RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 TMUB1Q9BVT8 246 aa9.81□□□□□ -0.84
UBE2D3-230ENST00000510599 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
UBE2D3-230ENST00000510599 ADGRG1Q9Y653 693 aa9.8□□□□□ -0.84
UBE2D3-230ENST00000510599 KMT5BQ4FZB7 885 aa9.78□□□□□ -0.84
UBE2D3-230ENST00000510599 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
UBE2D3-230ENST00000510599 FCHSD2O94868 740 aa9.77□□□□□ -0.85
UBE2D3-230ENST00000510599 BLOC1S3Q6QNY0 202 aa9.77□□□□□ -0.85
UBE2D3-230ENST00000510599 RCCD1A6NED2 376 aa9.76□□□□□ -0.85
UBE2D3-230ENST00000510599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-230ENST00000510599 ACTN4O43707 911 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-230ENST00000510599 CFHP08603 1231 aa9.74□□□□□ -0.85
UBE2D3-230ENST00000510599 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
UBE2D3-230ENST00000510599 LCE2BO14633 110 aa9.73□□□□□ -0.85
UBE2D3-230ENST00000510599 SEMA3EO15041 775 aa9.73□□□□□ -0.85
UBE2D3-230ENST00000510599 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
UBE2D3-230ENST00000510599 TLL1O43897 1013 aa9.72□□□□□ -0.85
UBE2D3-230ENST00000510599 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
UBE2D3-230ENST00000510599 OATP04181 439 aa9.71□□□□□ -0.86
UBE2D3-230ENST00000510599 HIC1Q14526 733 aa9.69□□□□□ -0.86
UBE2D3-230ENST00000510599 PXYLP1Q8TE99 480 aa9.69□□□□□ -0.86
UBE2D3-230ENST00000510599 NR1I2O75469 434 aa9.68□□□□□ -0.86
UBE2D3-230ENST00000510599 SLC19A1P41440 591 aa9.68□□□□□ -0.86
UBE2D3-230ENST00000510599 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
UBE2D3-230ENST00000510599 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
UBE2D3-230ENST00000510599 ADH1BP00325 375 aa9.67□□□□□ -0.86
UBE2D3-230ENST00000510599 SLC10A3P09131 477 aa9.67□□□□□ -0.86
UBE2D3-230ENST00000510599 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
UBE2D3-230ENST00000510599 S1PR4O95977 384 aa9.66□□□□□ -0.86
UBE2D3-230ENST00000510599 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-230ENST00000510599 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-230ENST00000510599 SPRYD7Q5W111 196 aa9.64□□□□□ -0.87
UBE2D3-230ENST00000510599 ZNF598Q86UK7 904 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-230ENST00000510599 PPEF1O14829 653 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-230ENST00000510599 GNPATO15228 680 aa9.62□□□□□ -0.87
UBE2D3-230ENST00000510599 RBM26Q5T8P6 1007 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-230ENST00000510599 EMID1Q96A84 441 aaPredicted RBP9.62□□□□□ -0.87
UBE2D3-230ENST00000510599 SLC6A16Q9GZN6 736 aa9.62□□□□□ -0.87
UBE2D3-230ENST00000510599 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
UBE2D3-230ENST00000510599 PRR20EP86478 221 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PRR20CP86479 221 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PRR20DP86480 221 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PRR20BP86481 221 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PRR20AP86496 221 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PKDCCQ504Y2 493 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
UBE2D3-230ENST00000510599 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-230ENST00000510599 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
UBE2D3-230ENST00000510599 RDH13Q8NBN7 331 aa9.59□□□□□ -0.87
UBE2D3-230ENST00000510599 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
UBE2D3-230ENST00000510599 SPSB2Q99619 263 aa9.58□□□□□ -0.88
UBE2D3-230ENST00000510599 DAXXQ9UER7 740 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-230ENST00000510599 GPR37O15354 613 aa9.56□□□□□ -0.88
UBE2D3-230ENST00000510599 DGAT1O75907 488 aa9.56□□□□□ -0.88
UBE2D3-230ENST00000510599 FECHP22830 423 aa9.56□□□□□ -0.88
UBE2D3-230ENST00000510599 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
UBE2D3-230ENST00000510599 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
UBE2D3-230ENST00000510599 FUT2Q10981 343 aa9.53□□□□□ -0.88
UBE2D3-230ENST00000510599 PLA2G2CQ5R387 149 aa9.53□□□□□ -0.88
UBE2D3-230ENST00000510599 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 TNFRSF10AO00220 468 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 GDF9O60383 454 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 MYT1Q01538 1121 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 MORN1Q5T089 497 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
UBE2D3-230ENST00000510599 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-230ENST00000510599 LMOD2Q6P5Q4 547 aa9.5□□□□□ -0.89
UBE2D3-230ENST00000510599 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
UBE2D3-230ENST00000510599 GCGRP47871 477 aa9.49□□□□□ -0.89
UBE2D3-230ENST00000510599 NISCHQ9Y2I1 1504 aa9.48□□□□□ -0.89
UBE2D3-230ENST00000510599 RPIAP49247 311 aa9.48□□□□□ -0.89
UBE2D3-230ENST00000510599 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
UBE2D3-230ENST00000510599 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-230ENST00000510599 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
UBE2D3-230ENST00000510599 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
UBE2D3-230ENST00000510599 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-230ENST00000510599 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
UBE2D3-230ENST00000510599 FOXC1Q12948 553 aa9.46□□□□□ -0.9
UBE2D3-230ENST00000510599 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
UBE2D3-230ENST00000510599 PKD2L1Q9P0L9 805 aa9.45□□□□□ -0.9
UBE2D3-230ENST00000510599 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
UBE2D3-230ENST00000510599 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-230ENST00000510599 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
UBE2D3-230ENST00000510599 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
UBE2D3-230ENST00000510599 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-230ENST00000510599 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
UBE2D3-230ENST00000510599 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
UBE2D3-230ENST00000510599 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-230ENST00000510599 MAP2K5Q13163 448 aa9.41□□□□□ -0.9
UBE2D3-230ENST00000510599 Q3C1V9 767 aa9.41□□□□□ -0.9
UBE2D3-230ENST00000510599 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
UBE2D3-230ENST00000510599 AAASQ9NRG9 546 aa9.4□□□□□ -0.9
UBE2D3-230ENST00000510599 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
UBE2D3-230ENST00000510599 CD46P15529 392 aa9.39□□□□□ -0.91
UBE2D3-230ENST00000510599 CYP4X1Q8N118 509 aa9.39□□□□□ -0.91
UBE2D3-230ENST00000510599 CRIPAKQ8N1N5 446 aa9.38□□□□□ -0.91
UBE2D3-230ENST00000510599 TOR4AQ9NXH8 423 aa9.38□□□□□ -0.91
UBE2D3-230ENST00000510599 POTECB2RU33 542 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms