RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 KCNH8Q96L42 1107 aa6.4□□□□□ -1.38
SMAD5-208ENST00000513418 GPCPD1Q9NPB8 672 aa6.4□□□□□ -1.38
SMAD5-208ENST00000513418 TMEM132AQ24JP5 1023 aa6.39□□□□□ -1.39
SMAD5-208ENST00000513418 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
SMAD5-208ENST00000513418 TMEM134Q9H6X4 195 aa6.39□□□□□ -1.39
SMAD5-208ENST00000513418 TIMELESSQ9UNS1 1208 aa6.39□□□□□ -1.39
SMAD5-208ENST00000513418 BEGAINQ9BUH8 593 aa6.38□□□□□ -1.39
SMAD5-208ENST00000513418 CD46P15529 392 aa6.37□□□□□ -1.39
SMAD5-208ENST00000513418 GUCA2AQ02747 115 aa6.37□□□□□ -1.39
SMAD5-208ENST00000513418 SAMD7Q7Z3H4 446 aa6.37□□□□□ -1.39
SMAD5-208ENST00000513418 RABGEF1Q9UJ41 708 aa6.37□□□□□ -1.39
SMAD5-208ENST00000513418 DDX11L8A8MPP1 907 aa6.36□□□□□ -1.39
SMAD5-208ENST00000513418 OATP04181 439 aa6.36□□□□□ -1.39
SMAD5-208ENST00000513418 RBM46Q8TBY0 533 aaKnown RBP6.36□□□□□ -1.39
SMAD5-208ENST00000513418 LIMD1Q9UGP4 676 aa6.36□□□□□ -1.39
SMAD5-208ENST00000513418 NBPF26B4DH59 902 aa6.35□□□□□ -1.39
SMAD5-208ENST00000513418 CLCN1P35523 988 aa6.35□□□□□ -1.39
SMAD5-208ENST00000513418 MYSM1Q5VVJ2 828 aa6.35□□□□□ -1.39
SMAD5-208ENST00000513418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.34□□□□□ -1.39
SMAD5-208ENST00000513418 NDUFV2P19404 249 aa6.34□□□□□ -1.39
SMAD5-208ENST00000513418 BCAMP50895 628 aa6.34□□□□□ -1.39
SMAD5-208ENST00000513418 PACS2Q86VP3 889 aa6.34□□□□□ -1.39
SMAD5-208ENST00000513418 SPIRE2Q8WWL2 714 aa6.34□□□□□ -1.39
SMAD5-208ENST00000513418 POLR3EQ9NVU0 708 aa6.34□□□□□ -1.39
SMAD5-208ENST00000513418 DAXXQ9UER7 740 aaPredicted RBP6.34□□□□□ -1.39
SMAD5-208ENST00000513418 DNAJB2P25686 324 aa6.33□□□□□ -1.4
SMAD5-208ENST00000513418 ZFRQ96KR1 1074 aaKnown RBP6.33□□□□□ -1.4
SMAD5-208ENST00000513418 TBC1D2Q9BYX2 928 aa6.33□□□□□ -1.4
SMAD5-208ENST00000513418 PCDHGC3Q9UN70 934 aa6.33□□□□□ -1.4
SMAD5-208ENST00000513418 PCDHB15Q9Y5E8 787 aa6.33□□□□□ -1.4
SMAD5-208ENST00000513418 GTF3C3Q9Y5Q9 886 aa6.33□□□□□ -1.4
SMAD5-208ENST00000513418 MOXD2PA6NHM9 499 aa6.32□□□□□ -1.4
SMAD5-208ENST00000513418 FAM98CQ17RN3 349 aaKnown RBP6.32□□□□□ -1.4
SMAD5-208ENST00000513418 QPCTQ16769 361 aa6.31□□□□□ -1.4
SMAD5-208ENST00000513418 MRPL50Q8N5N7 158 aaKnown RBP6.31□□□□□ -1.4
SMAD5-208ENST00000513418 KCTD12Q96CX2 325 aaKnown RBP6.31□□□□□ -1.4
SMAD5-208ENST00000513418 STAC3Q96MF2 364 aa6.31□□□□□ -1.4
SMAD5-208ENST00000513418 HCSTQ9UBK5 93 aa6.31□□□□□ -1.4
SMAD5-208ENST00000513418 NBPF3Q9H094 633 aa6.3□□□□□ -1.4
SMAD5-208ENST00000513418 APLP1P51693 650 aa6.29□□□□□ -1.4
SMAD5-208ENST00000513418 THSD4Q6ZMP0 1018 aa6.29□□□□□ -1.4
SMAD5-208ENST00000513418 LAPTM4BQ86VI4 370 aa6.29□□□□□ -1.4
SMAD5-208ENST00000513418 CABLES1Q8TDN4 633 aa6.29□□□□□ -1.4
SMAD5-208ENST00000513418 SYMPKQ92797 1274 aaKnown RBP6.29□□□□□ -1.4
SMAD5-208ENST00000513418 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMAD5-208ENST00000513418 GCGRP47871 477 aa6.28□□□□□ -1.4
SMAD5-208ENST00000513418 PUS10Q3MIT2 529 aaKnown RBP6.28□□□□□ -1.4
SMAD5-208ENST00000513418 SH3D19Q5HYK7 790 aa6.28□□□□□ -1.4
SMAD5-208ENST00000513418 DDRGK1Q96HY6 314 aa6.28□□□□□ -1.4
SMAD5-208ENST00000513418 RNF40O75150 1001 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 CFHP08603 1231 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 FUT2Q10981 343 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 RDH13Q8NBN7 331 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 WNT2BQ93097 391 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 WBP1LQ9NX94 342 aa6.27□□□□□ -1.41
SMAD5-208ENST00000513418 HOXA2O43364 376 aa6.26□□□□□ -1.41
SMAD5-208ENST00000513418 RTL5Q5HYW3 569 aaPredicted RBP6.26□□□□□ -1.41
SMAD5-208ENST00000513418 RSBN1LQ6PCB5 846 aaPredicted RBP6.26□□□□□ -1.41
SMAD5-208ENST00000513418 GOLGA8CPA6NN73 597 aa6.25□□□□□ -1.41
SMAD5-208ENST00000513418 SOWAHBA6NEL2 793 aa6.24□□□□□ -1.41
SMAD5-208ENST00000513418 PTPN5P54829 565 aa6.24□□□□□ -1.41
SMAD5-208ENST00000513418 SKIV2LQ15477 1246 aaKnown RBP6.24□□□□□ -1.41
SMAD5-208ENST00000513418 HPS5Q9UPZ3 1129 aa6.24□□□□□ -1.41
SMAD5-208ENST00000513418 SPTLC1O15269 473 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 KDM4AO75164 1064 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 CLK2P49760 499 aaKnown RBP6.23□□□□□ -1.41
SMAD5-208ENST00000513418 BLOC1S3Q6QNY0 202 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 RNF19BQ6ZMZ0 732 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 RIC3Q7Z5B4 369 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 ANKK1Q8NFD2 765 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 POM121Q96HA1 1249 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 SNRKQ9NRH2 765 aa6.23□□□□□ -1.41
SMAD5-208ENST00000513418 GPR37L1O60883 481 aa6.22□□□□□ -1.41
SMAD5-208ENST00000513418 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.22□□□□□ -1.41
SMAD5-208ENST00000513418 PLA2G2EQ9NZK7 142 aa6.22□□□□□ -1.41
SMAD5-208ENST00000513418 CFAP99D6REC4 459 aa6.21□□□□□ -1.42
SMAD5-208ENST00000513418 TLL1O43897 1013 aa6.21□□□□□ -1.42
SMAD5-208ENST00000513418 MORN1Q5T089 497 aa6.21□□□□□ -1.42
SMAD5-208ENST00000513418 HMX1Q9NP08 348 aaPredicted RBP6.21□□□□□ -1.42
SMAD5-208ENST00000513418 SLC27A5Q9Y2P5 690 aa6.21□□□□□ -1.42
SMAD5-208ENST00000513418 LILRB3O75022 631 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 HRCP23327 699 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 RFC5P40937 340 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 IFFO2Q5TF58 517 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 LRCH3Q96II8 777 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 GOPCQ9HD26 462 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 PRDM9Q9NQV7 894 aa6.2□□□□□ -1.42
SMAD5-208ENST00000513418 PER1O15534 1290 aaPredicted RBP6.19□□□□□ -1.42
SMAD5-208ENST00000513418 SULF1Q8IWU6 871 aa6.19□□□□□ -1.42
SMAD5-208ENST00000513418 EPS8L1Q8TE68 723 aa6.19□□□□□ -1.42
SMAD5-208ENST00000513418 ZNF516Q92618 1163 aa6.19□□□□□ -1.42
SMAD5-208ENST00000513418 CLUAP1Q96AJ1 413 aa6.19□□□□□ -1.42
SMAD5-208ENST00000513418 FDX1P10109 184 aa6.18□□□□□ -1.42
SMAD5-208ENST00000513418 MCM6Q14566 821 aa6.18□□□□□ -1.42
SMAD5-208ENST00000513418 THAP11Q96EK4 314 aa6.18□□□□□ -1.42
SMAD5-208ENST00000513418 C1orf115Q9H7X2 142 aa6.18□□□□□ -1.42
SMAD5-208ENST00000513418 ACTN4O43707 911 aaKnown RBP6.17□□□□□ -1.42
SMAD5-208ENST00000513418 COPS2P61201 443 aa6.17□□□□□ -1.42
SMAD5-208ENST00000513418 PPP2R2DQ66LE6 453 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms