RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.17
SDHA-217ENST00000514233 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.18
SDHA-217ENST00000514233 HDGFP51858 240 aaKnown RBP13.95□□□□□ -0.18
SDHA-217ENST00000514233 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
SDHA-217ENST00000514233 ROBO1Q9Y6N7 1651 aa13.94□□□□□ -0.18
SDHA-217ENST00000514233 MSH6P52701 1360 aa13.94□□□□□ -0.18
SDHA-217ENST00000514233 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
SDHA-217ENST00000514233 RIMS2Q9UQ26 1411 aa13.92□□□□□ -0.18
SDHA-217ENST00000514233 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
SDHA-217ENST00000514233 MYO5BQ9ULV0 1848 aa13.92□□□□□ -0.18
SDHA-217ENST00000514233 UNC13BO14795 1591 aa13.92□□□□□ -0.18
SDHA-217ENST00000514233 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
SDHA-217ENST00000514233 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
SDHA-217ENST00000514233 TBX22Q9Y458 520 aa13.91□□□□□ -0.18
SDHA-217ENST00000514233 CHD2O14647 1828 aaKnown RBP13.91□□□□□ -0.18
SDHA-217ENST00000514233 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
SDHA-217ENST00000514233 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
SDHA-217ENST00000514233 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
SDHA-217ENST00000514233 BCANQ96GW7 911 aa13.9□□□□□ -0.18
SDHA-217ENST00000514233 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
SDHA-217ENST00000514233 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
SDHA-217ENST00000514233 DIP2AQ14689 1571 aa13.88□□□□□ -0.19
SDHA-217ENST00000514233 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
SDHA-217ENST00000514233 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
SDHA-217ENST00000514233 JCADQ9P266 1359 aa13.86□□□□□ -0.19
SDHA-217ENST00000514233 E9PCH4 1651 aa13.86□□□□□ -0.19
SDHA-217ENST00000514233 POTEAQ6S8J7 498 aa13.86□□□□□ -0.19
SDHA-217ENST00000514233 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
SDHA-217ENST00000514233 COL16A1Q07092 1604 aaPredicted RBP13.83□□□□□ -0.2
SDHA-217ENST00000514233 CADPS2Q86UW7 1296 aa13.83□□□□□ -0.2
SDHA-217ENST00000514233 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
SDHA-217ENST00000514233 C19orf44Q9H6X5 657 aa13.83□□□□□ -0.2
SDHA-217ENST00000514233 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
SDHA-217ENST00000514233 NUP155O75694 1391 aa13.82□□□□□ -0.2
SDHA-217ENST00000514233 TRPM2O94759 1503 aa13.81□□□□□ -0.2
SDHA-217ENST00000514233 AHDC1Q5TGY3 1603 aaPredicted RBP13.81□□□□□ -0.2
SDHA-217ENST00000514233 SPATA31A6Q5VVP1 1343 aa13.81□□□□□ -0.2
SDHA-217ENST00000514233 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.8□□□□□ -0.2
SDHA-217ENST00000514233 ATF3P18847 181 aa13.79□□□□□ -0.2
SDHA-217ENST00000514233 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
SDHA-217ENST00000514233 DCCP43146 1447 aa13.79□□□□□ -0.2
SDHA-217ENST00000514233 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
SDHA-217ENST00000514233 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
SDHA-217ENST00000514233 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
SDHA-217ENST00000514233 SETBP1Q9Y6X0 1596 aa13.78□□□□□ -0.2
SDHA-217ENST00000514233 ITGAEP38570 1179 aa13.77□□□□□ -0.21
SDHA-217ENST00000514233 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
SDHA-217ENST00000514233 LRP6O75581 1613 aa13.76□□□□□ -0.21
SDHA-217ENST00000514233 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
SDHA-217ENST00000514233 NRXN3Q9Y4C0 1643 aa13.75□□□□□ -0.21
SDHA-217ENST00000514233 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
SDHA-217ENST00000514233 XRN1Q8IZH2 1706 aaKnown RBP13.75□□□□□ -0.21
SDHA-217ENST00000514233 BRINP3Q76B58 766 aa13.74□□□□□ -0.21
SDHA-217ENST00000514233 MST1RQ04912 1400 aa13.72□□□□□ -0.21
SDHA-217ENST00000514233 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
SDHA-217ENST00000514233 METP08581 1390 aa13.71□□□□□ -0.21
SDHA-217ENST00000514233 ASXL1Q8IXJ9 1541 aa13.71□□□□□ -0.21
SDHA-217ENST00000514233 MEX3CQ5U5Q3 659 aaKnown RBP13.71□□□□□ -0.21
SDHA-217ENST00000514233 SRCAPQ6ZRS2 3230 aa13.71□□□□□ -0.22
SDHA-217ENST00000514233 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
SDHA-217ENST00000514233 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
SDHA-217ENST00000514233 NEXMIFQ5QGS0 1516 aa13.69□□□□□ -0.22
SDHA-217ENST00000514233 ADGRL3Q9HAR2 1447 aa13.69□□□□□ -0.22
SDHA-217ENST00000514233 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
SDHA-217ENST00000514233 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
SDHA-217ENST00000514233 RRBP1Q9P2E9 1410 aaKnown RBP13.67□□□□□ -0.22
SDHA-217ENST00000514233 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
SDHA-217ENST00000514233 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
SDHA-217ENST00000514233 NAIPQ13075 1403 aa13.66□□□□□ -0.22
SDHA-217ENST00000514233 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
SDHA-217ENST00000514233 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
SDHA-217ENST00000514233 RXRBP28702 533 aa13.66□□□□□ -0.22
SDHA-217ENST00000514233 KIF1BO60333 1816 aa13.65□□□□□ -0.22
SDHA-217ENST00000514233 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
SDHA-217ENST00000514233 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
SDHA-217ENST00000514233 AFF2P51816 1311 aa13.64□□□□□ -0.23
SDHA-217ENST00000514233 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
SDHA-217ENST00000514233 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
SDHA-217ENST00000514233 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
SDHA-217ENST00000514233 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
SDHA-217ENST00000514233 TRIM52Q96A61 297 aa13.63□□□□□ -0.23
SDHA-217ENST00000514233 LAMC1P11047 1609 aa13.63□□□□□ -0.23
SDHA-217ENST00000514233 RPGRIP1LQ68CZ1 1315 aa13.63□□□□□ -0.23
SDHA-217ENST00000514233 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
SDHA-217ENST00000514233 PNPLA6Q8IY17 1366 aa13.62□□□□□ -0.23
SDHA-217ENST00000514233 HFM1A2PYH4 1435 aa13.61□□□□□ -0.23
SDHA-217ENST00000514233 ROBO2Q9HCK4 1378 aa13.6□□□□□ -0.23
SDHA-217ENST00000514233 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
SDHA-217ENST00000514233 EP400Q96L91 3159 aa13.59□□□□□ -0.23
SDHA-217ENST00000514233 RBM6P78332 1123 aaKnown RBP13.58□□□□□ -0.24
SDHA-217ENST00000514233 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
SDHA-217ENST00000514233 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
SDHA-217ENST00000514233 QTRT2Q9H974 415 aaKnown RBP13.57□□□□□ -0.24
SDHA-217ENST00000514233 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
SDHA-217ENST00000514233 RGS12O14924 1447 aa13.56□□□□□ -0.24
SDHA-217ENST00000514233 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
SDHA-217ENST00000514233 PPLO60437 1756 aa13.55□□□□□ -0.24
SDHA-217ENST00000514233 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
SDHA-217ENST00000514233 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
SDHA-217ENST00000514233 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms