RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 POTEAQ6S8J7 498 aa16.12■□□□□ 0.17
DDX41-211ENST00000510171 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
DDX41-211ENST00000510171 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
DDX41-211ENST00000510171 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX41-211ENST00000510171 TBX22Q9Y458 520 aa16.1■□□□□ 0.17
DDX41-211ENST00000510171 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
DDX41-211ENST00000510171 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
DDX41-211ENST00000510171 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
DDX41-211ENST00000510171 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
DDX41-211ENST00000510171 ADGRB3O60242 1522 aa16.09■□□□□ 0.17
DDX41-211ENST00000510171 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.16
DDX41-211ENST00000510171 ZFYVE9O95405 1425 aa16.07■□□□□ 0.16
DDX41-211ENST00000510171 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
DDX41-211ENST00000510171 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
DDX41-211ENST00000510171 JCADQ9P266 1359 aa16.05■□□□□ 0.16
DDX41-211ENST00000510171 NUTM2DQ5VT03 806 aaPredicted RBP16.05■□□□□ 0.16
DDX41-211ENST00000510171 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
DDX41-211ENST00000510171 ROBO1Q9Y6N7 1651 aa16.03■□□□□ 0.16
DDX41-211ENST00000510171 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
DDX41-211ENST00000510171 C19orf44Q9H6X5 657 aa16.03■□□□□ 0.16
DDX41-211ENST00000510171 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
DDX41-211ENST00000510171 ATF3P18847 181 aa16.02■□□□□ 0.16
DDX41-211ENST00000510171 PIK3R4Q99570 1358 aa16■□□□□ 0.15
DDX41-211ENST00000510171 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
DDX41-211ENST00000510171 ROCK1Q13464 1354 aa15.99■□□□□ 0.15
DDX41-211ENST00000510171 SPATA31A6Q5VVP1 1343 aa15.98■□□□□ 0.15
DDX41-211ENST00000510171 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
DDX41-211ENST00000510171 ADAMTS13Q76LX8 1427 aa15.98■□□□□ 0.15
DDX41-211ENST00000510171 NUP155O75694 1391 aa15.98■□□□□ 0.15
DDX41-211ENST00000510171 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
DDX41-211ENST00000510171 ITGAEP38570 1179 aa15.96■□□□□ 0.15
DDX41-211ENST00000510171 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
DDX41-211ENST00000510171 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
DDX41-211ENST00000510171 PHLPP1O60346 1717 aa15.93■□□□□ 0.14
DDX41-211ENST00000510171 ZNF326Q5BKZ1 582 aaKnown RBP15.92■□□□□ 0.14
DDX41-211ENST00000510171 UNC13BO14795 1591 aa15.92■□□□□ 0.14
DDX41-211ENST00000510171 CHD2O14647 1828 aaKnown RBP15.91■□□□□ 0.14
DDX41-211ENST00000510171 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
DDX41-211ENST00000510171 PTPRUQ92729 1446 aa15.91■□□□□ 0.14
DDX41-211ENST00000510171 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
DDX41-211ENST00000510171 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
DDX41-211ENST00000510171 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
DDX41-211ENST00000510171 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
DDX41-211ENST00000510171 DIP2AQ14689 1571 aa15.9■□□□□ 0.14
DDX41-211ENST00000510171 RXRBP28702 533 aa15.89■□□□□ 0.13
DDX41-211ENST00000510171 LRP6O75581 1613 aa15.89■□□□□ 0.13
DDX41-211ENST00000510171 COL16A1Q07092 1604 aaPredicted RBP15.89■□□□□ 0.13
DDX41-211ENST00000510171 TRPM2O94759 1503 aa15.88■□□□□ 0.13
DDX41-211ENST00000510171 E9PCH4 1651 aa15.87■□□□□ 0.13
DDX41-211ENST00000510171 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
DDX41-211ENST00000510171 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
DDX41-211ENST00000510171 LRRC59Q96AG4 307 aaKnown RBP15.86■□□□□ 0.13
DDX41-211ENST00000510171 MYO5BQ9ULV0 1848 aa15.86■□□□□ 0.13
DDX41-211ENST00000510171 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
DDX41-211ENST00000510171 IQGAP3Q86VI3 1631 aa15.86■□□□□ 0.13
DDX41-211ENST00000510171 METP08581 1390 aa15.86■□□□□ 0.13
DDX41-211ENST00000510171 DCCP43146 1447 aa15.85■□□□□ 0.13
DDX41-211ENST00000510171 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
DDX41-211ENST00000510171 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.12
DDX41-211ENST00000510171 AFF2P51816 1311 aa15.82■□□□□ 0.12
DDX41-211ENST00000510171 MST1RQ04912 1400 aa15.82■□□□□ 0.12
DDX41-211ENST00000510171 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
DDX41-211ENST00000510171 SETBP1Q9Y6X0 1596 aa15.8■□□□□ 0.12
DDX41-211ENST00000510171 ASXL1Q8IXJ9 1541 aa15.8■□□□□ 0.12
DDX41-211ENST00000510171 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
DDX41-211ENST00000510171 VGFO15240 615 aaPredicted RBP15.79■□□□□ 0.12
DDX41-211ENST00000510171 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
DDX41-211ENST00000510171 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.12
DDX41-211ENST00000510171 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.12
DDX41-211ENST00000510171 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
DDX41-211ENST00000510171 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.12
DDX41-211ENST00000510171 NGLY1Q96IV0 654 aa15.76■□□□□ 0.11
DDX41-211ENST00000510171 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
DDX41-211ENST00000510171 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
DDX41-211ENST00000510171 ADAMTS2O95450 1211 aa15.75■□□□□ 0.11
DDX41-211ENST00000510171 NRXN3Q9Y4C0 1643 aa15.75■□□□□ 0.11
DDX41-211ENST00000510171 XRN1Q8IZH2 1706 aaKnown RBP15.74■□□□□ 0.11
DDX41-211ENST00000510171 ORAI2Q96SN7 254 aa15.74■□□□□ 0.11
DDX41-211ENST00000510171 RPGRIP1LQ68CZ1 1315 aa15.73■□□□□ 0.11
DDX41-211ENST00000510171 C1orf167Q5SNV9 1468 aa15.73■□□□□ 0.11
DDX41-211ENST00000510171 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
DDX41-211ENST00000510171 ROBO2Q9HCK4 1378 aa15.72■□□□□ 0.11
DDX41-211ENST00000510171 SOS2Q07890 1332 aaPredicted RBP15.71■□□□□ 0.11
DDX41-211ENST00000510171 NAIPQ13075 1403 aa15.71■□□□□ 0.11
DDX41-211ENST00000510171 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
DDX41-211ENST00000510171 SPHKAPQ2M3C7 1700 aa15.7■□□□□ 0.1
DDX41-211ENST00000510171 PTCH1Q13635 1447 aa15.69■□□□□ 0.1
DDX41-211ENST00000510171 USP21Q9UK80 565 aa15.69■□□□□ 0.1
DDX41-211ENST00000510171 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
DDX41-211ENST00000510171 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
DDX41-211ENST00000510171 RGS12O14924 1447 aa15.68■□□□□ 0.1
DDX41-211ENST00000510171 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
DDX41-211ENST00000510171 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
DDX41-211ENST00000510171 FNBP4Q8N3X1 1017 aaPredicted RBP15.67■□□□□ 0.1
DDX41-211ENST00000510171 NHSL1Q5SYE7 1610 aa15.67■□□□□ 0.1
DDX41-211ENST00000510171 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
DDX41-211ENST00000510171 NPHP3Q7Z494 1330 aa15.65■□□□□ 0.1
DDX41-211ENST00000510171 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
DDX41-211ENST00000510171 FOXO3O43524 673 aa15.63■□□□□ 0.09
DDX41-211ENST00000510171 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms