RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 SLC26A8Q96RN1 970 aa19.53■□□□□ 0.72
NR1I3-225ENST00000508387 RIMS2Q9UQ26 1411 aa19.52■□□□□ 0.72
NR1I3-225ENST00000508387 CHGAP10645 457 aaKnown RBP19.51■□□□□ 0.71
NR1I3-225ENST00000508387 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
NR1I3-225ENST00000508387 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
NR1I3-225ENST00000508387 CLTCL1P53675 1640 aa19.48■□□□□ 0.71
NR1I3-225ENST00000508387 TOM1O60784 492 aa19.47■□□□□ 0.71
NR1I3-225ENST00000508387 HSPA1LP34931 641 aa19.47■□□□□ 0.71
NR1I3-225ENST00000508387 RBM33Q96EV2 1170 aaKnown RBP19.47■□□□□ 0.71
NR1I3-225ENST00000508387 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
NR1I3-225ENST00000508387 PLEKHG1Q9ULL1 1385 aa19.46■□□□□ 0.71
NR1I3-225ENST00000508387 DISP3Q9P2K9 1392 aa19.45■□□□□ 0.7
NR1I3-225ENST00000508387 BCANQ96GW7 911 aa19.44■□□□□ 0.7
NR1I3-225ENST00000508387 TMEM94Q12767 1356 aa19.44■□□□□ 0.7
NR1I3-225ENST00000508387 TRPM2O94759 1503 aa19.43■□□□□ 0.7
NR1I3-225ENST00000508387 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
NR1I3-225ENST00000508387 CHD2O14647 1828 aaKnown RBP19.43■□□□□ 0.7
NR1I3-225ENST00000508387 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
NR1I3-225ENST00000508387 NRXN3Q9Y4C0 1643 aa19.42■□□□□ 0.7
NR1I3-225ENST00000508387 KCNA6P17658 529 aa19.41■□□□□ 0.7
NR1I3-225ENST00000508387 NKTRP30414 1462 aaKnown RBP19.41■□□□□ 0.7
NR1I3-225ENST00000508387 ILDR2Q71H61 639 aa19.39■□□□□ 0.69
NR1I3-225ENST00000508387 TRIM52Q96A61 297 aa19.38■□□□□ 0.69
NR1I3-225ENST00000508387 DIP2AQ14689 1571 aa19.37■□□□□ 0.69
NR1I3-225ENST00000508387 NEXMIFQ5QGS0 1516 aa19.37■□□□□ 0.69
NR1I3-225ENST00000508387 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
NR1I3-225ENST00000508387 PROSER2Q86WR7 435 aaPredicted RBP19.36■□□□□ 0.69
NR1I3-225ENST00000508387 KIF1BO60333 1816 aa19.35■□□□□ 0.69
NR1I3-225ENST00000508387 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.69
NR1I3-225ENST00000508387 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
NR1I3-225ENST00000508387 ROBO1Q9Y6N7 1651 aa19.33■□□□□ 0.69
NR1I3-225ENST00000508387 SETBP1Q9Y6X0 1596 aa19.33■□□□□ 0.69
NR1I3-225ENST00000508387 HDGFP51858 240 aaKnown RBP19.32■□□□□ 0.68
NR1I3-225ENST00000508387 FOXD1Q16676 465 aa19.32■□□□□ 0.68
NR1I3-225ENST00000508387 ZNF326Q5BKZ1 582 aaKnown RBP19.32■□□□□ 0.68
NR1I3-225ENST00000508387 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
NR1I3-225ENST00000508387 XRN1Q8IZH2 1706 aaKnown RBP19.31■□□□□ 0.68
NR1I3-225ENST00000508387 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
NR1I3-225ENST00000508387 SETD1AO15047 1707 aaKnown RBP19.27■□□□□ 0.68
NR1I3-225ENST00000508387 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
NR1I3-225ENST00000508387 METP08581 1390 aa19.27■□□□□ 0.68
NR1I3-225ENST00000508387 MSH6P52701 1360 aa19.27■□□□□ 0.68
NR1I3-225ENST00000508387 PPLO60437 1756 aa19.26■□□□□ 0.67
NR1I3-225ENST00000508387 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
NR1I3-225ENST00000508387 PIK3R4Q99570 1358 aa19.25■□□□□ 0.67
NR1I3-225ENST00000508387 AMOTL2Q9Y2J4 779 aa19.24■□□□□ 0.67
NR1I3-225ENST00000508387 PHLPP1O60346 1717 aa19.21■□□□□ 0.67
NR1I3-225ENST00000508387 NALCNQ8IZF0 1738 aa19.2■□□□□ 0.66
NR1I3-225ENST00000508387 C14orf37Q86TY3 774 aa19.2■□□□□ 0.66
NR1I3-225ENST00000508387 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
NR1I3-225ENST00000508387 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
NR1I3-225ENST00000508387 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
NR1I3-225ENST00000508387 NCOA3Q9Y6Q9 1424 aa19.18■□□□□ 0.66
NR1I3-225ENST00000508387 SLAIN2Q9P270 581 aa19.18■□□□□ 0.66
NR1I3-225ENST00000508387 COL16A1Q07092 1604 aaPredicted RBP19.17■□□□□ 0.66
NR1I3-225ENST00000508387 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
NR1I3-225ENST00000508387 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
NR1I3-225ENST00000508387 SPATA31E1Q6ZUB1 1445 aa19.16■□□□□ 0.66
NR1I3-225ENST00000508387 ADGRF5Q8IZF2 1346 aa19.12■□□□□ 0.65
NR1I3-225ENST00000508387 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
NR1I3-225ENST00000508387 C19orf44Q9H6X5 657 aa19.12■□□□□ 0.65
NR1I3-225ENST00000508387 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
NR1I3-225ENST00000508387 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
NR1I3-225ENST00000508387 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
NR1I3-225ENST00000508387 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
NR1I3-225ENST00000508387 MST1RQ04912 1400 aa19.1■□□□□ 0.65
NR1I3-225ENST00000508387 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
NR1I3-225ENST00000508387 RPGRIP1LQ68CZ1 1315 aa19.1■□□□□ 0.65
NR1I3-225ENST00000508387 ATF3P18847 181 aa19.1■□□□□ 0.65
NR1I3-225ENST00000508387 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
NR1I3-225ENST00000508387 DCCP43146 1447 aa19.09■□□□□ 0.65
NR1I3-225ENST00000508387 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
NR1I3-225ENST00000508387 SOCS7O14512 581 aa19.09■□□□□ 0.65
NR1I3-225ENST00000508387 CADPS2Q86UW7 1296 aa19.09■□□□□ 0.65
NR1I3-225ENST00000508387 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
NR1I3-225ENST00000508387 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
NR1I3-225ENST00000508387 BRINP3Q76B58 766 aa19.06■□□□□ 0.64
NR1I3-225ENST00000508387 LRP6O75581 1613 aa19.05■□□□□ 0.64
NR1I3-225ENST00000508387 PRAG1Q86YV5 1406 aa19.05■□□□□ 0.64
NR1I3-225ENST00000508387 PIK3C2GO75747 1445 aa19.04■□□□□ 0.64
NR1I3-225ENST00000508387 DDX17Q92841 729 aaKnown RBP19.03■□□□□ 0.64
NR1I3-225ENST00000508387 SHPRHQ149N8 1683 aa19.03■□□□□ 0.64
NR1I3-225ENST00000508387 JCADQ9P266 1359 aa19.03■□□□□ 0.64
NR1I3-225ENST00000508387 KNDC1Q76NI1 1749 aa19.02■□□□□ 0.63
NR1I3-225ENST00000508387 ANKRD30BQ9BXX2 1392 aa19.01■□□□□ 0.63
NR1I3-225ENST00000508387 TMEM132EQ6IEE7 984 aa19■□□□□ 0.63
NR1I3-225ENST00000508387 C1orf167Q5SNV9 1468 aa19■□□□□ 0.63
NR1I3-225ENST00000508387 NRXN1Q9ULB1 1477 aa18.99■□□□□ 0.63
NR1I3-225ENST00000508387 MYOM2P54296 1465 aa18.98■□□□□ 0.63
NR1I3-225ENST00000508387 PLEKHH1Q9ULM0 1364 aa18.98■□□□□ 0.63
NR1I3-225ENST00000508387 STK26Q9P289 416 aa18.98■□□□□ 0.63
NR1I3-225ENST00000508387 CDC42BPGQ6DT37 1551 aa18.97■□□□□ 0.63
NR1I3-225ENST00000508387 POTEAQ6S8J7 498 aa18.96■□□□□ 0.63
NR1I3-225ENST00000508387 TECPR2O15040 1411 aa18.96■□□□□ 0.63
NR1I3-225ENST00000508387 LRPPRCP42704 1394 aaKnown RBP18.95■□□□□ 0.62
NR1I3-225ENST00000508387 WAPLQ7Z5K2 1190 aa18.95■□□□□ 0.62
NR1I3-225ENST00000508387 YTHDC2Q9H6S0 1430 aaKnown RBP18.94■□□□□ 0.62
NR1I3-225ENST00000508387 LAMC1P11047 1609 aa18.94■□□□□ 0.62
NR1I3-225ENST00000508387 ORAI2Q96SN7 254 aa18.94■□□□□ 0.62
NR1I3-225ENST00000508387 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms