RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 HDGFP51858 240 aaKnown RBP31.71■■■□□ 2.67
CLDND1-216ENST00000507944 CHGAP10645 457 aaKnown RBP31.69■■■□□ 2.66
CLDND1-216ENST00000507944 TMEM131LA2VDJ0 1609 aa31.67■■■□□ 2.66
CLDND1-216ENST00000507944 ZFYVE9O95405 1425 aa31.67■■■□□ 2.66
CLDND1-216ENST00000507944 RRBP1Q9P2E9 1410 aaKnown RBP31.67■■■□□ 2.66
CLDND1-216ENST00000507944 RIMS2Q9UQ26 1411 aa31.66■■■□□ 2.66
CLDND1-216ENST00000507944 XIRP1Q702N8 1843 aaKnown RBP31.66■■■□□ 2.66
CLDND1-216ENST00000507944 PPP1R15AO75807 674 aaPredicted RBP31.66■■■□□ 2.66
CLDND1-216ENST00000507944 SENP3Q9H4L4 574 aaPredicted RBP31.65■■■□□ 2.66
CLDND1-216ENST00000507944 PLEKHG1Q9ULL1 1385 aa31.63■■■□□ 2.65
CLDND1-216ENST00000507944 PROSER2Q86WR7 435 aaPredicted RBP31.62■■■□□ 2.65
CLDND1-216ENST00000507944 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.62■■■□□ 2.65
CLDND1-216ENST00000507944 TMEM94Q12767 1356 aa31.61■■■□□ 2.65
CLDND1-216ENST00000507944 NUTM2DQ5VT03 806 aaPredicted RBP31.56■■■□□ 2.64
CLDND1-216ENST00000507944 RBM33Q96EV2 1170 aaKnown RBP31.56■■■□□ 2.64
CLDND1-216ENST00000507944 TBX22Q9Y458 520 aa31.54■■■□□ 2.64
CLDND1-216ENST00000507944 NWD1Q149M9 1564 aa31.53■■■□□ 2.64
CLDND1-216ENST00000507944 NKTRP30414 1462 aaKnown RBP31.52■■■□□ 2.64
CLDND1-216ENST00000507944 NAIPQ13075 1403 aa31.52■■■□□ 2.64
CLDND1-216ENST00000507944 CHD2O14647 1828 aaKnown RBP31.5■■■□□ 2.63
CLDND1-216ENST00000507944 SOCS7O14512 581 aa31.49■■■□□ 2.63
CLDND1-216ENST00000507944 MED1Q15648 1581 aaPredicted RBP31.48■■■□□ 2.63
CLDND1-216ENST00000507944 SPHKAPQ2M3C7 1700 aa31.48■■■□□ 2.63
CLDND1-216ENST00000507944 FAM135BQ49AJ0 1406 aa31.47■■■□□ 2.63
CLDND1-216ENST00000507944 ADAMTS13Q76LX8 1427 aa31.46■■■□□ 2.63
CLDND1-216ENST00000507944 MSH6P52701 1360 aa31.43■■■□□ 2.62
CLDND1-216ENST00000507944 ZNF326Q5BKZ1 582 aaKnown RBP31.41■■■□□ 2.62
CLDND1-216ENST00000507944 TRIM52Q96A61 297 aa31.41■■■□□ 2.62
CLDND1-216ENST00000507944 HFM1A2PYH4 1435 aa31.41■■■□□ 2.62
CLDND1-216ENST00000507944 PIK3R4Q99570 1358 aa31.4■■■□□ 2.62
CLDND1-216ENST00000507944 DIP2AQ14689 1571 aa31.39■■■□□ 2.62
CLDND1-216ENST00000507944 SLAIN2Q9P270 581 aa31.36■■■□□ 2.61
CLDND1-216ENST00000507944 PHF23Q9BUL5 403 aaPredicted RBP31.35■■■□□ 2.61
CLDND1-216ENST00000507944 NCOA3Q9Y6Q9 1424 aa31.34■■■□□ 2.61
CLDND1-216ENST00000507944 ROBO1Q9Y6N7 1651 aa31.33■■■□□ 2.61
CLDND1-216ENST00000507944 C14orf37Q86TY3 774 aa31.33■■■□□ 2.61
CLDND1-216ENST00000507944 AMOTL2Q9Y2J4 779 aa31.33■■■□□ 2.61
CLDND1-216ENST00000507944 CLTCL1P53675 1640 aa31.33■■■□□ 2.61
CLDND1-216ENST00000507944 TRPM2O94759 1503 aa31.33■■■□□ 2.61
CLDND1-216ENST00000507944 SLC4A1APQ9BWU0 796 aaKnown RBP31.31■■■□□ 2.6
CLDND1-216ENST00000507944 PTPRUQ92729 1446 aa31.29■■■□□ 2.6
CLDND1-216ENST00000507944 KIF1BO60333 1816 aa31.28■■■□□ 2.6
CLDND1-216ENST00000507944 SETBP1Q9Y6X0 1596 aa31.27■■■□□ 2.6
CLDND1-216ENST00000507944 C19orf44Q9H6X5 657 aa31.27■■■□□ 2.6
CLDND1-216ENST00000507944 NRXN3Q9Y4C0 1643 aa31.27■■■□□ 2.6
CLDND1-216ENST00000507944 NEXMIFQ5QGS0 1516 aa31.24■■■□□ 2.59
CLDND1-216ENST00000507944 CADPS2Q86UW7 1296 aa31.23■■■□□ 2.59
CLDND1-216ENST00000507944 ATF3P18847 181 aa31.22■■■□□ 2.59
CLDND1-216ENST00000507944 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.21■■■□□ 2.59
CLDND1-216ENST00000507944 METP08581 1390 aa31.2■■■□□ 2.59
CLDND1-216ENST00000507944 VGFO15240 615 aaPredicted RBP31.17■■■□□ 2.58
CLDND1-216ENST00000507944 PHLPP1O60346 1717 aa31.16■■■□□ 2.58
CLDND1-216ENST00000507944 XRN1Q8IZH2 1706 aaKnown RBP31.16■■■□□ 2.58
CLDND1-216ENST00000507944 FOXD1Q16676 465 aa31.15■■■□□ 2.58
CLDND1-216ENST00000507944 RPGRIP1LQ68CZ1 1315 aa31.14■■■□□ 2.58
CLDND1-216ENST00000507944 RGS17Q9UGC6 210 aaPredicted RBP31.12■■■□□ 2.57
CLDND1-216ENST00000507944 MPHOSPH9Q99550 1183 aa31.1■■■□□ 2.57
CLDND1-216ENST00000507944 JCADQ9P266 1359 aa31.09■■■□□ 2.57
CLDND1-216ENST00000507944 DCCP43146 1447 aa31.08■■■□□ 2.57
CLDND1-216ENST00000507944 BRINP3Q76B58 766 aa31.05■■■□□ 2.56
CLDND1-216ENST00000507944 COL16A1Q07092 1604 aaPredicted RBP31.05■■■□□ 2.56
CLDND1-216ENST00000507944 PPLO60437 1756 aa31.02■■■□□ 2.56
CLDND1-216ENST00000507944 CCDC144AA2RUR9 1427 aa31.02■■■□□ 2.56
CLDND1-216ENST00000507944 AHDC1Q5TGY3 1603 aaPredicted RBP31.01■■■□□ 2.55
CLDND1-216ENST00000507944 ADGRL3Q9HAR2 1447 aa31■■■□□ 2.55
CLDND1-216ENST00000507944 ACIN1Q9UKV3 1341 aaKnown RBP30.99■■■□□ 2.55
CLDND1-216ENST00000507944 SETD1AO15047 1707 aaKnown RBP30.99■■■□□ 2.55
CLDND1-216ENST00000507944 RGL3Q3MIN7 710 aa30.99■■■□□ 2.55
CLDND1-216ENST00000507944 MST1RQ04912 1400 aa30.98■■■□□ 2.55
CLDND1-216ENST00000507944 SETD5Q9C0A6 1442 aa30.97■■■□□ 2.55
CLDND1-216ENST00000507944 ROBO2Q9HCK4 1378 aa30.95■■■□□ 2.55
CLDND1-216ENST00000507944 POTEAQ6S8J7 498 aa30.95■■■□□ 2.55
CLDND1-216ENST00000507944 PTCH1Q13635 1447 aa30.95■■■□□ 2.54
CLDND1-216ENST00000507944 SPATA31A6Q5VVP1 1343 aa30.95■■■□□ 2.54
CLDND1-216ENST00000507944 ADGRF5Q8IZF2 1346 aa30.94■■■□□ 2.54
CLDND1-216ENST00000507944 ASXL1Q8IXJ9 1541 aa30.93■■■□□ 2.54
CLDND1-216ENST00000507944 NALCNQ8IZF0 1738 aa30.93■■■□□ 2.54
CLDND1-216ENST00000507944 SPATA31E1Q6ZUB1 1445 aa30.93■■■□□ 2.54
CLDND1-216ENST00000507944 ANKRD30BQ9BXX2 1392 aa30.9■■■□□ 2.54
CLDND1-216ENST00000507944 PRAG1Q86YV5 1406 aa30.9■■■□□ 2.54
CLDND1-216ENST00000507944 SHPRHQ149N8 1683 aa30.87■■■□□ 2.53
CLDND1-216ENST00000507944 MEX3CQ5U5Q3 659 aaKnown RBP30.86■■■□□ 2.53
CLDND1-216ENST00000507944 LRP6O75581 1613 aa30.86■■■□□ 2.53
CLDND1-216ENST00000507944 NHSL1Q5SYE7 1610 aa30.84■■■□□ 2.53
CLDND1-216ENST00000507944 C1orf167Q5SNV9 1468 aa30.84■■■□□ 2.53
CLDND1-216ENST00000507944 RAB3GAP2Q9H2M9 1393 aa30.84■■■□□ 2.53
CLDND1-216ENST00000507944 DDX17Q92841 729 aaKnown RBP30.84■■■□□ 2.53
CLDND1-216ENST00000507944 LRRC59Q96AG4 307 aaKnown RBP30.84■■■□□ 2.53
CLDND1-216ENST00000507944 IFT172Q9UG01 1749 aa30.83■■■□□ 2.53
CLDND1-216ENST00000507944 STK26Q9P289 416 aa30.81■■■□□ 2.52
CLDND1-216ENST00000507944 NUTM2BA6NNL0 878 aaPredicted RBP30.8■■■□□ 2.52
CLDND1-216ENST00000507944 NUTM2EB1AL46 878 aaPredicted RBP30.8■■■□□ 2.52
CLDND1-216ENST00000507944 NUTM2AQ8IVF1 878 aaPredicted RBP30.8■■■□□ 2.52
CLDND1-216ENST00000507944 ORAI2Q96SN7 254 aa30.79■■■□□ 2.52
CLDND1-216ENST00000507944 TMEM132EQ6IEE7 984 aa30.78■■■□□ 2.52
CLDND1-216ENST00000507944 LRPPRCP42704 1394 aaKnown RBP30.77■■■□□ 2.52
CLDND1-216ENST00000507944 PIK3C2GO75747 1445 aa30.76■■■□□ 2.51
CLDND1-216ENST00000507944 ZNF772Q68DY9 489 aaPredicted RBP30.75■■■□□ 2.51
CLDND1-216ENST00000507944 WAPLQ7Z5K2 1190 aa30.75■■■□□ 2.51
CLDND1-216ENST00000507944 ABCC11Q96J66 1382 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms