RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
PDE4D-221ENST00000514231 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
PDE4D-221ENST00000514231 IRF6O14896 467 aa13.09□□□□□ -0.31
PDE4D-221ENST00000514231 RNF40O75150 1001 aa13.09□□□□□ -0.31
PDE4D-221ENST00000514231 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
PDE4D-221ENST00000514231 ZC3H15Q8WU90 426 aaKnown RBP13.05□□□□□ -0.32
PDE4D-221ENST00000514231 BCANQ96GW7 911 aa13.05□□□□□ -0.32
PDE4D-221ENST00000514231 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
PDE4D-221ENST00000514231 ZMYND10O75800 440 aa13.04□□□□□ -0.32
PDE4D-221ENST00000514231 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
PDE4D-221ENST00000514231 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
PDE4D-221ENST00000514231 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
PDE4D-221ENST00000514231 APLP1P51693 650 aa13.02□□□□□ -0.33
PDE4D-221ENST00000514231 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
PDE4D-221ENST00000514231 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
PDE4D-221ENST00000514231 SLC10A3P09131 477 aa12.99□□□□□ -0.33
PDE4D-221ENST00000514231 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
PDE4D-221ENST00000514231 KCNC4Q03721 635 aa12.98□□□□□ -0.33
PDE4D-221ENST00000514231 TJAP1Q5JTD0 557 aa12.97□□□□□ -0.33
PDE4D-221ENST00000514231 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
PDE4D-221ENST00000514231 NLRP7Q8WX94 980 aa12.96□□□□□ -0.33
PDE4D-221ENST00000514231 KMT5BQ4FZB7 885 aa12.94□□□□□ -0.34
PDE4D-221ENST00000514231 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
PDE4D-221ENST00000514231 MTRQ99707 1265 aa12.94□□□□□ -0.34
PDE4D-221ENST00000514231 ACTN4O43707 911 aaKnown RBP12.93□□□□□ -0.34
PDE4D-221ENST00000514231 CFHP08603 1231 aa12.93□□□□□ -0.34
PDE4D-221ENST00000514231 IL21Q9HBE4 155 aa12.93□□□□□ -0.34
PDE4D-221ENST00000514231 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
PDE4D-221ENST00000514231 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
PDE4D-221ENST00000514231 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
PDE4D-221ENST00000514231 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
PDE4D-221ENST00000514231 A0A0G2JS52 829 aa12.87□□□□□ -0.35
PDE4D-221ENST00000514231 CLCN1P35523 988 aa12.86□□□□□ -0.35
PDE4D-221ENST00000514231 GCGRP47871 477 aa12.86□□□□□ -0.35
PDE4D-221ENST00000514231 COPS2P61201 443 aa12.86□□□□□ -0.35
PDE4D-221ENST00000514231 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
PDE4D-221ENST00000514231 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
PDE4D-221ENST00000514231 GPCPD1Q9NPB8 672 aa12.86□□□□□ -0.35
PDE4D-221ENST00000514231 ZPR1O75312 459 aa12.84□□□□□ -0.35
PDE4D-221ENST00000514231 CD46P15529 392 aa12.83□□□□□ -0.36
PDE4D-221ENST00000514231 BLOC1S3Q6QNY0 202 aa12.83□□□□□ -0.36
PDE4D-221ENST00000514231 AK7Q96M32 723 aa12.83□□□□□ -0.36
PDE4D-221ENST00000514231 AMHR2Q16671 573 aa12.82□□□□□ -0.36
PDE4D-221ENST00000514231 RGS20O76081 388 aa12.8□□□□□ -0.36
PDE4D-221ENST00000514231 FAM217BQ9NTX9 383 aaPredicted RBP12.8□□□□□ -0.36
PDE4D-221ENST00000514231 TRIM66O15016 1216 aa12.79□□□□□ -0.36
PDE4D-221ENST00000514231 NR1I2O75469 434 aa12.79□□□□□ -0.36
PDE4D-221ENST00000514231 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
PDE4D-221ENST00000514231 REPIN1Q9BWE0 567 aaKnown RBP12.78□□□□□ -0.36
PDE4D-221ENST00000514231 FUT2Q10981 343 aa12.77□□□□□ -0.37
PDE4D-221ENST00000514231 SCUBE3Q8IX30 993 aa12.77□□□□□ -0.37
PDE4D-221ENST00000514231 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
PDE4D-221ENST00000514231 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
PDE4D-221ENST00000514231 MORN1Q5T089 497 aa12.76□□□□□ -0.37
PDE4D-221ENST00000514231 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
PDE4D-221ENST00000514231 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
PDE4D-221ENST00000514231 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
PDE4D-221ENST00000514231 TTLL12Q14166 644 aaPredicted RBP12.74□□□□□ -0.37
PDE4D-221ENST00000514231 KDM4AO75164 1064 aa12.73□□□□□ -0.37
PDE4D-221ENST00000514231 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
PDE4D-221ENST00000514231 USP46P62068 366 aa12.71□□□□□ -0.37
PDE4D-221ENST00000514231 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
PDE4D-221ENST00000514231 GGCXP38435 758 aa12.7□□□□□ -0.38
PDE4D-221ENST00000514231 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
PDE4D-221ENST00000514231 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
PDE4D-221ENST00000514231 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
PDE4D-221ENST00000514231 ADH1BP00325 375 aa12.68□□□□□ -0.38
PDE4D-221ENST00000514231 PDE4DQ08499 809 aa12.68□□□□□ -0.38
PDE4D-221ENST00000514231 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
PDE4D-221ENST00000514231 TLL1O43897 1013 aa12.67□□□□□ -0.38
PDE4D-221ENST00000514231 SPSB2Q99619 263 aa12.67□□□□□ -0.38
PDE4D-221ENST00000514231 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
PDE4D-221ENST00000514231 THAP11Q96EK4 314 aa12.66□□□□□ -0.38
PDE4D-221ENST00000514231 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
PDE4D-221ENST00000514231 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
PDE4D-221ENST00000514231 HOXA2O43364 376 aa12.63□□□□□ -0.39
PDE4D-221ENST00000514231 Q3C1V9 767 aa12.63□□□□□ -0.39
PDE4D-221ENST00000514231 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
PDE4D-221ENST00000514231 SLC6A16Q9GZN6 736 aa12.62□□□□□ -0.39
PDE4D-221ENST00000514231 MS4A1P11836 297 aa12.61□□□□□ -0.39
PDE4D-221ENST00000514231 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
PDE4D-221ENST00000514231 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
PDE4D-221ENST00000514231 S1PR4O95977 384 aa12.6□□□□□ -0.39
PDE4D-221ENST00000514231 DIXDC1Q155Q3 683 aa12.58□□□□□ -0.4
PDE4D-221ENST00000514231 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-221ENST00000514231 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
PDE4D-221ENST00000514231 RNF19BQ6ZMZ0 732 aa12.57□□□□□ -0.4
PDE4D-221ENST00000514231 HLA-CQ95604 372 aa12.57□□□□□ -0.4
PDE4D-221ENST00000514231 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
PDE4D-221ENST00000514231 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
PDE4D-221ENST00000514231 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
PDE4D-221ENST00000514231 MSS51Q4VC12 460 aa12.55□□□□□ -0.4
PDE4D-221ENST00000514231 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
PDE4D-221ENST00000514231 FDX1P10109 184 aa12.53□□□□□ -0.4
PDE4D-221ENST00000514231 GUCA2AQ02747 115 aa12.53□□□□□ -0.4
PDE4D-221ENST00000514231 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
PDE4D-221ENST00000514231 MOXD2PA6NHM9 499 aa12.52□□□□□ -0.41
PDE4D-221ENST00000514231 GJA5P36382 358 aa12.52□□□□□ -0.41
PDE4D-221ENST00000514231 NDUFV2P19404 249 aa12.51□□□□□ -0.41
PDE4D-221ENST00000514231 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms