RNA–Protein interactions for RNA: ENST00000515140.1

CENPC-207, Transcript of centromere protein C, humanhuman

TSL 1 (best)

Gene CENPC, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-207ENST00000515140 GNPATO15228 680 aa11.28□□□□□ -0.6
CENPC-207ENST00000515140 RBM26Q5T8P6 1007 aaKnown RBP11.28□□□□□ -0.6
CENPC-207ENST00000515140 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
CENPC-207ENST00000515140 KMT5BQ4FZB7 885 aa11.25□□□□□ -0.61
CENPC-207ENST00000515140 GPR37O15354 613 aa11.24□□□□□ -0.61
CENPC-207ENST00000515140 RSPH4AQ5TD94 716 aa11.23□□□□□ -0.61
CENPC-207ENST00000515140 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
CENPC-207ENST00000515140 GPIHBP1Q8IV16 184 aa11.23□□□□□ -0.61
CENPC-207ENST00000515140 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
CENPC-207ENST00000515140 GGCXP38435 758 aa11.2□□□□□ -0.62
CENPC-207ENST00000515140 IRX2Q9BZI1 471 aaPredicted RBP11.2□□□□□ -0.62
CENPC-207ENST00000515140 ACTN4O43707 911 aaKnown RBP11.19□□□□□ -0.62
CENPC-207ENST00000515140 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
CENPC-207ENST00000515140 ZPR1O75312 459 aa11.17□□□□□ -0.62
CENPC-207ENST00000515140 CFHP08603 1231 aa11.17□□□□□ -0.62
CENPC-207ENST00000515140 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
CENPC-207ENST00000515140 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
CENPC-207ENST00000515140 COPS2P61201 443 aa11.16□□□□□ -0.62
CENPC-207ENST00000515140 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
CENPC-207ENST00000515140 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CENPC-207ENST00000515140 PPP1R18Q6NYC8 613 aa11.14□□□□□ -0.63
CENPC-207ENST00000515140 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
CENPC-207ENST00000515140 SLC10A3P09131 477 aa11.13□□□□□ -0.63
CENPC-207ENST00000515140 SULF1Q8IWU6 871 aa11.13□□□□□ -0.63
CENPC-207ENST00000515140 NR1I2O75469 434 aa11.12□□□□□ -0.63
CENPC-207ENST00000515140 FECHP22830 423 aa11.12□□□□□ -0.63
CENPC-207ENST00000515140 BLOC1S3Q6QNY0 202 aa11.12□□□□□ -0.63
CENPC-207ENST00000515140 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
CENPC-207ENST00000515140 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
CENPC-207ENST00000515140 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
CENPC-207ENST00000515140 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
CENPC-207ENST00000515140 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
CENPC-207ENST00000515140 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
CENPC-207ENST00000515140 ADH1BP00325 375 aa11.05□□□□□ -0.64
CENPC-207ENST00000515140 DDX11L8A8MPP1 907 aa11.03□□□□□ -0.64
CENPC-207ENST00000515140 IRF6O14896 467 aa11.02□□□□□ -0.65
CENPC-207ENST00000515140 ANKLE1Q8NAG6 615 aa11.02□□□□□ -0.65
CENPC-207ENST00000515140 GCGRP47871 477 aa11.01□□□□□ -0.65
CENPC-207ENST00000515140 PHOX2BQ99453 314 aa11.01□□□□□ -0.65
CENPC-207ENST00000515140 TLL1O43897 1013 aa11□□□□□ -0.65
CENPC-207ENST00000515140 ATP6V1AP38606 617 aa11□□□□□ -0.65
CENPC-207ENST00000515140 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
CENPC-207ENST00000515140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
CENPC-207ENST00000515140 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
CENPC-207ENST00000515140 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
CENPC-207ENST00000515140 MORN1Q5T089 497 aa10.98□□□□□ -0.65
CENPC-207ENST00000515140 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
CENPC-207ENST00000515140 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
CENPC-207ENST00000515140 NRG2O14511 850 aaPredicted RBP10.96□□□□□ -0.65
CENPC-207ENST00000515140 S1PR4O95977 384 aa10.96□□□□□ -0.65
CENPC-207ENST00000515140 FUT2Q10981 343 aa10.96□□□□□ -0.65
CENPC-207ENST00000515140 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
CENPC-207ENST00000515140 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
CENPC-207ENST00000515140 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
CENPC-207ENST00000515140 CCDC102AQ96A19 550 aa10.95□□□□□ -0.66
CENPC-207ENST00000515140 SPSB2Q99619 263 aa10.95□□□□□ -0.66
CENPC-207ENST00000515140 CD46P15529 392 aa10.94□□□□□ -0.66
CENPC-207ENST00000515140 SLC19A1P41440 591 aa10.94□□□□□ -0.66
CENPC-207ENST00000515140 Q6ZNB5 142 aa10.94□□□□□ -0.66
CENPC-207ENST00000515140 GFRA3O60609 400 aa10.93□□□□□ -0.66
CENPC-207ENST00000515140 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
CENPC-207ENST00000515140 CLCN1P35523 988 aa10.93□□□□□ -0.66
CENPC-207ENST00000515140 USP46P62068 366 aa10.93□□□□□ -0.66
CENPC-207ENST00000515140 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
CENPC-207ENST00000515140 Q3C1V9 767 aa10.91□□□□□ -0.66
CENPC-207ENST00000515140 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
CENPC-207ENST00000515140 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
CENPC-207ENST00000515140 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
CENPC-207ENST00000515140 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
CENPC-207ENST00000515140 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
CENPC-207ENST00000515140 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
CENPC-207ENST00000515140 KDM4AO75164 1064 aa10.88□□□□□ -0.67
CENPC-207ENST00000515140 ZNF598Q86UK7 904 aaKnown RBP10.88□□□□□ -0.67
CENPC-207ENST00000515140 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
CENPC-207ENST00000515140 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
CENPC-207ENST00000515140 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
CENPC-207ENST00000515140 PRR20EP86478 221 aa10.86□□□□□ -0.67
CENPC-207ENST00000515140 PRR20CP86479 221 aa10.86□□□□□ -0.67
CENPC-207ENST00000515140 PRR20DP86480 221 aa10.86□□□□□ -0.67
CENPC-207ENST00000515140 PRR20BP86481 221 aa10.86□□□□□ -0.67
CENPC-207ENST00000515140 PRR20AP86496 221 aa10.86□□□□□ -0.67
CENPC-207ENST00000515140 ZMYND10O75800 440 aa10.85□□□□□ -0.67
CENPC-207ENST00000515140 FAM217BQ9NTX9 383 aaPredicted RBP10.85□□□□□ -0.67
CENPC-207ENST00000515140 PPEF1O14829 653 aaPredicted RBP10.84□□□□□ -0.67
CENPC-207ENST00000515140 RPIAP49247 311 aa10.84□□□□□ -0.67
CENPC-207ENST00000515140 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
CENPC-207ENST00000515140 TRAF7Q6Q0C0 670 aa10.83□□□□□ -0.68
CENPC-207ENST00000515140 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
CENPC-207ENST00000515140 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
CENPC-207ENST00000515140 FAM160A2Q8N612 972 aaPredicted RBP10.82□□□□□ -0.68
CENPC-207ENST00000515140 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
CENPC-207ENST00000515140 AMHR2Q16671 573 aa10.81□□□□□ -0.68
CENPC-207ENST00000515140 HOXA2O43364 376 aa10.8□□□□□ -0.68
CENPC-207ENST00000515140 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
CENPC-207ENST00000515140 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
CENPC-207ENST00000515140 RNF19BQ6ZMZ0 732 aa10.79□□□□□ -0.68
CENPC-207ENST00000515140 TRIM67Q6ZTA4 783 aa10.79□□□□□ -0.68
CENPC-207ENST00000515140 MMP16P51512 607 aa10.78□□□□□ -0.68
CENPC-207ENST00000515140 NUTM1Q86Y26 1132 aa10.78□□□□□ -0.68
CENPC-207ENST00000515140 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms