RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
KDM3B-206ENST00000509468 E9PCH4 1651 aa19.21■□□□□ 0.67
KDM3B-206ENST00000509468 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
KDM3B-206ENST00000509468 PROSER2Q86WR7 435 aaPredicted RBP19.21■□□□□ 0.67
KDM3B-206ENST00000509468 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
KDM3B-206ENST00000509468 SOCS7O14512 581 aa19.2■□□□□ 0.66
KDM3B-206ENST00000509468 TMEM131LA2VDJ0 1609 aa19.2■□□□□ 0.66
KDM3B-206ENST00000509468 XIRP1Q702N8 1843 aaKnown RBP19.2■□□□□ 0.66
KDM3B-206ENST00000509468 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
KDM3B-206ENST00000509468 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
KDM3B-206ENST00000509468 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
KDM3B-206ENST00000509468 TBX22Q9Y458 520 aa19.16■□□□□ 0.66
KDM3B-206ENST00000509468 TMEM94Q12767 1356 aa19.16■□□□□ 0.66
KDM3B-206ENST00000509468 RRBP1Q9P2E9 1410 aaKnown RBP19.14■□□□□ 0.65
KDM3B-206ENST00000509468 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
KDM3B-206ENST00000509468 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
KDM3B-206ENST00000509468 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
KDM3B-206ENST00000509468 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
KDM3B-206ENST00000509468 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
KDM3B-206ENST00000509468 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
KDM3B-206ENST00000509468 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
KDM3B-206ENST00000509468 MSH6P52701 1360 aa19.09■□□□□ 0.65
KDM3B-206ENST00000509468 NUTM2DQ5VT03 806 aaPredicted RBP19.09■□□□□ 0.65
KDM3B-206ENST00000509468 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
KDM3B-206ENST00000509468 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
KDM3B-206ENST00000509468 PIK3R4Q99570 1358 aa19.06■□□□□ 0.64
KDM3B-206ENST00000509468 SLAIN2Q9P270 581 aa19.06■□□□□ 0.64
KDM3B-206ENST00000509468 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
KDM3B-206ENST00000509468 NAIPQ13075 1403 aa19.05■□□□□ 0.64
KDM3B-206ENST00000509468 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
KDM3B-206ENST00000509468 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
KDM3B-206ENST00000509468 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
KDM3B-206ENST00000509468 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
KDM3B-206ENST00000509468 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
KDM3B-206ENST00000509468 C19orf44Q9H6X5 657 aa19.02■□□□□ 0.64
KDM3B-206ENST00000509468 ROBO1Q9Y6N7 1651 aa19.01■□□□□ 0.63
KDM3B-206ENST00000509468 AMOTL2Q9Y2J4 779 aa19.01■□□□□ 0.63
KDM3B-206ENST00000509468 TRPM2O94759 1503 aa19■□□□□ 0.63
KDM3B-206ENST00000509468 ATF3P18847 181 aa18.99■□□□□ 0.63
KDM3B-206ENST00000509468 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
KDM3B-206ENST00000509468 KIF1BO60333 1816 aa18.99■□□□□ 0.63
KDM3B-206ENST00000509468 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
KDM3B-206ENST00000509468 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
KDM3B-206ENST00000509468 SETBP1Q9Y6X0 1596 aa18.94■□□□□ 0.62
KDM3B-206ENST00000509468 CLTCL1P53675 1640 aa18.94■□□□□ 0.62
KDM3B-206ENST00000509468 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
KDM3B-206ENST00000509468 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
KDM3B-206ENST00000509468 PTPRUQ92729 1446 aa18.92■□□□□ 0.62
KDM3B-206ENST00000509468 PHLPP1O60346 1717 aa18.92■□□□□ 0.62
KDM3B-206ENST00000509468 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
KDM3B-206ENST00000509468 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
KDM3B-206ENST00000509468 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
KDM3B-206ENST00000509468 NEXMIFQ5QGS0 1516 aa18.9■□□□□ 0.62
KDM3B-206ENST00000509468 RGS17Q9UGC6 210 aaPredicted RBP18.89■□□□□ 0.61
KDM3B-206ENST00000509468 METP08581 1390 aa18.89■□□□□ 0.61
KDM3B-206ENST00000509468 JCADQ9P266 1359 aa18.89■□□□□ 0.61
KDM3B-206ENST00000509468 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
KDM3B-206ENST00000509468 DCCP43146 1447 aa18.85■□□□□ 0.61
KDM3B-206ENST00000509468 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.6
KDM3B-206ENST00000509468 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
KDM3B-206ENST00000509468 FOXD1Q16676 465 aa18.82■□□□□ 0.6
KDM3B-206ENST00000509468 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
KDM3B-206ENST00000509468 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
KDM3B-206ENST00000509468 AHDC1Q5TGY3 1603 aaPredicted RBP18.81■□□□□ 0.6
KDM3B-206ENST00000509468 PPLO60437 1756 aa18.8■□□□□ 0.6
KDM3B-206ENST00000509468 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
KDM3B-206ENST00000509468 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
KDM3B-206ENST00000509468 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
KDM3B-206ENST00000509468 MST1RQ04912 1400 aa18.77■□□□□ 0.6
KDM3B-206ENST00000509468 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
KDM3B-206ENST00000509468 MEX3CQ5U5Q3 659 aaKnown RBP18.76■□□□□ 0.59
KDM3B-206ENST00000509468 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
KDM3B-206ENST00000509468 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
KDM3B-206ENST00000509468 SHPRHQ149N8 1683 aa18.75■□□□□ 0.59
KDM3B-206ENST00000509468 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
KDM3B-206ENST00000509468 ASXL1Q8IXJ9 1541 aa18.74■□□□□ 0.59
KDM3B-206ENST00000509468 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
KDM3B-206ENST00000509468 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
KDM3B-206ENST00000509468 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
KDM3B-206ENST00000509468 NALCNQ8IZF0 1738 aa18.73■□□□□ 0.59
KDM3B-206ENST00000509468 ROBO2Q9HCK4 1378 aa18.72■□□□□ 0.59
KDM3B-206ENST00000509468 NHSL1Q5SYE7 1610 aa18.71■□□□□ 0.59
KDM3B-206ENST00000509468 SPATA31E1Q6ZUB1 1445 aa18.71■□□□□ 0.59
KDM3B-206ENST00000509468 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
KDM3B-206ENST00000509468 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
KDM3B-206ENST00000509468 NUTM2BA6NNL0 878 aaPredicted RBP18.7■□□□□ 0.58
KDM3B-206ENST00000509468 NUTM2EB1AL46 878 aaPredicted RBP18.7■□□□□ 0.58
KDM3B-206ENST00000509468 NUTM2AQ8IVF1 878 aaPredicted RBP18.7■□□□□ 0.58
KDM3B-206ENST00000509468 C1orf167Q5SNV9 1468 aa18.69■□□□□ 0.58
KDM3B-206ENST00000509468 LRP6O75581 1613 aa18.67■□□□□ 0.58
KDM3B-206ENST00000509468 IFT172Q9UG01 1749 aa18.67■□□□□ 0.58
KDM3B-206ENST00000509468 STK26Q9P289 416 aa18.67■□□□□ 0.58
KDM3B-206ENST00000509468 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
KDM3B-206ENST00000509468 ORAI2Q96SN7 254 aa18.66■□□□□ 0.58
KDM3B-206ENST00000509468 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
KDM3B-206ENST00000509468 LRPPRCP42704 1394 aaKnown RBP18.64■□□□□ 0.57
KDM3B-206ENST00000509468 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
KDM3B-206ENST00000509468 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
KDM3B-206ENST00000509468 SIRT1Q96EB6 747 aa18.63■□□□□ 0.57
KDM3B-206ENST00000509468 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms