□□ -1.21
RNU6-1088P-201ENST00000516850 FECHP22830 423 aa7.47□□□□□ -1.21
RNU6-1088P-201ENST00000516850 COPS2P61201 443 aa7.47□□□□□ -1.21
RNU6-1088P-201ENST00000516850 GPR37O15354 613 aa7.45□□□□□ -1.22
RNU6-1088P-201ENST00000516850 CFHP08603 1231 aa7.45□□□□□ -1.22
RNU6-1088P-201ENST00000516850 GGCXP38435 758 aa7.45□□□□□ -1.22
RNU6-1088P-201ENST00000516850 ZNF516Q92618 1163 aa7.45□□□□□ -1.22
RNU6-1088P-201ENST00000516850 DAXXQ9UER7 740 aaPredicted RBP7.45□□□□□ -1.22
RNU6-1088P-201ENST00000516850 ACTN4O43707 911 aaKnown RBP7.43□□□□□ -1.22
RNU6-1088P-201ENST00000516850 ZPR1O75312 459 aa7.43□□□□□ -1.22
RNU6-1088P-201ENST00000516850 SULF1Q8IWU6 871 aa7.43□□□□□ -1.22
RNU6-1088P-201ENST00000516850 RDH13Q8NBN7 331 aa7.43□□□□□ -1.22
RNU6-1088P-201ENST00000516850 PPP1R18Q6NYC8 613 aa7.42□□□□□ -1.22
RNU6-1088P-201ENST00000516850 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
RNU6-1088P-201ENST00000516850 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
RNU6-1088P-201ENST00000516850 DDX11L8A8MPP1 907 aa7.41□□□□□ -1.22
RNU6-1088P-201ENST00000516850 SLC10A3P09131 477 aa7.41□□□□□ -1.22
RNU6-1088P-201ENST00000516850 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
RNU6-1088P-201ENST00000516850 BLOC1S3Q6QNY0 202 aa7.41□□□□□ -1.22
RNU6-1088P-201ENST00000516850 NR1I2O75469 434 aa7.4□□□□□ -1.22
RNU6-1088P-201ENST00000516850 NKX2-3Q8TAU0 364 aa7.4□□□□□ -1.22
RNU6-1088P-201ENST00000516850 MINK1Q8N4C8 1332 aaPredicted RBP7.39□□□□□ -1.23
RNU6-1088P-201ENST00000516850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.39□□□□□ -1.23
RNU6-1088P-201ENST00000516850 IRF6O14896 467 aa7.38□□□□□ -1.23
RNU6-1088P-201ENST00000516850 KRI1Q8N9T8 703 aaKnown RBP7.38□□□□□ -1.23
RNU6-1088P-201ENST00000516850 NLRP7Q8WX94 980 aa7.38□□□□□ -1.23
RNU6-1088P-201ENST00000516850 TMUB1Q9BVT8 246 aa7.38□□□□□ -1.23
RNU6-1088P-201ENST00000516850 LMOD2Q6P5Q4 547 aa7.37□□□□□ -1.23
RNU6-1088P-201ENST00000516850 PRKD2Q9BZL6 878 aa7.37□□□□□ -1.23
RNU6-1088P-201ENST00000516850 GRIPAP1Q4V328 841 aa7.36□□□□□ -1.23
RNU6-1088P-201ENST00000516850 PHOX2BQ99453 314 aa7.36□□□□□ -1.23
RNU6-1088P-201ENST00000516850 PUS10Q3MIT2 529 aaKnown RBP7.35□□□□□ -1.23
RNU6-1088P-201ENST00000516850 SCUBE3Q8IX30 993 aa7.35□□□□□ -1.23
RNU6-1088P-201ENST00000516850 V9GY48 417 aaPredicted RBP7.35□□□□□ -1.23
RNU6-1088P-201ENST00000516850 TLL1O43897 1013 aa7.34□□□□□ -1.23
RNU6-1088P-201ENST00000516850 ATP6V1AP38606 617 aa7.34□□□□□ -1.23
RNU6-1088P-201ENST00000516850 GCGRP47871 477 aa7.34□□□□□ -1.23
RNU6-1088P-201ENST00000516850 ADH1BP00325 375 aa7.33□□□□□ -1.24
RNU6-1088P-201ENST00000516850 FUT2Q10981 343 aa7.33□□□□□ -1.24
RNU6-1088P-201ENST00000516850 CCDC102AQ96A19 550 aa7.33□□□□□ -1.24
RNU6-1088P-201ENST00000516850 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
RNU6-1088P-201ENST00000516850 LAPTM4AQ15012 233 aa7.32□□□□□ -1.24
RNU6-1088P-201ENST00000516850 SPSB2Q99619 263 aa7.32□□□□□ -1.24
RNU6-1088P-201ENST00000516850 SLC6A16Q9GZN6 736 aa7.32□□□□□ -1.24
RNU6-1088P-201ENST00000516850 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
RNU6-1088P-201ENST00000516850 S1PR4O95977 384 aa7.31□□□□□ -1.24
RNU6-1088P-201ENST00000516850 CLCN1P35523 988 aa7.31□□□□□ -1.24
RNU6-1088P-201ENST00000516850 FMNL1O95466 1100 aaPredicted RBP7.3□□□□□ -1.24
RNU6-1088P-201ENST00000516850 MORN1Q5T089 497 aa7.3□□□□□ -1.24
RNU6-1088P-201ENST00000516850 ANKLE1Q8NAG6 615 aa7.3□□□□□ -1.24
RNU6-1088P-201ENST00000516850 GPCPD1Q9NPB8 672 aa7.3□□□□□ -1.24
RNU6-1088P-201ENST00000516850 GFRA3O60609 400 aa7.29□□□□□ -1.24
RNU6-1088P-201ENST00000516850 CD46P15529 392 aa7.29□□□□□ -1.24
RNU6-1088P-201ENST00000516850 Q6ZNB5 142 aa7.29□□□□□ -1.24
RNU6-1088P-201ENST00000516850 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
RNU6-1088P-201ENST00000516850 SLC19A1P41440 591 aa7.28□□□□□ -1.24
RNU6-1088P-201ENST00000516850 BARGINQ6ZT62 677 aa7.28□□□□□ -1.24
RNU6-1088P-201ENST00000516850 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
RNU6-1088P-201ENST00000516850 SLC27A5Q9Y2P5 690 aa7.28□□□□□ -1.24
RNU6-1088P-201ENST00000516850 KDM4AO75164 1064 aa7.27□□□□□ -1.25
RNU6-1088P-201ENST00000516850 ZMYND10O75800 440 aa7.27□□□□□ -1.25
RNU6-1088P-201ENST00000516850 USP46P62068 366 aa7.26□□□□□ -1.25
RNU6-1088P-201ENST00000516850 Q3C1V9 767 aa7.26□□□□□ -1.25
RNU6-1088P-201ENST00000516850 SALL2Q9Y467 1007 aaPredicted RBP7.26□□□□□ -1.25
RNU6-1088P-201ENST00000516850 TTLL12Q14166 644 aaPredicted RBP7.25□□□□□ -1.25
RNU6-1088P-201ENST00000516850 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
RNU6-1088P-201ENST00000516850 NRG2O14511 850 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1088P-201ENST00000516850 THAP11Q96EK4 314 aa7.24□□□□□ -1.25
RNU6-1088P-201ENST00000516850 FAM217BQ9NTX9 383 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1088P-201ENST00000516850 PDZRN3Q9UPQ7 1066 aa7.24□□□□□ -1.25
RNU6-1088P-201ENST00000516850 SPRYD7Q5W111 196 aa7.23□□□□□ -1.25
RNU6-1088P-201ENST00000516850 BRICD5Q6PL45 260 aa7.23□□□□□ -1.25
RNU6-1088P-201ENST00000516850 ZNF598Q86UK7 904 aaKnown RBP7.23□□□□□ -1.25
RNU6-1088P-201ENST00000516850 ZBTB24O43167 697 aaPredicted RBP7.22□□□□□ -1.25
RNU6-1088P-201ENST00000516850 SSTR3P32745 418 aaPredicted RBP7.22□□□□□ -1.25
RNU6-1088P-201ENST00000516850 MSS51Q4VC12 460 aa7.21□□□□□ -1.26
RNU6-1088P-201ENST00000516850 ZNF697Q5TEC3 545 aa7.21□□□□□ -1.26
RNU6-1088P-201ENST00000516850 RNF19BQ6ZMZ0 732 aa7.21□□□□□ -1.26
RNU6-1088P-201ENST00000516850 LIAT1Q6ZQX7 453 aa7.21□□□□□ -1.26
RNU6-1088P-201ENST00000516850 FCF1Q9Y324 198 aaKnown RBP7.21□□□□□ -1.26
RNU6-1088P-201ENST00000516850 HOXA2O43364 376 aa7.2□□□□□ -1.26
RNU6-1088P-201ENST00000516850 CD2BP2O95400 341 aaKnown RBP7.2□□□□□ -1.26
RNU6-1088P-201ENST00000516850 FAM160A2Q8N612 972 aaPredicted RBP7.2□□□□□ -1.26
RNU6-1088P-201ENST00000516850 AK7Q96M32 723 aa7.2□□□□□ -1.26
RNU6-1088P-201ENST00000516850 USB1Q9BQ65 265 aaKnown RBP7.2□□□□□ -1.26
RNU6-1088P-201ENST00000516850 AMHR2Q16671 573 aa7.19□□□□□ -1.26
RNU6-1088P-201ENST00000516850 RPIAP49247 311 aa7.18□□□□□ -1.26
RNU6-1088P-201ENST00000516850 TRAF7Q6Q0C0 670 aa7.18□□□□□ -1.26
RNU6-1088P-201ENST00000516850 REPIN1Q9BWE0 567 aaKnown RBP7.18□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
RNU6-1088P-201ENST00000516850 GIGYF2Q6Y7W6 1299 aaKnown RBP7.17□□□□□ -1.26
RNU6-1088P-201ENST00000516850 EMID1Q96A84 441 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms