RNA–Protein interactions for RNA: ENST00000514485.5

PACRGL-231, Transcript of parkin coregulated like, human

TSL 3

Gene PACRGL, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-231	ENST00000514485	NAIP	Q13075	1403 aa		32.11	■■■□□ 2.73
PACRGL-231	ENST00000514485	SLC26A8	Q96RN1	970 aa		32.11	■■■□□ 2.73
PACRGL-231	ENST00000514485	NWD1	Q149M9	1564 aa		32.11	■■■□□ 2.73
PACRGL-231	ENST00000514485	CHD2	O14647	1828 aa	Known RBP	32.1	■■■□□ 2.73
PACRGL-231	ENST00000514485	MED1	Q15648	1581 aa	Predicted RBP	32.09	■■■□□ 2.73
PACRGL-231	ENST00000514485	NUP155	O75694	1391 aa		32.08	■■■□□ 2.73
PACRGL-231	ENST00000514485	SPHKAP	Q2M3C7	1700 aa		32.08	■■■□□ 2.73
PACRGL-231	ENST00000514485	RIMS2	Q9UQ26	1411 aa		32.07	■■■□□ 2.72
PACRGL-231	ENST00000514485	HFM1	A2PYH4	1435 aa		32.04	■■■□□ 2.72
PACRGL-231	ENST00000514485	SENP3	Q9H4L4	574 aa	Predicted RBP	32.04	■■■□□ 2.72
PACRGL-231	ENST00000514485	KCNA6	P17658	529 aa		32.03	■■■□□ 2.72
PACRGL-231	ENST00000514485	PLEKHG1	Q9ULL1	1385 aa		32.02	■■■□□ 2.72
PACRGL-231	ENST00000514485	TMEM94	Q12767	1356 aa		32.01	■■■□□ 2.71
PACRGL-231	ENST00000514485	NKTR	P30414	1462 aa	Known RBP	32.01	■■■□□ 2.71
PACRGL-231	ENST00000514485	CHGA	P10645	457 aa	Known RBP	31.99	■■■□□ 2.71
PACRGL-231	ENST00000514485	BCAN	Q96GW7	911 aa		31.99	■■■□□ 2.71
PACRGL-231	ENST00000514485	PPP1R15A	O75807	674 aa	Predicted RBP	31.96	■■■□□ 2.71
PACRGL-231	ENST00000514485	RBM33	Q96EV2	1170 aa	Known RBP	31.95	■■■□□ 2.71
PACRGL-231	ENST00000514485	PROSER2	Q86WR7	435 aa	Predicted RBP	31.93	■■■□□ 2.7
PACRGL-231	ENST00000514485	ROBO1	Q9Y6N7	1651 aa		31.92	■■■□□ 2.7
PACRGL-231	ENST00000514485	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.92	■■■□□ 2.7
PACRGL-231	ENST00000514485	DIP2A	Q14689	1571 aa		31.91	■■■□□ 2.7
PACRGL-231	ENST00000514485	SOCS7	O14512	581 aa		31.91	■■■□□ 2.7
PACRGL-231	ENST00000514485	HDGF	P51858	240 aa	Known RBP	31.91	■■■□□ 2.7
PACRGL-231	ENST00000514485	ADAMTS13	Q76LX8	1427 aa		31.9	■■■□□ 2.7
PACRGL-231	ENST00000514485	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.89	■■■□□ 2.7
PACRGL-231	ENST00000514485	TRIM52	Q96A61	297 aa		31.88	■■■□□ 2.69
PACRGL-231	ENST00000514485	CLTCL1	P53675	1640 aa		31.88	■■■□□ 2.69
PACRGL-231	ENST00000514485	NRXN3	Q9Y4C0	1643 aa		31.86	■■■□□ 2.69
PACRGL-231	ENST00000514485	KIF1B	O60333	1816 aa		31.86	■■■□□ 2.69
PACRGL-231	ENST00000514485	FAM135B	Q49AJ0	1406 aa		31.85	■■■□□ 2.69
PACRGL-231	ENST00000514485	TBX22	Q9Y458	520 aa		31.84	■■■□□ 2.69
PACRGL-231	ENST00000514485	TRPM2	O94759	1503 aa		31.82	■■■□□ 2.68
PACRGL-231	ENST00000514485	MSH6	P52701	1360 aa		31.81	■■■□□ 2.68
PACRGL-231	ENST00000514485	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.78	■■■□□ 2.68
PACRGL-231	ENST00000514485	SETBP1	Q9Y6X0	1596 aa		31.77	■■■□□ 2.68
PACRGL-231	ENST00000514485	SETD5	Q9C0A6	1442 aa		31.75	■■■□□ 2.67
PACRGL-231	ENST00000514485	PIK3R4	Q99570	1358 aa		31.75	■■■□□ 2.67
PACRGL-231	ENST00000514485	PHLPP1	O60346	1717 aa		31.75	■■■□□ 2.67
PACRGL-231	ENST00000514485	XRN1	Q8IZH2	1706 aa	Known RBP	31.75	■■■□□ 2.67
PACRGL-231	ENST00000514485	NEXMIF	Q5QGS0	1516 aa		31.75	■■■□□ 2.67
PACRGL-231	ENST00000514485	PTPRU	Q92729	1446 aa		31.74	■■■□□ 2.67
PACRGL-231	ENST00000514485	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.73	■■■□□ 2.67
PACRGL-231	ENST00000514485	NCOA3	Q9Y6Q9	1424 aa		31.7	■■■□□ 2.67
PACRGL-231	ENST00000514485	ZNF326	Q5BKZ1	582 aa	Known RBP	31.7	■■■□□ 2.67
PACRGL-231	ENST00000514485	PHF23	Q9BUL5	403 aa	Predicted RBP	31.7	■■■□□ 2.67
PACRGL-231	ENST00000514485	SLAIN2	Q9P270	581 aa		31.67	■■■□□ 2.66
PACRGL-231	ENST00000514485	RAB3GAP2	Q9H2M9	1393 aa		31.67	■■■□□ 2.66
PACRGL-231	ENST00000514485	AMOTL2	Q9Y2J4	779 aa		31.65	■■■□□ 2.66
PACRGL-231	ENST00000514485	SETD1A	O15047	1707 aa	Known RBP	31.63	■■■□□ 2.65
PACRGL-231	ENST00000514485	C14orf37	Q86TY3	774 aa		31.63	■■■□□ 2.65
PACRGL-231	ENST00000514485	COL16A1	Q07092	1604 aa	Predicted RBP	31.63	■■■□□ 2.65
PACRGL-231	ENST00000514485	PPL	O60437	1756 aa		31.62	■■■□□ 2.65
PACRGL-231	ENST00000514485	FOXD1	Q16676	465 aa		31.61	■■■□□ 2.65
PACRGL-231	ENST00000514485	MET	P08581	1390 aa		31.59	■■■□□ 2.65
PACRGL-231	ENST00000514485	MPHOSPH9	Q99550	1183 aa		31.59	■■■□□ 2.65
PACRGL-231	ENST00000514485	C19orf44	Q9H6X5	657 aa		31.57	■■■□□ 2.64
PACRGL-231	ENST00000514485	NALCN	Q8IZF0	1738 aa		31.56	■■■□□ 2.64
PACRGL-231	ENST00000514485	RGS17	Q9UGC6	210 aa	Predicted RBP	31.55	■■■□□ 2.64
PACRGL-231	ENST00000514485	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.54	■■■□□ 2.64
PACRGL-231	ENST00000514485	ACIN1	Q9UKV3	1341 aa	Known RBP	31.53	■■■□□ 2.64
PACRGL-231	ENST00000514485	CADPS2	Q86UW7	1296 aa		31.53	■■■□□ 2.64
PACRGL-231	ENST00000514485	ATF3	P18847	181 aa		31.52	■■■□□ 2.64
PACRGL-231	ENST00000514485	DCC	P43146	1447 aa		31.5	■■■□□ 2.63
PACRGL-231	ENST00000514485	JCAD	Q9P266	1359 aa		31.48	■■■□□ 2.63
PACRGL-231	ENST00000514485	SHPRH	Q149N8	1683 aa		31.48	■■■□□ 2.63
PACRGL-231	ENST00000514485	IFT172	Q9UG01	1749 aa		31.46	■■■□□ 2.63
PACRGL-231	ENST00000514485	NHSL1	Q5SYE7	1610 aa		31.45	■■■□□ 2.62
PACRGL-231	ENST00000514485	MST1R	Q04912	1400 aa		31.43	■■■□□ 2.62
PACRGL-231	ENST00000514485	ADGRL3	Q9HAR2	1447 aa		31.43	■■■□□ 2.62
PACRGL-231	ENST00000514485	ASXL1	Q8IXJ9	1541 aa		31.43	■■■□□ 2.62
PACRGL-231	ENST00000514485	CCDC144A	A2RUR9	1427 aa		31.41	■■■□□ 2.62
PACRGL-231	ENST00000514485	VGF	O15240	615 aa	Predicted RBP	31.41	■■■□□ 2.62
PACRGL-231	ENST00000514485	BRINP3	Q76B58	766 aa		31.41	■■■□□ 2.62
PACRGL-231	ENST00000514485	RPGRIP1L	Q68CZ1	1315 aa		31.41	■■■□□ 2.62
PACRGL-231	ENST00000514485	LRP6	O75581	1613 aa		31.39	■■■□□ 2.62
PACRGL-231	ENST00000514485	HRC	P23327	699 aa		31.39	■■■□□ 2.62
PACRGL-231	ENST00000514485	PTCH1	Q13635	1447 aa		31.38	■■■□□ 2.61
PACRGL-231	ENST00000514485	POTEA	Q6S8J7	498 aa		31.36	■■■□□ 2.61
PACRGL-231	ENST00000514485	SPATA31E1	Q6ZUB1	1445 aa		31.34	■■■□□ 2.61
PACRGL-231	ENST00000514485	ROBO2	Q9HCK4	1378 aa		31.34	■■■□□ 2.61
PACRGL-231	ENST00000514485	PRAG1	Q86YV5	1406 aa		31.33	■■■□□ 2.61
PACRGL-231	ENST00000514485	SPATA31A6	Q5VVP1	1343 aa		31.29	■■■□□ 2.6
PACRGL-231	ENST00000514485	ADGRF5	Q8IZF2	1346 aa		31.27	■■■□□ 2.6
PACRGL-231	ENST00000514485	RGL3	Q3MIN7	710 aa		31.27	■■■□□ 2.6
PACRGL-231	ENST00000514485	LAMC1	P11047	1609 aa		31.26	■■■□□ 2.59
PACRGL-231	ENST00000514485	KNDC1	Q76NI1	1749 aa		31.25	■■■□□ 2.59
PACRGL-231	ENST00000514485	C1orf167	Q5SNV9	1468 aa		31.25	■■■□□ 2.59
PACRGL-231	ENST00000514485	DDX17	Q92841	729 aa	Known RBP	31.24	■■■□□ 2.59
PACRGL-231	ENST00000514485	ANKRD30B	Q9BXX2	1392 aa		31.23	■■■□□ 2.59
PACRGL-231	ENST00000514485	CDC42BPG	Q6DT37	1551 aa		31.19	■■■□□ 2.58
PACRGL-231	ENST00000514485	MEX3C	Q5U5Q3	659 aa	Known RBP	31.19	■■■□□ 2.58
PACRGL-231	ENST00000514485	PIK3C2G	O75747	1445 aa		31.18	■■■□□ 2.58
PACRGL-231	ENST00000514485	TRIM26	Q12899	539 aa	Predicted RBP	31.18	■■■□□ 2.58
PACRGL-231	ENST00000514485	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.15	■■■□□ 2.58
PACRGL-231	ENST00000514485	NUTM2E	B1AL46	878 aa	Predicted RBP	31.15	■■■□□ 2.58
PACRGL-231	ENST00000514485	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.15	■■■□□ 2.58
PACRGL-231	ENST00000514485	TECPR2	O15040	1411 aa		31.15	■■■□□ 2.58
PACRGL-231	ENST00000514485	LRRC59	Q96AG4	307 aa	Known RBP	31.13	■■■□□ 2.57
PACRGL-231	ENST00000514485	ORAI2	Q96SN7	254 aa		31.13	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms