RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 MS4A1P11836 297 aa4.94□□□□□ -1.62
RNF4-219ENST00000513450 DMRTA1Q5VZB9 504 aa4.94□□□□□ -1.62
RNF4-219ENST00000513450 TMEM134Q9H6X4 195 aa4.94□□□□□ -1.62
RNF4-219ENST00000513450 VPS9D1Q9Y2B5 631 aa4.94□□□□□ -1.62
RNF4-219ENST00000513450 PLEKHG3A1L390 1219 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 C3orf80F5H4A9 247 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 LAPTM4BQ86VI4 370 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 SULF1Q8IWU6 871 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 NLRP7Q8WX94 980 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 IRX2Q9BZI1 471 aaPredicted RBP4.93□□□□□ -1.62
RNF4-219ENST00000513450 GOPCQ9HD26 462 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 GTF3C3Q9Y5Q9 886 aa4.93□□□□□ -1.62
RNF4-219ENST00000513450 SMAPO00193 183 aa4.92□□□□□ -1.62
RNF4-219ENST00000513450 FAM98CQ17RN3 349 aaKnown RBP4.92□□□□□ -1.62
RNF4-219ENST00000513450 STAC3Q96MF2 364 aa4.92□□□□□ -1.62
RNF4-219ENST00000513450 NBPF3Q9H094 633 aa4.92□□□□□ -1.62
RNF4-219ENST00000513450 BHMG1C9JSJ3 638 aaPredicted RBP4.91□□□□□ -1.62
RNF4-219ENST00000513450 HDGFP51858 240 aaKnown RBP4.91□□□□□ -1.62
RNF4-219ENST00000513450 ADGRD1Q6QNK2 874 aa4.91□□□□□ -1.62
RNF4-219ENST00000513450 KCTD12Q96CX2 325 aaKnown RBP4.91□□□□□ -1.62
RNF4-219ENST00000513450 BEGAINQ9BUH8 593 aa4.91□□□□□ -1.62
RNF4-219ENST00000513450 RSPH6AQ9H0K4 717 aa4.91□□□□□ -1.62
RNF4-219ENST00000513450 CD46P15529 392 aa4.9□□□□□ -1.63
RNF4-219ENST00000513450 SLC4A3P48751 1232 aa4.9□□□□□ -1.63
RNF4-219ENST00000513450 DIXDC1Q155Q3 683 aa4.9□□□□□ -1.63
RNF4-219ENST00000513450 RSPH4AQ5TD94 716 aa4.9□□□□□ -1.63
RNF4-219ENST00000513450 SEPT9Q9UHD8 586 aaPredicted RBP4.9□□□□□ -1.63
RNF4-219ENST00000513450 SH3D19Q5HYK7 790 aa4.89□□□□□ -1.63
RNF4-219ENST00000513450 MRPL50Q8N5N7 158 aaKnown RBP4.89□□□□□ -1.63
RNF4-219ENST00000513450 DDX11L8A8MPP1 907 aa4.88□□□□□ -1.63
RNF4-219ENST00000513450 HRO43593 1189 aa4.88□□□□□ -1.63
RNF4-219ENST00000513450 SWT1Q5T5J6 900 aaKnown RBP4.88□□□□□ -1.63
RNF4-219ENST00000513450 ERICH6Q7L0X2 663 aa4.88□□□□□ -1.63
RNF4-219ENST00000513450 SLF2Q8IX21 1173 aa4.88□□□□□ -1.63
RNF4-219ENST00000513450 PTPN5P54829 565 aa4.87□□□□□ -1.63
RNF4-219ENST00000513450 SKIV2LQ15477 1246 aaKnown RBP4.87□□□□□ -1.63
RNF4-219ENST00000513450 RDH13Q8NBN7 331 aa4.87□□□□□ -1.63
RNF4-219ENST00000513450 NECTIN2Q92692 538 aa4.87□□□□□ -1.63
RNF4-219ENST00000513450 ZFRQ96KR1 1074 aaKnown RBP4.87□□□□□ -1.63
RNF4-219ENST00000513450 PCMTD1Q96MG8 357 aaPredicted RBP4.87□□□□□ -1.63
RNF4-219ENST00000513450 MYSM1Q5VVJ2 828 aa4.86□□□□□ -1.63
RNF4-219ENST00000513450 SAMD7Q7Z3H4 446 aa4.86□□□□□ -1.63
RNF4-219ENST00000513450 NUTM1Q86Y26 1132 aa4.86□□□□□ -1.63
RNF4-219ENST00000513450 TBC1D2Q9BYX2 928 aa4.86□□□□□ -1.63
RNF4-219ENST00000513450 GOLGA8CPA6NN73 597 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 RGS20O76081 388 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 GJA5P36382 358 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 GCGRP47871 477 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 USP46P62068 366 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 SPIRE2Q8WWL2 714 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 LRCH3Q96II8 777 aa4.85□□□□□ -1.63
RNF4-219ENST00000513450 KDM4AO75164 1064 aa4.84□□□□□ -1.63
RNF4-219ENST00000513450 SLC10A3P09131 477 aa4.84□□□□□ -1.63
RNF4-219ENST00000513450 CLK2P49760 499 aaKnown RBP4.84□□□□□ -1.63
RNF4-219ENST00000513450 TUSC1Q2TAM9 212 aa4.84□□□□□ -1.63
RNF4-219ENST00000513450 ANKK1Q8NFD2 765 aa4.84□□□□□ -1.63
RNF4-219ENST00000513450 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.84□□□□□ -1.63
RNF4-219ENST00000513450 SOWAHBA6NEL2 793 aa4.83□□□□□ -1.64
RNF4-219ENST00000513450 SPTLC1O15269 473 aa4.83□□□□□ -1.64
RNF4-219ENST00000513450 Q6ZNB5 142 aa4.83□□□□□ -1.64
RNF4-219ENST00000513450 RIC3Q7Z5B4 369 aa4.83□□□□□ -1.64
RNF4-219ENST00000513450 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNF4-219ENST00000513450 POLR3EQ9NVU0 708 aa4.83□□□□□ -1.64
RNF4-219ENST00000513450 RNF40O75150 1001 aa4.82□□□□□ -1.64
RNF4-219ENST00000513450 KMT5BQ4FZB7 885 aa4.82□□□□□ -1.64
RNF4-219ENST00000513450 GRIPAP1Q4V328 841 aa4.82□□□□□ -1.64
RNF4-219ENST00000513450 RSBN1LQ6PCB5 846 aaPredicted RBP4.82□□□□□ -1.64
RNF4-219ENST00000513450 PRR14Q9BWN1 585 aa4.82□□□□□ -1.64
RNF4-219ENST00000513450 MOXD2PA6NHM9 499 aa4.81□□□□□ -1.64
RNF4-219ENST00000513450 HOXA2O43364 376 aa4.81□□□□□ -1.64
RNF4-219ENST00000513450 CFHP08603 1231 aa4.81□□□□□ -1.64
RNF4-219ENST00000513450 PROCA1Q8NCQ7 364 aaPredicted RBP4.81□□□□□ -1.64
RNF4-219ENST00000513450 WNT2BQ93097 391 aa4.81□□□□□ -1.64
RNF4-219ENST00000513450 ATP1B4Q9UN42 357 aaPredicted RBP4.81□□□□□ -1.64
RNF4-219ENST00000513450 A0A0G2JS52 829 aa4.8□□□□□ -1.64
RNF4-219ENST00000513450 ACTN4O43707 911 aaKnown RBP4.8□□□□□ -1.64
RNF4-219ENST00000513450 ATP6V1AP38606 617 aa4.8□□□□□ -1.64
RNF4-219ENST00000513450 PPP4CP60510 307 aa4.8□□□□□ -1.64
RNF4-219ENST00000513450 FLIIQ13045 1269 aa4.8□□□□□ -1.64
RNF4-219ENST00000513450 PRPF38BQ5VTL8 546 aaKnown RBP4.8□□□□□ -1.64
RNF4-219ENST00000513450 LIMD1Q9UGP4 676 aa4.8□□□□□ -1.64
RNF4-219ENST00000513450 TSR3Q9UJK0 312 aaKnown RBP4.8□□□□□ -1.64
RNF4-219ENST00000513450 FDX1P10109 184 aa4.79□□□□□ -1.64
RNF4-219ENST00000513450 NDUFV2P19404 249 aa4.79□□□□□ -1.64
RNF4-219ENST00000513450 FUT2Q10981 343 aa4.79□□□□□ -1.64
RNF4-219ENST00000513450 PPP2R2DQ66LE6 453 aa4.79□□□□□ -1.64
RNF4-219ENST00000513450 C14orf37Q86TY3 774 aa4.79□□□□□ -1.64
RNF4-219ENST00000513450 HPS5Q9UPZ3 1129 aa4.79□□□□□ -1.64
RNF4-219ENST00000513450 LILRB3O75022 631 aa4.78□□□□□ -1.64
RNF4-219ENST00000513450 BCAMP50895 628 aa4.78□□□□□ -1.64
RNF4-219ENST00000513450 NYAP1Q6ZVC0 841 aa4.78□□□□□ -1.64
RNF4-219ENST00000513450 ZBTB3Q9H5J0 574 aa4.78□□□□□ -1.64
RNF4-219ENST00000513450 TIMELESSQ9UNS1 1208 aa4.78□□□□□ -1.64
RNF4-219ENST00000513450 SPDYE5A6NIY4 337 aa4.77□□□□□ -1.65
RNF4-219ENST00000513450 RFC5P40937 340 aa4.77□□□□□ -1.65
RNF4-219ENST00000513450 TMEM259Q4ZIN3 620 aa4.77□□□□□ -1.65
RNF4-219ENST00000513450 IFFO2Q5TF58 517 aa4.77□□□□□ -1.65
RNF4-219ENST00000513450 THSD4Q6ZMP0 1018 aa4.77□□□□□ -1.65
RNF4-219ENST00000513450 BANK1Q8NDB2 785 aa4.77□□□□□ -1.65
RNF4-219ENST00000513450 PCDHB15Q9Y5E8 787 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms