RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 GNPATO15228 680 aa7.98□□□□□ -1.13
RNU4-49P-201ENST00000516080 FAM161AQ3B820 660 aa7.98□□□□□ -1.13
RNU4-49P-201ENST00000516080 MTRQ99707 1265 aa7.98□□□□□ -1.13
RNU4-49P-201ENST00000516080 PXYLP1Q8TE99 480 aa7.97□□□□□ -1.13
RNU4-49P-201ENST00000516080 GPR37O15354 613 aa7.96□□□□□ -1.14
RNU4-49P-201ENST00000516080 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
RNU4-49P-201ENST00000516080 METTL3Q86U44 580 aaKnown RBP7.95□□□□□ -1.14
RNU4-49P-201ENST00000516080 RSPH4AQ5TD94 716 aa7.94□□□□□ -1.14
RNU4-49P-201ENST00000516080 FECHP22830 423 aa7.93□□□□□ -1.14
RNU4-49P-201ENST00000516080 KMT5BQ4FZB7 885 aa7.93□□□□□ -1.14
RNU4-49P-201ENST00000516080 ZNF516Q92618 1163 aa7.92□□□□□ -1.14
RNU4-49P-201ENST00000516080 PCDHB3Q9Y5E6 796 aa7.92□□□□□ -1.14
RNU4-49P-201ENST00000516080 COPS2P61201 443 aa7.91□□□□□ -1.14
RNU4-49P-201ENST00000516080 ACTN4O43707 911 aaKnown RBP7.9□□□□□ -1.14
RNU4-49P-201ENST00000516080 CFHP08603 1231 aa7.9□□□□□ -1.14
RNU4-49P-201ENST00000516080 ZPR1O75312 459 aa7.89□□□□□ -1.15
RNU4-49P-201ENST00000516080 SLC10A3P09131 477 aa7.89□□□□□ -1.15
RNU4-49P-201ENST00000516080 DAXXQ9UER7 740 aaPredicted RBP7.89□□□□□ -1.15
RNU4-49P-201ENST00000516080 GGCXP38435 758 aa7.88□□□□□ -1.15
RNU4-49P-201ENST00000516080 PPP1R18Q6NYC8 613 aa7.88□□□□□ -1.15
RNU4-49P-201ENST00000516080 IRX2Q9BZI1 471 aaPredicted RBP7.88□□□□□ -1.15
RNU4-49P-201ENST00000516080 BLOC1S3Q6QNY0 202 aa7.87□□□□□ -1.15
RNU4-49P-201ENST00000516080 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
RNU4-49P-201ENST00000516080 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
RNU4-49P-201ENST00000516080 TMUB1Q9BVT8 246 aa7.86□□□□□ -1.15
RNU4-49P-201ENST00000516080 NR1I2O75469 434 aa7.85□□□□□ -1.15
RNU4-49P-201ENST00000516080 MAP2K5Q13163 448 aa7.85□□□□□ -1.15
RNU4-49P-201ENST00000516080 SULF1Q8IWU6 871 aa7.85□□□□□ -1.15
RNU4-49P-201ENST00000516080 RDH13Q8NBN7 331 aa7.84□□□□□ -1.15
RNU4-49P-201ENST00000516080 MINK1Q8N4C8 1332 aaPredicted RBP7.83□□□□□ -1.16
RNU4-49P-201ENST00000516080 DDX11L8A8MPP1 907 aa7.83□□□□□ -1.16
RNU4-49P-201ENST00000516080 PHOX2BQ99453 314 aa7.83□□□□□ -1.16
RNU4-49P-201ENST00000516080 PRKD2Q9BZL6 878 aa7.83□□□□□ -1.16
RNU4-49P-201ENST00000516080 V9GY48 417 aaPredicted RBP7.83□□□□□ -1.16
RNU4-49P-201ENST00000516080 IRF6O14896 467 aa7.82□□□□□ -1.16
RNU4-49P-201ENST00000516080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.82□□□□□ -1.16
RNU4-49P-201ENST00000516080 NLRP7Q8WX94 980 aa7.82□□□□□ -1.16
RNU4-49P-201ENST00000516080 SCUBE3Q8IX30 993 aa7.8□□□□□ -1.16
RNU4-49P-201ENST00000516080 TLL1O43897 1013 aa7.79□□□□□ -1.16
RNU4-49P-201ENST00000516080 ADH1BP00325 375 aa7.79□□□□□ -1.16
RNU4-49P-201ENST00000516080 GCGRP47871 477 aa7.79□□□□□ -1.16
RNU4-49P-201ENST00000516080 LAPTM4AQ15012 233 aa7.79□□□□□ -1.16
RNU4-49P-201ENST00000516080 ATP6V1AP38606 617 aa7.78□□□□□ -1.16
RNU4-49P-201ENST00000516080 LMOD2Q6P5Q4 547 aa7.78□□□□□ -1.16
RNU4-49P-201ENST00000516080 RNF223E7ERA6 249 aa7.77□□□□□ -1.17
RNU4-49P-201ENST00000516080 FUT2Q10981 343 aa7.77□□□□□ -1.17
RNU4-49P-201ENST00000516080 PUS10Q3MIT2 529 aaKnown RBP7.77□□□□□ -1.17
RNU4-49P-201ENST00000516080 GRIPAP1Q4V328 841 aa7.76□□□□□ -1.17
RNU4-49P-201ENST00000516080 MORN1Q5T089 497 aa7.76□□□□□ -1.17
RNU4-49P-201ENST00000516080 ANKLE1Q8NAG6 615 aa7.76□□□□□ -1.17
RNU4-49P-201ENST00000516080 CCDC102AQ96A19 550 aa7.76□□□□□ -1.17
RNU4-49P-201ENST00000516080 S1PR4O95977 384 aa7.75□□□□□ -1.17
RNU4-49P-201ENST00000516080 MDM2Q00987 491 aaPredicted RBP7.75□□□□□ -1.17
RNU4-49P-201ENST00000516080 SPSB2Q99619 263 aa7.75□□□□□ -1.17
RNU4-49P-201ENST00000516080 SLC6A16Q9GZN6 736 aa7.75□□□□□ -1.17
RNU4-49P-201ENST00000516080 GFRA3O60609 400 aa7.74□□□□□ -1.17
RNU4-49P-201ENST00000516080 CD46P15529 392 aa7.74□□□□□ -1.17
RNU4-49P-201ENST00000516080 CLCN1P35523 988 aa7.74□□□□□ -1.17
RNU4-49P-201ENST00000516080 SLC19A1P41440 591 aa7.73□□□□□ -1.17
RNU4-49P-201ENST00000516080 KRI1Q8N9T8 703 aaKnown RBP7.73□□□□□ -1.17
RNU4-49P-201ENST00000516080 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
RNU4-49P-201ENST00000516080 FMNL1O95466 1100 aaPredicted RBP7.72□□□□□ -1.17
RNU4-49P-201ENST00000516080 Q6ZNB5 142 aa7.72□□□□□ -1.17
RNU4-49P-201ENST00000516080 GPCPD1Q9NPB8 672 aa7.72□□□□□ -1.17
RNU4-49P-201ENST00000516080 SLC27A5Q9Y2P5 690 aa7.72□□□□□ -1.17
RNU4-49P-201ENST00000516080 NRG2O14511 850 aaPredicted RBP7.71□□□□□ -1.18
RNU4-49P-201ENST00000516080 USP46P62068 366 aa7.71□□□□□ -1.18
RNU4-49P-201ENST00000516080 BARGINQ6ZT62 677 aa7.71□□□□□ -1.18
RNU4-49P-201ENST00000516080 THAP11Q96EK4 314 aa7.71□□□□□ -1.18
RNU4-49P-201ENST00000516080 PPEF1O14829 653 aaPredicted RBP7.7□□□□□ -1.18
RNU4-49P-201ENST00000516080 KDM4AO75164 1064 aa7.7□□□□□ -1.18
RNU4-49P-201ENST00000516080 ZMYND10O75800 440 aa7.7□□□□□ -1.18
RNU4-49P-201ENST00000516080 Q3C1V9 767 aa7.7□□□□□ -1.18
RNU4-49P-201ENST00000516080 BRICD5Q6PL45 260 aa7.69□□□□□ -1.18
RNU4-49P-201ENST00000516080 ZC3H15Q8WU90 426 aaKnown RBP7.69□□□□□ -1.18
RNU4-49P-201ENST00000516080 PDZRN3Q9UPQ7 1066 aa7.69□□□□□ -1.18
RNU4-49P-201ENST00000516080 SPRYD7Q5W111 196 aa7.68□□□□□ -1.18
RNU4-49P-201ENST00000516080 ZNF598Q86UK7 904 aaKnown RBP7.68□□□□□ -1.18
RNU4-49P-201ENST00000516080 EMID1Q96A84 441 aaPredicted RBP7.68□□□□□ -1.18
RNU4-49P-201ENST00000516080 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
RNU4-49P-201ENST00000516080 LIAT1Q6ZQX7 453 aa7.67□□□□□ -1.18
RNU4-49P-201ENST00000516080 FAM160A2Q8N612 972 aaPredicted RBP7.67□□□□□ -1.18
RNU4-49P-201ENST00000516080 MSS51Q4VC12 460 aa7.66□□□□□ -1.18
RNU4-49P-201ENST00000516080 RNF19BQ6ZMZ0 732 aa7.65□□□□□ -1.18
RNU4-49P-201ENST00000516080 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.18
RNU4-49P-201ENST00000516080 HOXA2O43364 376 aa7.64□□□□□ -1.19
RNU4-49P-201ENST00000516080 RPIAP49247 311 aa7.64□□□□□ -1.19
RNU4-49P-201ENST00000516080 AMHR2Q16671 573 aa7.64□□□□□ -1.19
RNU4-49P-201ENST00000516080 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
RNU4-49P-201ENST00000516080 ZNF697Q5TEC3 545 aa7.64□□□□□ -1.19
RNU4-49P-201ENST00000516080 FCF1Q9Y324 198 aaKnown RBP7.64□□□□□ -1.19
RNU4-49P-201ENST00000516080 PRR20EP86478 221 aa7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 PRR20CP86479 221 aa7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 PRR20DP86480 221 aa7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 PRR20BP86481 221 aa7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 PRR20AP86496 221 aa7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 TRAF7Q6Q0C0 670 aa7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 USB1Q9BQ65 265 aaKnown RBP7.63□□□□□ -1.19
RNU4-49P-201ENST00000516080 CD2BP2O95400 341 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms