RNA–Protein interactions for RNA: ENST00000515860.1

LINC00500-201, long intergenic non-protein coding RNA 500, humanhuman

TSL 4 BASIC

Gene LINC00500, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00500-201ENST00000515860 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
LINC00500-201ENST00000515860 SLC4A5Q9BY07 1137 aa11.54□□□□□ -0.56
LINC00500-201ENST00000515860 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
LINC00500-201ENST00000515860 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
LINC00500-201ENST00000515860 RCCD1A6NED2 376 aa11.52□□□□□ -0.57
LINC00500-201ENST00000515860 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
LINC00500-201ENST00000515860 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
LINC00500-201ENST00000515860 KIAA1468Q9P260 1216 aa11.52□□□□□ -0.57
LINC00500-201ENST00000515860 DNAJB2P25686 324 aa11.51□□□□□ -0.57
LINC00500-201ENST00000515860 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
LINC00500-201ENST00000515860 SMAPO00193 183 aa11.49□□□□□ -0.57
LINC00500-201ENST00000515860 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
LINC00500-201ENST00000515860 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
LINC00500-201ENST00000515860 PTPN5P54829 565 aa11.46□□□□□ -0.57
LINC00500-201ENST00000515860 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
LINC00500-201ENST00000515860 GOPCQ9HD26 462 aa11.44□□□□□ -0.58
LINC00500-201ENST00000515860 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
LINC00500-201ENST00000515860 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
LINC00500-201ENST00000515860 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
LINC00500-201ENST00000515860 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
LINC00500-201ENST00000515860 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
LINC00500-201ENST00000515860 RSPH6AQ9H0K4 717 aa11.4□□□□□ -0.58
LINC00500-201ENST00000515860 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
LINC00500-201ENST00000515860 BHMG1C9JSJ3 638 aaPredicted RBP11.39□□□□□ -0.59
LINC00500-201ENST00000515860 CD46P15529 392 aa11.39□□□□□ -0.59
LINC00500-201ENST00000515860 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
LINC00500-201ENST00000515860 LAPTM4BQ86VI4 370 aa11.39□□□□□ -0.59
LINC00500-201ENST00000515860 THSD4Q6ZMP0 1018 aa11.38□□□□□ -0.59
LINC00500-201ENST00000515860 RGS20O76081 388 aa11.37□□□□□ -0.59
LINC00500-201ENST00000515860 HDGFP51858 240 aaKnown RBP11.37□□□□□ -0.59
LINC00500-201ENST00000515860 SWT1Q5T5J6 900 aaKnown RBP11.37□□□□□ -0.59
LINC00500-201ENST00000515860 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
LINC00500-201ENST00000515860 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
LINC00500-201ENST00000515860 WNT2BQ93097 391 aa11.36□□□□□ -0.59
LINC00500-201ENST00000515860 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
LINC00500-201ENST00000515860 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
LINC00500-201ENST00000515860 PCMTD1Q96MG8 357 aaPredicted RBP11.35□□□□□ -0.59
LINC00500-201ENST00000515860 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
LINC00500-201ENST00000515860 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
LINC00500-201ENST00000515860 RDH13Q8NBN7 331 aa11.34□□□□□ -0.59
LINC00500-201ENST00000515860 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
LINC00500-201ENST00000515860 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
LINC00500-201ENST00000515860 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
LINC00500-201ENST00000515860 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
LINC00500-201ENST00000515860 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
LINC00500-201ENST00000515860 SPIRE2Q8WWL2 714 aa11.31□□□□□ -0.6
LINC00500-201ENST00000515860 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
LINC00500-201ENST00000515860 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
LINC00500-201ENST00000515860 A0A0G2JS52 829 aa11.29□□□□□ -0.6
LINC00500-201ENST00000515860 SLC10A3P09131 477 aa11.29□□□□□ -0.6
LINC00500-201ENST00000515860 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
LINC00500-201ENST00000515860 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
LINC00500-201ENST00000515860 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
LINC00500-201ENST00000515860 GCGRP47871 477 aa11.28□□□□□ -0.6
LINC00500-201ENST00000515860 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
LINC00500-201ENST00000515860 KDM4AO75164 1064 aa11.26□□□□□ -0.61
LINC00500-201ENST00000515860 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
LINC00500-201ENST00000515860 RNF40O75150 1001 aa11.25□□□□□ -0.61
LINC00500-201ENST00000515860 RIC3Q7Z5B4 369 aa11.25□□□□□ -0.61
LINC00500-201ENST00000515860 C14orf37Q86TY3 774 aa11.25□□□□□ -0.61
LINC00500-201ENST00000515860 LRCH3Q96II8 777 aa11.25□□□□□ -0.61
LINC00500-201ENST00000515860 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00500-201ENST00000515860 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
LINC00500-201ENST00000515860 GJA5P36382 358 aa11.24□□□□□ -0.61
LINC00500-201ENST00000515860 USP46P62068 366 aa11.24□□□□□ -0.61
LINC00500-201ENST00000515860 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
LINC00500-201ENST00000515860 SPTLC1O15269 473 aa11.23□□□□□ -0.61
LINC00500-201ENST00000515860 RSBN1LQ6PCB5 846 aaPredicted RBP11.23□□□□□ -0.61
LINC00500-201ENST00000515860 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
LINC00500-201ENST00000515860 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
LINC00500-201ENST00000515860 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
LINC00500-201ENST00000515860 LIMD1Q9UGP4 676 aa11.23□□□□□ -0.61
LINC00500-201ENST00000515860 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
LINC00500-201ENST00000515860 CFHP08603 1231 aa11.21□□□□□ -0.61
LINC00500-201ENST00000515860 HOXA2O43364 376 aa11.2□□□□□ -0.62
LINC00500-201ENST00000515860 NDUFV2P19404 249 aa11.2□□□□□ -0.62
LINC00500-201ENST00000515860 SOWAHBA6NEL2 793 aa11.18□□□□□ -0.62
LINC00500-201ENST00000515860 KMT5BQ4FZB7 885 aa11.18□□□□□ -0.62
LINC00500-201ENST00000515860 FUT2Q10981 343 aa11.17□□□□□ -0.62
LINC00500-201ENST00000515860 GRIPAP1Q4V328 841 aa11.17□□□□□ -0.62
LINC00500-201ENST00000515860 FLIIQ13045 1269 aa11.16□□□□□ -0.62
LINC00500-201ENST00000515860 FDX1P10109 184 aa11.15□□□□□ -0.62
LINC00500-201ENST00000515860 BCAMP50895 628 aa11.15□□□□□ -0.62
LINC00500-201ENST00000515860 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
LINC00500-201ENST00000515860 PPP2R2DQ66LE6 453 aa11.15□□□□□ -0.62
LINC00500-201ENST00000515860 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
LINC00500-201ENST00000515860 ACTN4O43707 911 aaKnown RBP11.14□□□□□ -0.63
LINC00500-201ENST00000515860 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
LINC00500-201ENST00000515860 RFC5P40937 340 aa11.14□□□□□ -0.63
LINC00500-201ENST00000515860 PPP4CP60510 307 aa11.14□□□□□ -0.63
LINC00500-201ENST00000515860 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
LINC00500-201ENST00000515860 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
LINC00500-201ENST00000515860 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
LINC00500-201ENST00000515860 PCDHB15Q9Y5E8 787 aa11.14□□□□□ -0.63
LINC00500-201ENST00000515860 LILRB3O75022 631 aa11.13□□□□□ -0.63
LINC00500-201ENST00000515860 ATP6V1AP38606 617 aa11.13□□□□□ -0.63
LINC00500-201ENST00000515860 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
LINC00500-201ENST00000515860 HLA-CQ95604 372 aa11.13□□□□□ -0.63
LINC00500-201ENST00000515860 QPCTQ16769 361 aa11.12□□□□□ -0.63
LINC00500-201ENST00000515860 FBXO31Q5XUX0 539 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms