RNA–Protein interactions for RNA: ENST00000509469.5

PACRGL-221, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-221	ENST00000509469	NAIP	Q13075	1403 aa		33.5	■■■□□ 2.95
PACRGL-221	ENST00000509469	XIRP1	Q702N8	1843 aa	Known RBP	33.49	■■■□□ 2.95
PACRGL-221	ENST00000509469	RIMS2	Q9UQ26	1411 aa		33.49	■■■□□ 2.95
PACRGL-221	ENST00000509469	BCAN	Q96GW7	911 aa		33.45	■■■□□ 2.95
PACRGL-221	ENST00000509469	DISP3	Q9P2K9	1392 aa		33.45	■■■□□ 2.94
PACRGL-221	ENST00000509469	SPHKAP	Q2M3C7	1700 aa		33.45	■■■□□ 2.94
PACRGL-221	ENST00000509469	PPP1R15A	O75807	674 aa	Predicted RBP	33.43	■■■□□ 2.94
PACRGL-221	ENST00000509469	HSPA1L	P34931	641 aa		33.42	■■■□□ 2.94
PACRGL-221	ENST00000509469	PLEKHG1	Q9ULL1	1385 aa		33.42	■■■□□ 2.94
PACRGL-221	ENST00000509469	KCNA6	P17658	529 aa		33.39	■■■□□ 2.94
PACRGL-221	ENST00000509469	HFM1	A2PYH4	1435 aa		33.38	■■■□□ 2.93
PACRGL-221	ENST00000509469	HDGF	P51858	240 aa	Known RBP	33.38	■■■□□ 2.93
PACRGL-221	ENST00000509469	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.38	■■■□□ 2.93
PACRGL-221	ENST00000509469	NWD1	Q149M9	1564 aa		33.38	■■■□□ 2.93
PACRGL-221	ENST00000509469	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
PACRGL-221	ENST00000509469	TMEM94	Q12767	1356 aa		33.34	■■■□□ 2.93
PACRGL-221	ENST00000509469	CHD2	O14647	1828 aa	Known RBP	33.32	■■■□□ 2.92
PACRGL-221	ENST00000509469	NKTR	P30414	1462 aa	Known RBP	33.31	■■■□□ 2.92
PACRGL-221	ENST00000509469	PROSER2	Q86WR7	435 aa	Predicted RBP	33.31	■■■□□ 2.92
PACRGL-221	ENST00000509469	RBM33	Q96EV2	1170 aa	Known RBP	33.31	■■■□□ 2.92
PACRGL-221	ENST00000509469	CLTCL1	P53675	1640 aa		33.29	■■■□□ 2.92
PACRGL-221	ENST00000509469	TRIM52	Q96A61	297 aa		33.29	■■■□□ 2.92
PACRGL-221	ENST00000509469	TRPM2	O94759	1503 aa		33.27	■■■□□ 2.92
PACRGL-221	ENST00000509469	ADAMTS13	Q76LX8	1427 aa		33.27	■■■□□ 2.92
PACRGL-221	ENST00000509469	TBX22	Q9Y458	520 aa		33.25	■■■□□ 2.91
PACRGL-221	ENST00000509469	DIP2A	Q14689	1571 aa		33.24	■■■□□ 2.91
PACRGL-221	ENST00000509469	ZNF326	Q5BKZ1	582 aa	Known RBP	33.21	■■■□□ 2.91
PACRGL-221	ENST00000509469	ILDR2	Q71H61	639 aa		33.21	■■■□□ 2.91
PACRGL-221	ENST00000509469	KIF1B	O60333	1816 aa		33.19	■■■□□ 2.9
PACRGL-221	ENST00000509469	NRXN3	Q9Y4C0	1643 aa		33.17	■■■□□ 2.9
PACRGL-221	ENST00000509469	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.17	■■■□□ 2.9
PACRGL-221	ENST00000509469	MED1	Q15648	1581 aa	Predicted RBP	33.16	■■■□□ 2.9
PACRGL-221	ENST00000509469	SETBP1	Q9Y6X0	1596 aa		33.13	■■■□□ 2.89
PACRGL-221	ENST00000509469	NEXMIF	Q5QGS0	1516 aa		33.13	■■■□□ 2.89
PACRGL-221	ENST00000509469	MSH6	P52701	1360 aa		33.13	■■■□□ 2.89
PACRGL-221	ENST00000509469	PIK3R4	Q99570	1358 aa		33.12	■■■□□ 2.89
PACRGL-221	ENST00000509469	FAM135B	Q49AJ0	1406 aa		33.11	■■■□□ 2.89
PACRGL-221	ENST00000509469	ROBO1	Q9Y6N7	1651 aa		33.11	■■■□□ 2.89
PACRGL-221	ENST00000509469	PTPRU	Q92729	1446 aa		33.1	■■■□□ 2.89
PACRGL-221	ENST00000509469	FOXD1	Q16676	465 aa		33.06	■■■□□ 2.88
PACRGL-221	ENST00000509469	AMOTL2	Q9Y2J4	779 aa		33.05	■■■□□ 2.88
PACRGL-221	ENST00000509469	XRN1	Q8IZH2	1706 aa	Known RBP	33.03	■■■□□ 2.88
PACRGL-221	ENST00000509469	C14orf37	Q86TY3	774 aa		33.03	■■■□□ 2.88
PACRGL-221	ENST00000509469	NCOA3	Q9Y6Q9	1424 aa		33.02	■■■□□ 2.88
PACRGL-221	ENST00000509469	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33	■■■□□ 2.87
PACRGL-221	ENST00000509469	MET	P08581	1390 aa		33	■■■□□ 2.87
PACRGL-221	ENST00000509469	SLAIN2	Q9P270	581 aa		33	■■■□□ 2.87
PACRGL-221	ENST00000509469	MPHOSPH9	Q99550	1183 aa		32.96	■■■□□ 2.87
PACRGL-221	ENST00000509469	PPL	O60437	1756 aa		32.96	■■■□□ 2.87
PACRGL-221	ENST00000509469	C19orf44	Q9H6X5	657 aa		32.93	■■■□□ 2.86
PACRGL-221	ENST00000509469	SETD5	Q9C0A6	1442 aa		32.93	■■■□□ 2.86
PACRGL-221	ENST00000509469	SETD1A	O15047	1707 aa	Known RBP	32.91	■■■□□ 2.86
PACRGL-221	ENST00000509469	PHLPP1	O60346	1717 aa		32.91	■■■□□ 2.86
PACRGL-221	ENST00000509469	VGF	O15240	615 aa	Predicted RBP	32.91	■■■□□ 2.86
PACRGL-221	ENST00000509469	CCDC144A	A2RUR9	1427 aa		32.91	■■■□□ 2.86
PACRGL-221	ENST00000509469	RPGRIP1L	Q68CZ1	1315 aa		32.9	■■■□□ 2.86
PACRGL-221	ENST00000509469	ATF3	P18847	181 aa		32.89	■■■□□ 2.86
PACRGL-221	ENST00000509469	PHF23	Q9BUL5	403 aa	Predicted RBP	32.89	■■■□□ 2.86
PACRGL-221	ENST00000509469	SOCS7	O14512	581 aa		32.88	■■■□□ 2.85
PACRGL-221	ENST00000509469	CADPS2	Q86UW7	1296 aa		32.88	■■■□□ 2.85
PACRGL-221	ENST00000509469	SPATA31E1	Q6ZUB1	1445 aa		32.83	■■■□□ 2.85
PACRGL-221	ENST00000509469	RAB3GAP2	Q9H2M9	1393 aa		32.83	■■■□□ 2.85
PACRGL-221	ENST00000509469	DCC	P43146	1447 aa		32.82	■■■□□ 2.84
PACRGL-221	ENST00000509469	RGL3	Q3MIN7	710 aa		32.81	■■■□□ 2.84
PACRGL-221	ENST00000509469	NALCN	Q8IZF0	1738 aa		32.81	■■■□□ 2.84
PACRGL-221	ENST00000509469	COL16A1	Q07092	1604 aa	Predicted RBP	32.8	■■■□□ 2.84
PACRGL-221	ENST00000509469	IFT172	Q9UG01	1749 aa		32.8	■■■□□ 2.84
PACRGL-221	ENST00000509469	ACIN1	Q9UKV3	1341 aa	Known RBP	32.78	■■■□□ 2.84
PACRGL-221	ENST00000509469	ADGRL3	Q9HAR2	1447 aa		32.78	■■■□□ 2.84
PACRGL-221	ENST00000509469	ADGRF5	Q8IZF2	1346 aa		32.76	■■■□□ 2.83
PACRGL-221	ENST00000509469	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.75	■■■□□ 2.83
PACRGL-221	ENST00000509469	MST1R	Q04912	1400 aa		32.75	■■■□□ 2.83
PACRGL-221	ENST00000509469	PTCH1	Q13635	1447 aa		32.75	■■■□□ 2.83
PACRGL-221	ENST00000509469	ROBO2	Q9HCK4	1378 aa		32.74	■■■□□ 2.83
PACRGL-221	ENST00000509469	BRINP3	Q76B58	766 aa		32.73	■■■□□ 2.83
PACRGL-221	ENST00000509469	JCAD	Q9P266	1359 aa		32.72	■■■□□ 2.83
PACRGL-221	ENST00000509469	ANKRD30B	Q9BXX2	1392 aa		32.7	■■■□□ 2.83
PACRGL-221	ENST00000509469	ASXL1	Q8IXJ9	1541 aa		32.7	■■■□□ 2.83
PACRGL-221	ENST00000509469	RGS17	Q9UGC6	210 aa	Predicted RBP	32.69	■■■□□ 2.82
PACRGL-221	ENST00000509469	PRAG1	Q86YV5	1406 aa		32.68	■■■□□ 2.82
PACRGL-221	ENST00000509469	NHSL1	Q5SYE7	1610 aa		32.63	■■■□□ 2.81
PACRGL-221	ENST00000509469	PIK3C2G	O75747	1445 aa		32.62	■■■□□ 2.81
PACRGL-221	ENST00000509469	SHPRH	Q149N8	1683 aa		32.62	■■■□□ 2.81
PACRGL-221	ENST00000509469	STK26	Q9P289	416 aa		32.58	■■■□□ 2.81
PACRGL-221	ENST00000509469	C1orf167	Q5SNV9	1468 aa		32.58	■■■□□ 2.81
PACRGL-221	ENST00000509469	TMEM132E	Q6IEE7	984 aa		32.57	■■■□□ 2.8
PACRGL-221	ENST00000509469	LRP6	O75581	1613 aa		32.57	■■■□□ 2.8
PACRGL-221	ENST00000509469	DDX17	Q92841	729 aa	Known RBP	32.56	■■■□□ 2.8
PACRGL-221	ENST00000509469	LRPPRC	P42704	1394 aa	Known RBP	32.55	■■■□□ 2.8
PACRGL-221	ENST00000509469	SPATA31A6	Q5VVP1	1343 aa		32.54	■■■□□ 2.8
PACRGL-221	ENST00000509469	KNDC1	Q76NI1	1749 aa		32.54	■■■□□ 2.8
PACRGL-221	ENST00000509469	TECPR2	O15040	1411 aa		32.53	■■■□□ 2.8
PACRGL-221	ENST00000509469	MYOM2	P54296	1465 aa		32.53	■■■□□ 2.8
PACRGL-221	ENST00000509469	NRXN1	Q9ULB1	1477 aa		32.53	■■■□□ 2.8
PACRGL-221	ENST00000509469	POTEA	Q6S8J7	498 aa		32.52	■■■□□ 2.8
PACRGL-221	ENST00000509469	CDC42BPG	Q6DT37	1551 aa		32.5	■■■□□ 2.79
PACRGL-221	ENST00000509469	WAPL	Q7Z5K2	1190 aa		32.5	■■■□□ 2.79
PACRGL-221	ENST00000509469	ABCC11	Q96J66	1382 aa		32.49	■■■□□ 2.79
PACRGL-221	ENST00000509469	HRC	P23327	699 aa		32.49	■■■□□ 2.79
PACRGL-221	ENST00000509469	ORAI2	Q96SN7	254 aa		32.49	■■■□□ 2.79

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